Protein–RNA interactions for Protein: P49459

UBE2A, Ubiquitin-conjugating enzyme E2 A, humanhuman

Predictions only

Length 152 aa.

Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2AP49459 NRARP-201ENST00000356628 1770 ntAPPRIS P1 BASIC15.41■□□□□ 0.06
UBE2AP49459 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
UBE2AP49459 RUNX2-203ENST00000371436 1588 ntAPPRIS ALT2 TSL 5 BASIC15.41■□□□□ 0.06
UBE2AP49459 NELFB-202ENST00000634710 1887 ntAPPRIS P2 TSL 1 (best) BASIC15.4■□□□□ 0.06
UBE2AP49459 LAPTM4B-203ENST00000521545 915 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
UBE2AP49459 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
UBE2AP49459 PCSK6-216ENST00000615296 2921 ntTSL 5 BASIC15.4■□□□□ 0.06
UBE2AP49459 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC15.39■□□□□ 0.06
UBE2AP49459 NXPH3-201ENST00000328741 2179 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
UBE2AP49459 TMEM55B-202ENST00000398020 1696 ntAPPRIS ALT1 TSL 1 (best) BASIC15.39■□□□□ 0.05
UBE2AP49459 LAGE3-201ENST00000357360 949 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
UBE2AP49459 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC15.39■□□□□ 0.05
UBE2AP49459 CDPF1-201ENST00000314567 1875 ntAPPRIS P2 TSL 1 (best) BASIC15.39■□□□□ 0.05
UBE2AP49459 IRAK1-205ENST00000429936 2127 ntTSL 5 BASIC15.38■□□□□ 0.05
UBE2AP49459 SLC35D2-203ENST00000375259 1361 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
UBE2AP49459 TAZ-213ENST00000601016 1889 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
UBE2AP49459 HSPB11-201ENST00000194214 915 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
UBE2AP49459 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
UBE2AP49459 PEX7-203ENST00000541292 945 ntTSL 5 BASIC15.38■□□□□ 0.05
UBE2AP49459 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
UBE2AP49459 RPUSD1-207ENST00000565809 1918 ntTSL 2 BASIC15.38■□□□□ 0.05
UBE2AP49459 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC15.38■□□□□ 0.05
UBE2AP49459 RRAD-202ENST00000420652 1476 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
UBE2AP49459 DNMT3A-206ENST00000406659 1775 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
UBE2AP49459 NKPD1-202ENST00000589776 1950 ntAPPRIS P1 BASIC15.36■□□□□ 0.05
UBE2AP49459 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC15.36■□□□□ 0.05
UBE2AP49459 GSR-205ENST00000541648 1410 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
UBE2AP49459 ZDHHC16-204ENST00000370842 1877 ntAPPRIS ALT1 TSL 5 BASIC15.36■□□□□ 0.05
UBE2AP49459 ABL2-203ENST00000392043 2140 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
UBE2AP49459 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC15.36■□□□□ 0.05
UBE2AP49459 DUX4L13-201ENST00000554103 1267 ntBASIC15.36■□□□□ 0.05
UBE2AP49459 DUX4L15-201ENST00000611059 1267 ntBASIC15.36■□□□□ 0.05
UBE2AP49459 DUX4L11-201ENST00000611504 1267 ntBASIC15.36■□□□□ 0.05
UBE2AP49459 DUX4L12-201ENST00000614593 1267 ntBASIC15.36■□□□□ 0.05
UBE2AP49459 DUX4L23-201ENST00000615195 1269 ntBASIC15.36■□□□□ 0.05
UBE2AP49459 DUX4L24-201ENST00000617576 1269 ntBASIC15.36■□□□□ 0.05
UBE2AP49459 DUX4L22-201ENST00000618238 1269 ntBASIC15.36■□□□□ 0.05
UBE2AP49459 DUX4L20-201ENST00000619712 1269 ntBASIC15.36■□□□□ 0.05
UBE2AP49459 DUX4L14-201ENST00000621227 1267 ntBASIC15.36■□□□□ 0.05
UBE2AP49459 DUX4L21-201ENST00000622058 1269 ntBASIC15.36■□□□□ 0.05
UBE2AP49459 DUX4L10-201ENST00000622460 1267 ntBASIC15.36■□□□□ 0.05
UBE2AP49459 DUX4L25-201ENST00000624915 1269 ntBASIC15.36■□□□□ 0.05
UBE2AP49459 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
UBE2AP49459 PWWP2B-201ENST00000305233 2651 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
UBE2AP49459 TIGD3-201ENST00000309880 2012 ntAPPRIS P1 TSL 2 BASIC15.36■□□□□ 0.05
UBE2AP49459 PRR5-ARHGAP8-202ENST00000361473 2013 ntTSL 5 BASIC15.36■□□□□ 0.05
UBE2AP49459 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
UBE2AP49459 PKM-203ENST00000389093 2279 ntTSL 5 BASIC15.36■□□□□ 0.05
UBE2AP49459 THAP4-204ENST00000407315 2367 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
UBE2AP49459 AKAP8L-208ENST00000595465 1933 ntTSL 2 BASIC15.35■□□□□ 0.05
UBE2AP49459 ARHGDIG-201ENST00000219409 949 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
UBE2AP49459 ZNRF2P2-203ENST00000454624 420 ntBASIC15.35■□□□□ 0.05
UBE2AP49459 RPS2-210ENST00000530225 765 ntTSL 2 BASIC15.35■□□□□ 0.05
UBE2AP49459 AL121987.2-201ENST00000418602 1578 ntTSL 2 BASIC15.35■□□□□ 0.05
UBE2AP49459 SLC9A3R2-201ENST00000424542 2194 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
UBE2AP49459 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
UBE2AP49459 LMO2-201ENST00000257818 2294 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
UBE2AP49459 EMID1-202ENST00000404755 2049 ntTSL 5 BASIC15.34■□□□□ 0.05
UBE2AP49459 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC15.34■□□□□ 0.05
UBE2AP49459 SAE1-209ENST00000598840 1831 ntTSL 5 BASIC15.34■□□□□ 0.05
UBE2AP49459 MTMR1-202ENST00000370390 2755 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
UBE2AP49459 RCAN1-201ENST00000313806 2490 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
UBE2AP49459 CTXN1-201ENST00000318978 1274 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
UBE2AP49459 TRIM52-AS1-203ENST00000509252 529 ntTSL 3 BASIC15.34■□□□□ 0.05
UBE2AP49459 TANGO2-214ENST00000447208 2086 ntTSL 3 BASIC15.34■□□□□ 0.05
UBE2AP49459 LCNL1-201ENST00000408973 1839 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.05
UBE2AP49459 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
UBE2AP49459 ARTN-203ENST00000414809 1943 ntAPPRIS P4 TSL 3 BASIC15.33■□□□□ 0.05
UBE2AP49459 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.04
UBE2AP49459 SHF-207ENST00000560540 2062 ntTSL 5 BASIC15.33■□□□□ 0.04
UBE2AP49459 RANBP1-202ENST00000402752 1132 ntAPPRIS ALT1 TSL 1 (best) BASIC15.33■□□□□ 0.04
UBE2AP49459 AC008813.1-201ENST00000536597 885 ntBASIC15.33■□□□□ 0.04
UBE2AP49459 UBALD1-202ENST00000587615 799 ntTSL 2 BASIC15.33■□□□□ 0.04
UBE2AP49459 CACNG7-203ENST00000391767 2688 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
UBE2AP49459 RFLNA-205ENST00000546355 2354 ntAPPRIS ALT1 TSL 1 (best) BASIC15.33■□□□□ 0.04
UBE2AP49459 DHRS13-201ENST00000378895 1921 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
UBE2AP49459 UNCX-201ENST00000316333 2048 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
UBE2AP49459 CAPNS1-215ENST00000628018 1509 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.04
UBE2AP49459 BCAP31-207ENST00000458587 1810 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
UBE2AP49459 IGFBPL1-201ENST00000377694 1093 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
UBE2AP49459 AC096888.1-201ENST00000487097 565 ntTSL 4 BASIC15.32■□□□□ 0.04
UBE2AP49459 ZDHHC16-207ENST00000393760 2014 ntAPPRIS P4 TSL 1 (best) BASIC15.32■□□□□ 0.04
UBE2AP49459 ARMC10-205ENST00000428183 2445 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
UBE2AP49459 WHAMMP3-201ENST00000611636 1609 ntBASIC15.32■□□□□ 0.04
UBE2AP49459 VSIG8-201ENST00000368100 1818 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
UBE2AP49459 MEN1-204ENST00000377313 1871 ntAPPRIS P3 TSL 2 BASIC15.31■□□□□ 0.04
UBE2AP49459 DNAJB2-202ENST00000392086 1946 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
UBE2AP49459 AGPS-202ENST00000409888 815 ntTSL 4 BASIC15.31■□□□□ 0.04
UBE2AP49459 RNF166-209ENST00000567844 633 ntTSL 5 BASIC15.31■□□□□ 0.04
UBE2AP49459 TXNRD2-205ENST00000400525 1874 ntTSL 5 BASIC15.31■□□□□ 0.04
UBE2AP49459 NREP-202ENST00000379671 2581 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
UBE2AP49459 TLE6-201ENST00000246112 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
UBE2AP49459 ZNF653-201ENST00000293771 2240 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
UBE2AP49459 RHBDD2-202ENST00000318622 1878 ntTSL 2 BASIC15.3■□□□□ 0.04
UBE2AP49459 RHOC-202ENST00000339083 1418 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
UBE2AP49459 CPNE1-202ENST00000352393 2147 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
UBE2AP49459 CNNM2-201ENST00000369875 2059 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
UBE2AP49459 AJAP1-201ENST00000378190 2383 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
UBE2AP49459 KANSL2-215ENST00000553086 1830 ntTSL 5 BASIC15.3■□□□□ 0.04
UBE2AP49459 AP004609.3-201ENST00000610705 1884 ntBASIC15.3■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 48.2 ms