Protein–RNA interactions for Protein: Q15599

SLC9A3R2, Na(+)/H(+) exchange regulatory cofactor NHE-RF2, humanhuman

Predictions only

Length 337 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC9A3R2Q15599 VEGFA-202ENST00000324450 954 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
SLC9A3R2Q15599 VEGFA-203ENST00000372055 1286 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
SLC9A3R2Q15599 VEGFA-213ENST00000482630 1146 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
SLC9A3R2Q15599 UBALD1-203ENST00000587649 707 ntTSL 3 BASIC20.86■□□□□ 0.93
SLC9A3R2Q15599 VEGFA-227ENST00000615393 984 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
SLC9A3R2Q15599 VEGFA-228ENST00000617771 1116 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
SLC9A3R2Q15599 VEGFA-229ENST00000621747 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
SLC9A3R2Q15599 VEGFA-230ENST00000640482 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
SLC9A3R2Q15599 VEGFA-232ENST00000640653 1170 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
SLC9A3R2Q15599 COQ2-202ENST00000311469 1641 ntAPPRIS P2 TSL 1 (best) BASIC20.86■□□□□ 0.93
SLC9A3R2Q15599 CDK9-201ENST00000373264 2463 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
SLC9A3R2Q15599 ARMC10-204ENST00000425331 2443 ntTSL 2 BASIC20.85■□□□□ 0.93
SLC9A3R2Q15599 HTR6-201ENST00000289753 1984 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
SLC9A3R2Q15599 BARX1-201ENST00000253968 1533 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
SLC9A3R2Q15599 RPS20-211ENST00000524349 752 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
SLC9A3R2Q15599 JMJD8-202ENST00000562111 823 ntTSL 2 BASIC20.85■□□□□ 0.93
SLC9A3R2Q15599 DLX2-202ENST00000466293 1852 ntTSL 2 BASIC20.85■□□□□ 0.93
SLC9A3R2Q15599 TSPOAP1-AS1-205ENST00000580022 2337 ntTSL 2 BASIC20.84■□□□□ 0.93
SLC9A3R2Q15599 LYPLA1-215ENST00000618914 2482 ntTSL 5 BASIC20.84■□□□□ 0.93
SLC9A3R2Q15599 PIGX-201ENST00000296333 953 ntAPPRIS ALT2 TSL 2 BASIC20.84■□□□□ 0.93
SLC9A3R2Q15599 SRP68-213ENST00000629930 165 ntTSL 5 BASIC20.84■□□□□ 0.93
SLC9A3R2Q15599 BTBD6-204ENST00000463376 2195 ntAPPRIS ALT2 TSL 2 BASIC20.84■□□□□ 0.93
SLC9A3R2Q15599 EID2-201ENST00000390658 1629 ntAPPRIS P1 BASIC20.84■□□□□ 0.93
SLC9A3R2Q15599 C8orf58-202ENST00000409586 2021 ntAPPRIS ALT2 TSL 2 BASIC20.83■□□□□ 0.93
SLC9A3R2Q15599 MAGI2-208ENST00000522391 4878 ntAPPRIS ALT2 TSL 5 BASIC20.83■□□□□ 0.93
SLC9A3R2Q15599 CYS1-201ENST00000381813 2738 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
SLC9A3R2Q15599 NME2-205ENST00000512737 826 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
SLC9A3R2Q15599 D2HGDH-203ENST00000403782 2208 ntTSL 2 BASIC20.83■□□□□ 0.93
SLC9A3R2Q15599 PIM3-201ENST00000360612 2369 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
SLC9A3R2Q15599 UBE2J2-202ENST00000349431 1733 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
SLC9A3R2Q15599 RAD21-AS1-201ENST00000521487 2010 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
SLC9A3R2Q15599 ST6GALNAC2-201ENST00000225276 2170 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
SLC9A3R2Q15599 TBC1D10A-201ENST00000215790 2077 ntAPPRIS P3 TSL 1 (best) BASIC20.82■□□□□ 0.92
SLC9A3R2Q15599 ANKRD16-201ENST00000191063 1567 ntTSL 3 BASIC20.82■□□□□ 0.92
SLC9A3R2Q15599 NPC2-207ENST00000555619 1035 ntAPPRIS P2 TSL 1 (best) BASIC20.82■□□□□ 0.92
SLC9A3R2Q15599 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC20.82■□□□□ 0.92
SLC9A3R2Q15599 OTUD5-201ENST00000156084 2740 ntAPPRIS P3 TSL 1 (best) BASIC20.82■□□□□ 0.92
SLC9A3R2Q15599 NAGS-201ENST00000293404 2182 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
SLC9A3R2Q15599 MYPOP-201ENST00000322217 1890 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
SLC9A3R2Q15599 ANKS3-203ENST00000450067 2272 ntTSL 5 BASIC20.81■□□□□ 0.92
SLC9A3R2Q15599 TBL1X-201ENST00000217964 5871 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
SLC9A3R2Q15599 HAS1-205ENST00000601714 2086 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
SLC9A3R2Q15599 HABP4-202ENST00000375251 2304 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
SLC9A3R2Q15599 UBA52-204ENST00000595158 743 ntAPPRIS P1 TSL 3 BASIC20.81■□□□□ 0.92
SLC9A3R2Q15599 POLR3H-201ENST00000337566 1330 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
SLC9A3R2Q15599 CLTA-207ENST00000470744 1102 ntTSL 2 BASIC20.8■□□□□ 0.92
SLC9A3R2Q15599 AC016595.1-201ENST00000559410 383 ntTSL 3 BASIC20.8■□□□□ 0.92
SLC9A3R2Q15599 FAM193A-211ENST00000637812 4885 ntAPPRIS ALT2 TSL 5 BASIC20.8■□□□□ 0.92
SLC9A3R2Q15599 CIB2-201ENST00000258930 1598 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
SLC9A3R2Q15599 PCYT2-202ENST00000538721 1765 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
SLC9A3R2Q15599 LINC00588-201ENST00000521663 1875 ntTSL 2 BASIC20.79■□□□□ 0.92
SLC9A3R2Q15599 GSR-206ENST00000546342 1482 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
SLC9A3R2Q15599 BAMBI-201ENST00000375533 1877 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
SLC9A3R2Q15599 CNNM2-201ENST00000369875 2059 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
SLC9A3R2Q15599 CDC16-211ENST00000628084 2058 ntTSL 5 BASIC20.79■□□□□ 0.92
SLC9A3R2Q15599 SLC9A3-201ENST00000264938 2584 ntAPPRIS P3 TSL 1 (best) BASIC20.79■□□□□ 0.92
SLC9A3R2Q15599 AC009690.3-201ENST00000569547 1902 ntAPPRIS P1 TSL 2 BASIC20.78■□□□□ 0.92
SLC9A3R2Q15599 MAGI2-217ENST00000629359 6704 ntTSL 5 BASIC20.78■□□□□ 0.92
SLC9A3R2Q15599 FEZ2-204ENST00000405912 1931 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
SLC9A3R2Q15599 KAT8-206ENST00000543774 1846 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
SLC9A3R2Q15599 SLC35D2-201ENST00000253270 1613 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
SLC9A3R2Q15599 GATA3-AS1-201ENST00000355358 2214 ntTSL 2 BASIC20.77■□□□□ 0.92
SLC9A3R2Q15599 AEBP2-204ENST00000398864 5099 ntAPPRIS P4 TSL 1 (best) BASIC20.77■□□□□ 0.92
SLC9A3R2Q15599 TRIM54-201ENST00000296098 2027 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
SLC9A3R2Q15599 CTBP2-211ENST00000494626 2014 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
SLC9A3R2Q15599 CPLX1-203ENST00000505203 2011 ntTSL 2 BASIC20.77■□□□□ 0.92
SLC9A3R2Q15599 RPUSD1-208ENST00000567114 1835 ntTSL 2 BASIC20.77■□□□□ 0.92
SLC9A3R2Q15599 CFAP73-201ENST00000335621 1514 ntAPPRIS P1 TSL 5 BASIC20.77■□□□□ 0.92
SLC9A3R2Q15599 AC027237.3-202ENST00000558617 1778 ntTSL 2 BASIC20.77■□□□□ 0.91
SLC9A3R2Q15599 TPT1-202ENST00000379055 948 ntTSL 2 BASIC20.76■□□□□ 0.91
SLC9A3R2Q15599 AC068134.2-201ENST00000437095 576 ntTSL 3 BASIC20.76■□□□□ 0.91
SLC9A3R2Q15599 AC073111.5-206ENST00000642087 859 ntAPPRIS P1 BASIC20.76■□□□□ 0.91
SLC9A3R2Q15599 NFKBIE-201ENST00000275015 2581 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
SLC9A3R2Q15599 FBXL8-206ENST00000519917 1460 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
SLC9A3R2Q15599 RUNX2-211ENST00000625924 1458 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
SLC9A3R2Q15599 MEIS2-204ENST00000397620 2295 ntTSL 2 BASIC20.75■□□□□ 0.91
SLC9A3R2Q15599 TMEM185A-208ENST00000611119 2662 ntTSL 2 BASIC20.75■□□□□ 0.91
SLC9A3R2Q15599 AC093323.1-202ENST00000635031 2045 ntBASIC20.75■□□□□ 0.91
SLC9A3R2Q15599 PKIG-207ENST00000372894 1191 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
SLC9A3R2Q15599 AC018755.3-201ENST00000598755 664 ntTSL 2 BASIC20.75■□□□□ 0.91
SLC9A3R2Q15599 RABL6-202ENST00000357466 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
SLC9A3R2Q15599 ZBTB25-202ENST00000555220 1440 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
SLC9A3R2Q15599 PIP5K1C-203ENST00000539785 2289 ntAPPRIS ALT2 TSL 2 BASIC20.75■□□□□ 0.91
SLC9A3R2Q15599 SRR-201ENST00000344595 2728 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
SLC9A3R2Q15599 C19orf47-202ENST00000392035 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
SLC9A3R2Q15599 S1PR4-201ENST00000246115 1565 ntAPPRIS P1 BASIC20.74■□□□□ 0.91
SLC9A3R2Q15599 FAM168B-201ENST00000389915 944 ntAPPRIS P1 TSL 3 BASIC20.74■□□□□ 0.91
SLC9A3R2Q15599 RARRES2P2-201ENST00000394842 485 ntBASIC20.74■□□□□ 0.91
SLC9A3R2Q15599 GPX1-201ENST00000419349 1106 ntBASIC20.74■□□□□ 0.91
SLC9A3R2Q15599 AC007383.2-202ENST00000435627 482 ntTSL 2 BASIC20.74■□□□□ 0.91
SLC9A3R2Q15599 AC018358.1-201ENST00000631079 1402 ntBASIC20.74■□□□□ 0.91
SLC9A3R2Q15599 TIGD3-201ENST00000309880 2012 ntAPPRIS P1 TSL 2 BASIC20.73■□□□□ 0.91
SLC9A3R2Q15599 SURF1-201ENST00000371974 1093 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
SLC9A3R2Q15599 PTPMT1-203ENST00000426530 1014 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
SLC9A3R2Q15599 SURF1-205ENST00000615505 991 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
SLC9A3R2Q15599 GTPBP3-202ENST00000358792 1951 ntAPPRIS P4 TSL 2 BASIC20.73■□□□□ 0.91
SLC9A3R2Q15599 LRIG1-202ENST00000383703 5283 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
SLC9A3R2Q15599 PABPN1-202ENST00000397276 2768 ntAPPRIS ALT1 TSL 1 (best) BASIC20.73■□□□□ 0.91
SLC9A3R2Q15599 ANKRD53-203ENST00000441349 1797 ntTSL 5 BASIC20.72■□□□□ 0.91
SLC9A3R2Q15599 C2orf88-204ENST00000409870 1441 ntAPPRIS P1 TSL 2 BASIC20.72■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 18.3 ms