Protein–RNA interactions for Protein: Q6PJ69

TRIM65, Tripartite motif-containing protein 65, humanhuman

Predictions only

Length 517 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM65Q6PJ69 SRR-201ENST00000344595 2728 ntAPPRIS P1 TSL 1 (best) BASIC26.9■■□□□ 1.9
TRIM65Q6PJ69 SPATA33-209ENST00000579310 1490 ntAPPRIS ALT2 TSL 2 BASIC26.9■■□□□ 1.9
TRIM65Q6PJ69 HS3ST6-201ENST00000454677 1273 ntAPPRIS P1 TSL 1 (best) BASIC26.9■■□□□ 1.9
TRIM65Q6PJ69 NHLRC4-201ENST00000424439 2097 ntAPPRIS P1 TSL 3 BASIC26.89■■□□□ 1.9
TRIM65Q6PJ69 RILPL1-205ENST00000636882 2258 ntTSL 5 BASIC26.89■■□□□ 1.9
TRIM65Q6PJ69 CNNM2-201ENST00000369875 2059 ntTSL 1 (best) BASIC26.89■■□□□ 1.89
TRIM65Q6PJ69 ATP8B2-201ENST00000368487 1523 ntTSL 1 (best) BASIC26.89■■□□□ 1.89
TRIM65Q6PJ69 PICALM-202ENST00000393346 2340 ntAPPRIS P3 TSL 1 (best) BASIC26.88■■□□□ 1.89
TRIM65Q6PJ69 SNAI3-AS1-204ENST00000567997 2048 ntBASIC26.88■■□□□ 1.89
TRIM65Q6PJ69 SP8-202ENST00000418710 1618 ntAPPRIS ALT2 TSL 1 (best) BASIC26.87■■□□□ 1.89
TRIM65Q6PJ69 TMEM185A-208ENST00000611119 2662 ntTSL 2 BASIC26.87■■□□□ 1.89
TRIM65Q6PJ69 RP9-201ENST00000297157 1121 ntAPPRIS P2 TSL 1 (best) BASIC26.87■■□□□ 1.89
TRIM65Q6PJ69 ING2-201ENST00000302327 1189 ntAPPRIS P1 TSL 1 (best) BASIC26.87■■□□□ 1.89
TRIM65Q6PJ69 TSPAN4-207ENST00000397411 1025 ntAPPRIS P1 TSL 2 BASIC26.87■■□□□ 1.89
TRIM65Q6PJ69 BICDL2-203ENST00000572449 1984 ntAPPRIS P1 TSL 5 BASIC26.87■■□□□ 1.89
TRIM65Q6PJ69 SNHG7-204ENST00000447221 2157 ntTSL 2 BASIC26.86■■□□□ 1.89
TRIM65Q6PJ69 AC092803.2-201ENST00000564287 1899 ntBASIC26.86■■□□□ 1.89
TRIM65Q6PJ69 RNF166-209ENST00000567844 633 ntTSL 5 BASIC26.86■■□□□ 1.89
TRIM65Q6PJ69 ARPC2-201ENST00000295685 1605 ntAPPRIS P1 TSL 1 (best) BASIC26.86■■□□□ 1.89
TRIM65Q6PJ69 RNF175-201ENST00000347063 1604 ntAPPRIS P1 TSL 1 (best) BASIC26.86■■□□□ 1.89
TRIM65Q6PJ69 WHAMMP3-201ENST00000611636 1609 ntBASIC26.86■■□□□ 1.89
TRIM65Q6PJ69 GTPBP3-203ENST00000361619 1894 ntTSL 2 BASIC26.85■■□□□ 1.89
TRIM65Q6PJ69 ANKRD9-205ENST00000560748 1413 ntAPPRIS P1 TSL 2 BASIC26.85■■□□□ 1.89
TRIM65Q6PJ69 HES6-205ENST00000409356 528 ntTSL 2 BASIC26.85■■□□□ 1.89
TRIM65Q6PJ69 AGAP1-202ENST00000336665 5427 ntAPPRIS P3 TSL 1 (best) BASIC26.84■■□□□ 1.89
TRIM65Q6PJ69 SPIRE2-205ENST00000563972 1823 ntTSL 1 (best) BASIC26.84■■□□□ 1.89
TRIM65Q6PJ69 AURKAIP1-203ENST00000338370 1072 ntAPPRIS P1 TSL 1 (best) BASIC26.84■■□□□ 1.89
TRIM65Q6PJ69 AC008813.1-201ENST00000536597 885 ntBASIC26.84■■□□□ 1.89
TRIM65Q6PJ69 EZH2-206ENST00000478654 2522 ntTSL 5 BASIC26.84■■□□□ 1.89
TRIM65Q6PJ69 RFWD2-201ENST00000308769 2124 ntTSL 1 (best) BASIC26.84■■□□□ 1.89
TRIM65Q6PJ69 GADD45G-201ENST00000252506 1065 ntAPPRIS P1 TSL 1 (best) BASIC26.83■■□□□ 1.89
TRIM65Q6PJ69 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC26.83■■□□□ 1.89
TRIM65Q6PJ69 NRG1-210ENST00000520407 1955 ntTSL 1 (best) BASIC26.83■■□□□ 1.89
TRIM65Q6PJ69 CRTAP-202ENST00000449224 1811 ntAPPRIS ALT2 TSL 2 BASIC26.83■■□□□ 1.89
TRIM65Q6PJ69 PRR5-202ENST00000336985 1878 ntAPPRIS P1 TSL 1 (best) BASIC26.83■■□□□ 1.88
TRIM65Q6PJ69 C9orf50-201ENST00000372478 1620 ntAPPRIS P2 TSL 2 BASIC26.83■■□□□ 1.88
TRIM65Q6PJ69 CR559946.2-201ENST00000623684 991 ntBASIC26.82■■□□□ 1.88
TRIM65Q6PJ69 ARMC10-202ENST00000323716 2635 ntTSL 1 (best) BASIC26.82■■□□□ 1.88
TRIM65Q6PJ69 PABPN1-202ENST00000397276 2768 ntAPPRIS ALT1 TSL 1 (best) BASIC26.81■■□□□ 1.88
TRIM65Q6PJ69 SOWAHD-201ENST00000343905 1552 ntAPPRIS P1 BASIC26.81■■□□□ 1.88
TRIM65Q6PJ69 CTXN1-201ENST00000318978 1274 ntAPPRIS P1 TSL 1 (best) BASIC26.81■■□□□ 1.88
TRIM65Q6PJ69 AGPS-202ENST00000409888 815 ntTSL 4 BASIC26.81■■□□□ 1.88
TRIM65Q6PJ69 AC010907.1-201ENST00000441632 807 ntTSL 3 BASIC26.81■■□□□ 1.88
TRIM65Q6PJ69 TRIM52-AS1-203ENST00000509252 529 ntTSL 3 BASIC26.81■■□□□ 1.88
TRIM65Q6PJ69 U2AF2-206ENST00000590551 1104 ntTSL 3 BASIC26.81■■□□□ 1.88
TRIM65Q6PJ69 PRR35-201ENST00000409413 2216 ntAPPRIS P1 TSL 1 (best) BASIC26.81■■□□□ 1.88
TRIM65Q6PJ69 AP004609.3-201ENST00000610705 1884 ntBASIC26.81■■□□□ 1.88
TRIM65Q6PJ69 TBX1-201ENST00000329705 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC26.81■■□□□ 1.88
TRIM65Q6PJ69 LACTBL1-202ENST00000618559 1500 ntAPPRIS ALT2 TSL 5 BASIC26.8■■□□□ 1.88
TRIM65Q6PJ69 ARPC2-202ENST00000315717 1505 ntAPPRIS P1 TSL 1 (best) BASIC26.8■■□□□ 1.88
TRIM65Q6PJ69 USP25-203ENST00000351097 2158 ntTSL 1 (best) BASIC26.8■■□□□ 1.88
TRIM65Q6PJ69 EGR4-201ENST00000436467 2377 ntAPPRIS ALT2 TSL 1 (best) BASIC26.79■■□□□ 1.88
TRIM65Q6PJ69 LAGE3-201ENST00000357360 949 ntAPPRIS P1 TSL 1 (best) BASIC26.79■■□□□ 1.88
TRIM65Q6PJ69 SURF1-201ENST00000371974 1093 ntAPPRIS P1 TSL 1 (best) BASIC26.79■■□□□ 1.88
TRIM65Q6PJ69 SURF1-205ENST00000615505 991 ntTSL 1 (best) BASIC26.79■■□□□ 1.88
TRIM65Q6PJ69 ZC3H14-202ENST00000302216 2560 ntTSL 1 (best) BASIC26.78■■□□□ 1.88
TRIM65Q6PJ69 POLR3H-201ENST00000337566 1330 ntTSL 1 (best) BASIC26.78■■□□□ 1.88
TRIM65Q6PJ69 P2RX2-203ENST00000350048 1344 ntTSL 1 (best) BASIC26.78■■□□□ 1.88
TRIM65Q6PJ69 MRPL4-201ENST00000253099 1455 ntAPPRIS P2 TSL 1 (best) BASIC26.78■■□□□ 1.88
TRIM65Q6PJ69 TXNRD2-205ENST00000400525 1874 ntTSL 5 BASIC26.78■■□□□ 1.88
TRIM65Q6PJ69 SIX2-201ENST00000303077 2205 ntAPPRIS P1 TSL 1 (best) BASIC26.78■■□□□ 1.88
TRIM65Q6PJ69 TRIOBP-203ENST00000403663 2324 ntAPPRIS ALT2 TSL 1 (best) BASIC26.77■■□□□ 1.88
TRIM65Q6PJ69 CEBPA-AS1-201ENST00000592982 2198 ntBASIC26.77■■□□□ 1.88
TRIM65Q6PJ69 PPAN-202ENST00000393793 1575 ntTSL 5 BASIC26.77■■□□□ 1.88
TRIM65Q6PJ69 DHRS13-203ENST00000426464 1569 ntTSL 2 BASIC26.77■■□□□ 1.88
TRIM65Q6PJ69 MIR219A2-201ENST00000608502 1504 ntBASIC26.77■■□□□ 1.88
TRIM65Q6PJ69 MTMR1-214ENST00000542156 1227 ntTSL 1 (best) BASIC26.77■■□□□ 1.88
TRIM65Q6PJ69 AC148477.6-201ENST00000623746 465 ntBASIC26.77■■□□□ 1.88
TRIM65Q6PJ69 AC013394.1-201ENST00000629685 808 ntAPPRIS P1 TSL 5 BASIC26.77■■□□□ 1.88
TRIM65Q6PJ69 KAZALD1-201ENST00000370200 1913 ntAPPRIS P1 TSL 1 (best) BASIC26.77■■□□□ 1.88
TRIM65Q6PJ69 NPAS3-206ENST00000548645 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC26.76■■□□□ 1.88
TRIM65Q6PJ69 ABHD12-202ENST00000376542 1725 ntTSL 1 (best) BASIC26.76■■□□□ 1.88
TRIM65Q6PJ69 DYRK1B-201ENST00000323039 2535 ntAPPRIS P3 TSL 1 (best) BASIC26.76■■□□□ 1.87
TRIM65Q6PJ69 HLA-V-202ENST00000446817 847 ntBASIC26.76■■□□□ 1.87
TRIM65Q6PJ69 AC092902.2-221ENST00000628476 965 ntTSL 5 BASIC26.76■■□□□ 1.87
TRIM65Q6PJ69 DVL1-201ENST00000378888 3239 ntAPPRIS ALT1 TSL 5 BASIC26.76■■□□□ 1.87
TRIM65Q6PJ69 HOXA4-204ENST00000610970 1728 ntAPPRIS P1 TSL 1 (best) BASIC26.76■■□□□ 1.87
TRIM65Q6PJ69 ATG16L2-201ENST00000321297 2243 ntAPPRIS P1 TSL 1 (best) BASIC26.75■■□□□ 1.87
TRIM65Q6PJ69 LSM6-202ENST00000502781 1352 ntAPPRIS P1 TSL 1 (best) BASIC26.75■■□□□ 1.87
TRIM65Q6PJ69 SLC35A2-207ENST00000445167 1739 ntTSL 1 (best) BASIC26.75■■□□□ 1.87
TRIM65Q6PJ69 CRELD2-203ENST00000404488 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC26.75■■□□□ 1.87
TRIM65Q6PJ69 GYG2-205ENST00000398806 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC26.75■■□□□ 1.87
TRIM65Q6PJ69 RNF166-201ENST00000312838 1883 ntAPPRIS P1 TSL 1 (best) BASIC26.74■■□□□ 1.87
TRIM65Q6PJ69 IL17RE-203ENST00000421412 2158 ntAPPRIS ALT2 TSL 1 (best) BASIC26.74■■□□□ 1.87
TRIM65Q6PJ69 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC26.74■■□□□ 1.87
TRIM65Q6PJ69 PDIA6-201ENST00000272227 2338 ntAPPRIS P3 TSL 1 (best) BASIC26.74■■□□□ 1.87
TRIM65Q6PJ69 EPM2A-209ENST00000638262 2679 ntTSL 1 (best) BASIC26.74■■□□□ 1.87
TRIM65Q6PJ69 SLC16A11-202ENST00000447225 1779 ntAPPRIS ALT2 TSL 5 BASIC26.74■■□□□ 1.87
TRIM65Q6PJ69 AC142472.1-201ENST00000612013 1741 ntBASIC26.73■■□□□ 1.87
TRIM65Q6PJ69 GNPTG-204ENST00000527137 386 ntTSL 2 BASIC26.73■■□□□ 1.87
TRIM65Q6PJ69 LINC01896-206ENST00000575722 1256 ntTSL 2 BASIC26.73■■□□□ 1.87
TRIM65Q6PJ69 SLC25A23-203ENST00000334510 1424 ntTSL 1 (best) BASIC26.73■■□□□ 1.87
TRIM65Q6PJ69 BTBD6-203ENST00000392554 2176 ntAPPRIS P2 TSL 1 (best) BASIC26.73■■□□□ 1.87
TRIM65Q6PJ69 PDK1-202ENST00000392571 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC26.72■■□□□ 1.87
TRIM65Q6PJ69 MACF1-219ENST00000484793 834 ntTSL 2 BASIC26.72■■□□□ 1.87
TRIM65Q6PJ69 CHST11-203ENST00000547956 936 ntTSL 2 BASIC26.72■■□□□ 1.87
TRIM65Q6PJ69 MIR3648-2-201ENST00000581792 180 ntBASIC26.72■■□□□ 1.87
TRIM65Q6PJ69 MIR3648-1-201ENST00000615959 180 ntBASIC26.72■■□□□ 1.87
TRIM65Q6PJ69 MBD3-202ENST00000434436 2439 ntAPPRIS P1 TSL 1 (best) BASIC26.72■■□□□ 1.87
TRIM65Q6PJ69 TTC3-225ENST00000540756 2025 ntTSL 2 BASIC26.72■■□□□ 1.87
Retrieved 100 of 98,524 protein–RNA pairs in 21.1 ms