Protein–RNA interactions for Protein: P33552

CKS2, Cyclin-dependent kinases regulatory subunit 2, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKS2P33552 LGALS3-201ENST00000254301 1146 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CKS2P33552 AL355297.4-201ENST00000603191 1249 ntTSL 3 BASIC17.93■□□□□ 0.46
CKS2P33552 ST7-201ENST00000265437 2899 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
CKS2P33552 ID4-201ENST00000378700 2344 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CKS2P33552 CAPNS1-215ENST00000628018 1509 ntAPPRIS ALT2 TSL 5 BASIC17.93■□□□□ 0.46
CKS2P33552 CBLN2-209ENST00000585159 2406 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CKS2P33552 SYT7-203ENST00000539008 2061 ntTSL 5 BASIC17.92■□□□□ 0.46
CKS2P33552 ANKRD54-201ENST00000215941 2184 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CKS2P33552 RNF19B-203ENST00000373456 2560 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
CKS2P33552 SCX-201ENST00000567180 999 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CKS2P33552 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CKS2P33552 ERGIC1-202ENST00000393784 2881 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CKS2P33552 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CKS2P33552 FBXL20-203ENST00000577399 1620 ntTSL 5 BASIC17.9■□□□□ 0.46
CKS2P33552 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
CKS2P33552 CDK2AP1-203ENST00000535979 1281 ntTSL 3 BASIC17.9■□□□□ 0.46
CKS2P33552 RAX2-202ENST00000555978 2145 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CKS2P33552 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC17.9■□□□□ 0.46
CKS2P33552 C14orf80-202ENST00000334656 1358 ntAPPRIS ALT2 TSL 2 BASIC17.9■□□□□ 0.46
CKS2P33552 BMP2K-204ENST00000502871 3195 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.46
CKS2P33552 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
CKS2P33552 ZNRF1-201ENST00000320619 2479 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
CKS2P33552 PCBD2-201ENST00000254908 1223 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CKS2P33552 DENR-202ENST00000455982 1052 ntTSL 5 BASIC17.89■□□□□ 0.45
CKS2P33552 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC17.89■□□□□ 0.45
CKS2P33552 AKT1S1-203ENST00000391831 2025 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.45
CKS2P33552 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.45
CKS2P33552 ZDHHC16-206ENST00000370854 1798 ntAPPRIS P4 TSL 1 (best) BASIC17.89■□□□□ 0.45
CKS2P33552 FAM118A-205ENST00000441876 1776 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CKS2P33552 KCNG1-201ENST00000371571 2211 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CKS2P33552 DYRK2-203ENST00000393555 2209 ntAPPRIS ALT1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CKS2P33552 AKT1-203ENST00000407796 2710 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CKS2P33552 TTC3-225ENST00000540756 2025 ntTSL 2 BASIC17.88■□□□□ 0.45
CKS2P33552 CTF1-202ENST00000395019 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CKS2P33552 FUT11-202ENST00000394790 2175 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
CKS2P33552 WIPI2-204ENST00000404704 1663 ntTSL 5 BASIC17.87■□□□□ 0.45
CKS2P33552 AC142381.3-201ENST00000568208 1670 ntBASIC17.87■□□□□ 0.45
CKS2P33552 IGFBP3-201ENST00000275521 2262 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
CKS2P33552 ARRDC2-202ENST00000379656 2528 ntTSL 2 BASIC17.87■□□□□ 0.45
CKS2P33552 PCOLCE2-201ENST00000295992 2021 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CKS2P33552 NR2F6-201ENST00000291442 2404 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CKS2P33552 ATAD3A-203ENST00000378756 2492 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CKS2P33552 YRDC-201ENST00000373044 1826 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CKS2P33552 ITM2C-203ENST00000335005 1889 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
CKS2P33552 PYCR1-202ENST00000337943 1890 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
CKS2P33552 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC17.86■□□□□ 0.45
CKS2P33552 MBD2-202ENST00000398398 1237 ntTSL 2 BASIC17.86■□□□□ 0.45
CKS2P33552 LINC01089-207ENST00000538335 630 ntTSL 3 BASIC17.86■□□□□ 0.45
CKS2P33552 MBD2-205ENST00000583046 1182 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
CKS2P33552 RPIA-201ENST00000283646 1848 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CKS2P33552 SNX21-204ENST00000372542 1824 ntAPPRIS P1 TSL 2 BASIC17.86■□□□□ 0.45
CKS2P33552 RFFL-206ENST00000447669 2030 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
CKS2P33552 AUTS2-202ENST00000403018 957 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
CKS2P33552 MEIOB-203ENST00000412554 1884 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
CKS2P33552 AC135983.2-203ENST00000454486 1613 ntBASIC17.85■□□□□ 0.45
CKS2P33552 FJX1-201ENST00000317811 2450 ntAPPRIS P1 BASIC17.84■□□□□ 0.45
CKS2P33552 AP2M1-202ENST00000382456 2091 ntAPPRIS ALT1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CKS2P33552 PDPK1-204ENST00000441549 1729 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
CKS2P33552 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
CKS2P33552 AL109917.1-201ENST00000412228 906 ntTSL 2 BASIC17.84■□□□□ 0.45
CKS2P33552 BIN1-203ENST00000346226 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
CKS2P33552 BIN1-211ENST00000409400 2143 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
CKS2P33552 C21orf2-202ENST00000339818 2233 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.45
CKS2P33552 TMEM44-202ENST00000347147 2245 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
CKS2P33552 MAPK8IP1P1-201ENST00000574657 1439 ntBASIC17.83■□□□□ 0.45
CKS2P33552 GALNT12-201ENST00000375011 2735 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
CKS2P33552 TMEM150C-201ENST00000449862 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
CKS2P33552 FUS-202ENST00000380244 1818 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
CKS2P33552 TSPAN10-203ENST00000574882 1837 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.44
CKS2P33552 SMOX-202ENST00000305958 2233 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
CKS2P33552 FZD9-201ENST00000344575 2338 ntAPPRIS P1 BASIC17.82■□□□□ 0.44
CKS2P33552 SSBP4-201ENST00000270061 1768 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
CKS2P33552 GTF2E2-201ENST00000355904 1762 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CKS2P33552 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CKS2P33552 AC142472.1-201ENST00000612013 1741 ntBASIC17.82■□□□□ 0.44
CKS2P33552 C8orf58-201ENST00000289989 2016 ntAPPRIS P3 TSL 5 BASIC17.82■□□□□ 0.44
CKS2P33552 SPOCK3-221ENST00000512648 1456 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
CKS2P33552 AZIN2-201ENST00000294517 2182 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CKS2P33552 SNF8-202ENST00000502492 2319 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
CKS2P33552 P4HA3-201ENST00000331597 2274 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CKS2P33552 ADAM22-209ENST00000439864 2576 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
CKS2P33552 AP000547.3-202ENST00000592107 1019 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
CKS2P33552 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC17.81■□□□□ 0.44
CKS2P33552 MED17-227ENST00000640521 2047 ntTSL 5 BASIC17.81■□□□□ 0.44
CKS2P33552 RABGGTA-202ENST00000399409 2265 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CKS2P33552 HAS2-AS1-201ENST00000514180 1656 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
CKS2P33552 AGAP3-201ENST00000335367 2675 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
CKS2P33552 IL13RA1-201ENST00000371642 1096 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
CKS2P33552 R3HCC1-201ENST00000265806 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
CKS2P33552 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC17.8■□□□□ 0.44
CKS2P33552 STOML1-202ENST00000316911 1891 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
CKS2P33552 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CKS2P33552 MNX1-207ENST00000543409 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
CKS2P33552 GIT1-210ENST00000579937 2798 ntTSL 2 BASIC17.79■□□□□ 0.44
CKS2P33552 FRMD8-203ENST00000416776 1818 ntTSL 2 BASIC17.79■□□□□ 0.44
CKS2P33552 BIN1-206ENST00000352848 2209 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
CKS2P33552 R3HDM4-203ENST00000587975 1765 ntTSL 3 BASIC17.79■□□□□ 0.44
CKS2P33552 VSTM2L-202ENST00000373461 1959 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CKS2P33552 SLC35A2-207ENST00000445167 1739 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
CKS2P33552 GRK4-204ENST00000503518 2136 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 92.2 ms