Protein–RNA interactions for Protein: Q6NWY9

PRPF40B, Pre-mRNA-processing factor 40 homolog B, humanhuman

Known RBP Predictions only

Length 871 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40BQ6NWY9 TMEM120A-214ENST00000493111 1456 ntAPPRIS P1 TSL 1 (best) BASIC31.02■■■□□ 2.56
PRPF40BQ6NWY9 RHOBTB3-206ENST00000506817 1432 ntTSL 2 BASIC31.02■■■□□ 2.56
PRPF40BQ6NWY9 TSPY4-202ENST00000426950 1179 ntAPPRIS P5 TSL 5 BASIC31.02■■■□□ 2.56
PRPF40BQ6NWY9 AC103834.1-201ENST00000520383 144 ntBASIC31.02■■■□□ 2.56
PRPF40BQ6NWY9 MDFIC-206ENST00000448022 484 ntTSL 2 BASIC31.01■■■□□ 2.55
PRPF40BQ6NWY9 TPI1-210ENST00000613953 1460 ntTSL 1 (best) BASIC31.01■■■□□ 2.55
PRPF40BQ6NWY9 NRBF2-202ENST00000435510 1816 ntTSL 2 BASIC31.01■■■□□ 2.55
PRPF40BQ6NWY9 IGFBP7-201ENST00000295666 1427 ntAPPRIS P3 TSL 1 (best) BASIC31■■■□□ 2.55
PRPF40BQ6NWY9 CIB2-202ENST00000539011 1511 ntTSL 1 (best) BASIC31■■■□□ 2.55
PRPF40BQ6NWY9 AC145124.1-201ENST00000528514 1361 ntTSL 2 BASIC31■■■□□ 2.55
PRPF40BQ6NWY9 SHARPIN-202ENST00000398712 1765 ntAPPRIS P1 TSL 1 (best) BASIC31■■■□□ 2.55
PRPF40BQ6NWY9 TIMM29-201ENST00000270502 1425 ntAPPRIS P1 TSL 1 (best) BASIC30.98■■■□□ 2.55
PRPF40BQ6NWY9 POTEF-201ENST00000361163 1586 ntTSL 5 BASIC30.98■■■□□ 2.55
PRPF40BQ6NWY9 H2AFY-204ENST00000423969 924 ntTSL 2 BASIC30.98■■■□□ 2.55
PRPF40BQ6NWY9 PLA2G10-201ENST00000438167 1000 ntAPPRIS P1 TSL 1 (best) BASIC30.98■■■□□ 2.55
PRPF40BQ6NWY9 AC139795.1-202ENST00000500444 432 ntBASIC30.98■■■□□ 2.55
PRPF40BQ6NWY9 MIR6765-201ENST00000614092 87 ntBASIC30.98■■■□□ 2.55
PRPF40BQ6NWY9 AC019069.1-201ENST00000610008 1333 ntBASIC30.98■■■□□ 2.55
PRPF40BQ6NWY9 FGF20-201ENST00000180166 1688 ntAPPRIS P1 TSL 1 (best) BASIC30.97■■■□□ 2.55
PRPF40BQ6NWY9 TMEM151B-201ENST00000438774 1140 ntAPPRIS ALT2 TSL 3 BASIC30.97■■■□□ 2.55
PRPF40BQ6NWY9 PVT1_1.1-201ENST00000615125 194 ntBASIC30.97■■■□□ 2.55
PRPF40BQ6NWY9 SDCCAG3-201ENST00000298537 2314 ntTSL 1 (best) BASIC30.97■■■□□ 2.55
PRPF40BQ6NWY9 ACTR3B-201ENST00000256001 2216 ntAPPRIS P1 TSL 1 (best) BASIC30.96■■■□□ 2.55
PRPF40BQ6NWY9 YBX1P4-201ENST00000392794 808 ntBASIC30.96■■■□□ 2.55
PRPF40BQ6NWY9 SMKR1-201ENST00000462322 1035 ntAPPRIS P1 TSL 1 (best) BASIC30.96■■■□□ 2.55
PRPF40BQ6NWY9 DNPEP-201ENST00000273075 2425 ntAPPRIS P3 TSL 1 (best) BASIC30.96■■■□□ 2.55
PRPF40BQ6NWY9 HES6-204ENST00000409182 863 ntTSL 2 BASIC30.95■■■□□ 2.55
PRPF40BQ6NWY9 AC138647.1-201ENST00000427937 648 ntAPPRIS P1 TSL 5 BASIC30.95■■■□□ 2.55
PRPF40BQ6NWY9 PKNOX2-AS1-201ENST00000532316 586 ntTSL 3 BASIC30.95■■■□□ 2.55
PRPF40BQ6NWY9 AC131212.1-201ENST00000613771 668 ntBASIC30.95■■■□□ 2.55
PRPF40BQ6NWY9 TCEA1-213ENST00000640041 1171 ntTSL 5 BASIC30.95■■■□□ 2.55
PRPF40BQ6NWY9 FKBP1A-205ENST00000439640 1583 ntTSL 3 BASIC30.95■■■□□ 2.54
PRPF40BQ6NWY9 FKBP1B-202ENST00000380991 1010 ntTSL 1 (best) BASIC30.94■■■□□ 2.54
PRPF40BQ6NWY9 ANKRD9-205ENST00000560748 1413 ntAPPRIS P1 TSL 2 BASIC30.94■■■□□ 2.54
PRPF40BQ6NWY9 AC008105.2-203ENST00000591361 550 ntTSL 4 BASIC30.94■■■□□ 2.54
PRPF40BQ6NWY9 RAET1E-AS1-203ENST00000606915 1210 ntTSL 1 (best) BASIC30.94■■■□□ 2.54
PRPF40BQ6NWY9 CLK2-201ENST00000355560 2120 ntAPPRIS ALT1 TSL 5 BASIC30.93■■■□□ 2.54
PRPF40BQ6NWY9 KANSL1L-207ENST00000452086 2334 ntTSL 1 (best) BASIC30.93■■■□□ 2.54
PRPF40BQ6NWY9 PFN2-211ENST00000489155 636 ntTSL 4 BASIC30.92■■■□□ 2.54
PRPF40BQ6NWY9 MIR3960-201ENST00000583311 91 ntBASIC30.92■■■□□ 2.54
PRPF40BQ6NWY9 CHST14-202ENST00000559991 1968 ntTSL 5 BASIC30.92■■■□□ 2.54
PRPF40BQ6NWY9 PHF20L1-207ENST00000395379 1998 ntTSL 5 BASIC30.91■■■□□ 2.54
PRPF40BQ6NWY9 GUSBP5-201ENST00000418136 578 ntBASIC30.9■■■□□ 2.54
PRPF40BQ6NWY9 DDAH2-212ENST00000375789 1688 ntAPPRIS P1 TSL 2 BASIC30.9■■■□□ 2.54
PRPF40BQ6NWY9 DDAH2-213ENST00000375792 1688 ntAPPRIS P1 TSL 1 (best) BASIC30.9■■■□□ 2.54
PRPF40BQ6NWY9 ANKS1B-203ENST00000341752 2115 ntTSL 2 BASIC30.89■■■□□ 2.54
PRPF40BQ6NWY9 PPP1CC-208ENST00000551676 1581 ntTSL 2 BASIC30.89■■■□□ 2.54
PRPF40BQ6NWY9 MDK-203ENST00000395566 828 ntAPPRIS P2 TSL 1 (best) BASIC30.89■■■□□ 2.54
PRPF40BQ6NWY9 AL354928.1-201ENST00000438380 617 ntTSL 2 BASIC30.89■■■□□ 2.54
PRPF40BQ6NWY9 AL355490.1-201ENST00000445808 805 ntTSL 3 BASIC30.89■■■□□ 2.54
PRPF40BQ6NWY9 FAM159A-204ENST00000517870 748 ntAPPRIS P1 TSL 1 (best) BASIC30.89■■■□□ 2.54
PRPF40BQ6NWY9 THA1P-201ENST00000590384 1145 ntBASIC30.89■■■□□ 2.54
PRPF40BQ6NWY9 OR2A1-AS1-204ENST00000470435 602 ntBASIC30.88■■■□□ 2.53
PRPF40BQ6NWY9 LINC01233-202ENST00000598832 568 ntTSL 2 BASIC30.88■■■□□ 2.53
PRPF40BQ6NWY9 RBM42-205ENST00000589871 1487 ntTSL 5 BASIC30.88■■■□□ 2.53
PRPF40BQ6NWY9 HYI-210ENST00000486909 905 ntTSL 5 BASIC30.87■■■□□ 2.53
PRPF40BQ6NWY9 DRD5P2-201ENST00000421395 2012 ntBASIC30.86■■■□□ 2.53
PRPF40BQ6NWY9 FOXP1-201ENST00000318779 843 ntTSL 1 (best) BASIC30.86■■■□□ 2.53
PRPF40BQ6NWY9 PFDN2-201ENST00000368010 677 ntAPPRIS P1 TSL 1 (best) BASIC30.86■■■□□ 2.53
PRPF40BQ6NWY9 GUCD1-207ENST00000447813 895 ntTSL 3 BASIC30.86■■■□□ 2.53
PRPF40BQ6NWY9 HAGHL-205ENST00000561546 1041 ntTSL 2 BASIC30.86■■■□□ 2.53
PRPF40BQ6NWY9 PKIG-206ENST00000372892 1338 ntAPPRIS P1 TSL 2 BASIC30.86■■■□□ 2.53
PRPF40BQ6NWY9 SMARCD3-203ENST00000392811 2018 ntTSL 1 (best) BASIC30.86■■■□□ 2.53
PRPF40BQ6NWY9 F8A3-201ENST00000622749 1759 ntAPPRIS P1 BASIC30.85■■■□□ 2.53
PRPF40BQ6NWY9 AC018755.3-202ENST00000596210 929 ntBASIC30.85■■■□□ 2.53
PRPF40BQ6NWY9 MPP6-203ENST00000409761 1703 ntTSL 5 BASIC30.84■■■□□ 2.53
PRPF40BQ6NWY9 RAB40C-201ENST00000248139 2699 ntAPPRIS P1 TSL 1 (best) BASIC30.84■■■□□ 2.53
PRPF40BQ6NWY9 VEGFA-209ENST00000425836 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC30.84■■■□□ 2.53
PRPF40BQ6NWY9 NTHL1-201ENST00000219066 1067 ntAPPRIS P1 TSL 1 (best) BASIC30.84■■■□□ 2.53
PRPF40BQ6NWY9 S100A6-201ENST00000368719 665 ntAPPRIS P1 TSL 1 (best) BASIC30.84■■■□□ 2.53
PRPF40BQ6NWY9 RIPPLY2-202ENST00000369689 664 ntAPPRIS P2 TSL 1 (best) BASIC30.84■■■□□ 2.53
PRPF40BQ6NWY9 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC30.84■■■□□ 2.53
PRPF40BQ6NWY9 FAM173A-202ENST00000564000 1088 ntAPPRIS ALT2 TSL 2 BASIC30.84■■■□□ 2.53
PRPF40BQ6NWY9 MIR4508-201ENST00000584178 70 ntBASIC30.84■■■□□ 2.53
PRPF40BQ6NWY9 EMID1-203ENST00000404820 2118 ntTSL 5 BASIC30.83■■■□□ 2.53
PRPF40BQ6NWY9 TMEM9-201ENST00000367330 1959 ntAPPRIS P3 TSL 1 (best) BASIC30.83■■■□□ 2.53
PRPF40BQ6NWY9 PLSCR3-209ENST00000574401 2032 ntAPPRIS P1 TSL 1 (best) BASIC30.83■■■□□ 2.53
PRPF40BQ6NWY9 GSR-206ENST00000546342 1482 ntAPPRIS ALT2 TSL 1 (best) BASIC30.82■■■□□ 2.53
PRPF40BQ6NWY9 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC30.82■■■□□ 2.52
PRPF40BQ6NWY9 VSTM2A-202ENST00000402613 1076 ntTSL 2 BASIC30.82■■■□□ 2.52
PRPF40BQ6NWY9 TNFSF12-201ENST00000293825 1553 ntAPPRIS P1 TSL 1 (best) BASIC30.82■■■□□ 2.52
PRPF40BQ6NWY9 GPR75-ASB3-201ENST00000406625 2113 ntAPPRIS P1 TSL 2 BASIC30.82■■■□□ 2.52
PRPF40BQ6NWY9 COMMD7-201ENST00000278980 1900 ntAPPRIS P3 TSL 1 (best) BASIC30.81■■■□□ 2.52
PRPF40BQ6NWY9 ARPC2-201ENST00000295685 1605 ntAPPRIS P1 TSL 1 (best) BASIC30.81■■■□□ 2.52
PRPF40BQ6NWY9 IGFBP6-201ENST00000301464 1169 ntAPPRIS P2 TSL 1 (best) BASIC30.81■■■□□ 2.52
PRPF40BQ6NWY9 C9orf47-202ENST00000375850 859 ntAPPRIS ALT2 TSL 3 BASIC30.81■■■□□ 2.52
PRPF40BQ6NWY9 EPM2A-202ENST00000435470 1278 ntTSL 1 (best) BASIC30.81■■■□□ 2.52
PRPF40BQ6NWY9 BARX1-202ENST00000401724 1323 ntTSL 1 (best) BASIC30.8■■■□□ 2.52
PRPF40BQ6NWY9 RASGEF1B-211ENST00000514050 537 ntTSL 2 BASIC30.8■■■□□ 2.52
PRPF40BQ6NWY9 MNX1-201ENST00000252971 2174 ntAPPRIS P3 TSL 1 (best) BASIC30.8■■■□□ 2.52
PRPF40BQ6NWY9 MTCH1-201ENST00000373616 2006 ntTSL 1 (best) BASIC30.8■■■□□ 2.52
PRPF40BQ6NWY9 GNAS-207ENST00000354359 1975 ntTSL 1 (best) BASIC30.79■■■□□ 2.52
PRPF40BQ6NWY9 GNAS-210ENST00000371085 1972 ntTSL 1 (best) BASIC30.79■■■□□ 2.52
PRPF40BQ6NWY9 AL590094.1-201ENST00000635581 706 ntTSL 2 BASIC30.79■■■□□ 2.52
PRPF40BQ6NWY9 ZDHHC23-206ENST00000498275 2055 ntAPPRIS ALT2 TSL 2 BASIC30.78■■■□□ 2.52
PRPF40BQ6NWY9 MFSD12-202ENST00000389395 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC30.78■■■□□ 2.52
PRPF40BQ6NWY9 EVA1B-201ENST00000270824 1054 ntAPPRIS P1 TSL 2 BASIC30.78■■■□□ 2.52
PRPF40BQ6NWY9 ZIC2-201ENST00000376335 2983 ntAPPRIS P1 TSL 1 (best) BASIC30.78■■■□□ 2.52
PRPF40BQ6NWY9 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC30.78■■■□□ 2.52
PRPF40BQ6NWY9 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC30.78■■■□□ 2.52
Retrieved 100 of 98,524 protein–RNA pairs in 14.4 ms