Protein–RNA interactions for Protein: P11836

MS4A1, B-lymphocyte antigen CD20, humanhuman

Predictions only

Length 297 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MS4A1P11836 AC145676.1-201ENST00000514988 2004 ntBASIC31.51■■■□□ 2.63
MS4A1P11836 CEBPB-201ENST00000303004 1956 ntAPPRIS P1 BASIC31.5■■■□□ 2.63
MS4A1P11836 ECHDC3-201ENST00000379215 1649 ntAPPRIS P1 TSL 1 (best) BASIC31.5■■■□□ 2.63
MS4A1P11836 PICALM-224ENST00000630913 2261 ntTSL 5 BASIC31.5■■■□□ 2.63
MS4A1P11836 HLA-V-202ENST00000446817 847 ntBASIC31.5■■■□□ 2.63
MS4A1P11836 GNPTG-204ENST00000527137 386 ntTSL 2 BASIC31.5■■■□□ 2.63
MS4A1P11836 STARD10-220ENST00000545082 1085 ntTSL 3 BASIC31.5■■■□□ 2.63
MS4A1P11836 GDI1-215ENST00000630693 786 ntTSL 4 BASIC31.5■■■□□ 2.63
MS4A1P11836 C12orf75-201ENST00000443585 1366 ntAPPRIS P1 TSL 2 BASIC31.5■■■□□ 2.63
MS4A1P11836 KDM4C-203ENST00000401787 1406 ntTSL 1 (best) BASIC31.49■■■□□ 2.63
MS4A1P11836 SHD-201ENST00000543264 2577 ntAPPRIS P1 TSL 1 (best) BASIC31.49■■■□□ 2.63
MS4A1P11836 RTN2-208ENST00000590526 2357 ntTSL 5 BASIC31.49■■■□□ 2.63
MS4A1P11836 C8orf58-206ENST00000614574 1955 ntAPPRIS ALT2 TSL 5 BASIC31.49■■■□□ 2.63
MS4A1P11836 PLEKHF2-202ENST00000519516 1144 ntAPPRIS P1 TSL 3 BASIC31.49■■■□□ 2.63
MS4A1P11836 CDC16-211ENST00000628084 2058 ntTSL 5 BASIC31.48■■■□□ 2.63
MS4A1P11836 PDCD2-209ENST00000542896 1082 ntTSL 2 BASIC31.48■■■□□ 2.63
MS4A1P11836 PKM-204ENST00000449901 2526 ntTSL 2 BASIC31.47■■■□□ 2.63
MS4A1P11836 AC020928.2-201ENST00000588717 2197 ntBASIC31.47■■■□□ 2.63
MS4A1P11836 CDC34-201ENST00000215574 1471 ntAPPRIS P1 TSL 1 (best) BASIC31.47■■■□□ 2.63
MS4A1P11836 COPZ2-210ENST00000621465 895 ntAPPRIS P1 TSL 1 (best) BASIC31.47■■■□□ 2.63
MS4A1P11836 AQP1-203ENST00000409899 1009 ntTSL 1 (best) BASIC31.46■■■□□ 2.63
MS4A1P11836 MTMR1-214ENST00000542156 1227 ntTSL 1 (best) BASIC31.46■■■□□ 2.63
MS4A1P11836 CLPTM1L-201ENST00000320895 2500 ntAPPRIS P1 TSL 1 (best) BASIC31.46■■■□□ 2.63
MS4A1P11836 PLEKHA8-201ENST00000258679 2293 ntTSL 1 (best) BASIC31.46■■■□□ 2.63
MS4A1P11836 ADAMTSL5-202ENST00000395467 1533 ntTSL 5 BASIC31.45■■■□□ 2.63
MS4A1P11836 MAD2L2-201ENST00000235310 1860 ntAPPRIS P1 TSL 2 BASIC31.45■■■□□ 2.63
MS4A1P11836 C16orf74-204ENST00000602719 1002 ntAPPRIS ALT2 TSL 3 BASIC31.44■■■□□ 2.62
MS4A1P11836 CTF1-202ENST00000395019 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC31.44■■■□□ 2.62
MS4A1P11836 SNX5-201ENST00000377759 2270 ntAPPRIS P1 TSL 1 (best) BASIC31.44■■■□□ 2.62
MS4A1P11836 EPB41L4A-AS2-201ENST00000623705 1396 ntBASIC31.43■■■□□ 2.62
MS4A1P11836 GATA2-AS1-202ENST00000468377 1578 ntTSL 2 BASIC31.43■■■□□ 2.62
MS4A1P11836 CAPN10-208ENST00000404753 2570 ntAPPRIS ALT2 TSL 5 BASIC31.43■■■□□ 2.62
MS4A1P11836 STOML1-202ENST00000316911 1891 ntTSL 1 (best) BASIC31.43■■■□□ 2.62
MS4A1P11836 MAP3K3-210ENST00000584573 2480 ntTSL 1 (best) BASIC31.43■■■□□ 2.62
MS4A1P11836 AMIGO1-201ENST00000369862 2229 ntAPPRIS P1 TSL 5 BASIC31.43■■■□□ 2.62
MS4A1P11836 CMPK2-203ENST00000458098 1224 ntTSL 1 (best) BASIC31.42■■■□□ 2.62
MS4A1P11836 AC187653.1-201ENST00000506382 702 ntAPPRIS P1 TSL 5 BASIC31.42■■■□□ 2.62
MS4A1P11836 KIF13A-207ENST00000502704 1330 ntTSL 1 (best) BASIC31.42■■■□□ 2.62
MS4A1P11836 GAL3ST3-203ENST00000527878 1599 ntAPPRIS P1 TSL 1 (best) BASIC31.42■■■□□ 2.62
MS4A1P11836 SP5-201ENST00000375281 2033 ntAPPRIS P1 TSL 1 (best) BASIC31.41■■■□□ 2.62
MS4A1P11836 CLTA-207ENST00000470744 1102 ntTSL 2 BASIC31.41■■■□□ 2.62
MS4A1P11836 CABP1-202ENST00000316803 1658 ntTSL 1 (best) BASIC31.41■■■□□ 2.62
MS4A1P11836 LINC00588-201ENST00000521663 1875 ntTSL 2 BASIC31.39■■■□□ 2.62
MS4A1P11836 AC016575.1-201ENST00000607026 382 ntBASIC31.38■■■□□ 2.61
MS4A1P11836 KCNG2-201ENST00000316249 1401 ntAPPRIS P1 TSL 1 (best) BASIC31.38■■■□□ 2.61
MS4A1P11836 LDLRAD3-203ENST00000528989 1879 ntTSL 1 (best) BASIC31.38■■■□□ 2.61
MS4A1P11836 NXNL1-201ENST00000301944 946 ntAPPRIS P1 TSL 1 (best) BASIC31.37■■■□□ 2.61
MS4A1P11836 KLC1-203ENST00000347839 2271 ntTSL 5 BASIC31.36■■■□□ 2.61
MS4A1P11836 TSGA13-204ENST00000456951 2046 ntAPPRIS P2 TSL 2 BASIC31.36■■■□□ 2.61
MS4A1P11836 FEZ2-204ENST00000405912 1931 ntTSL 1 (best) BASIC31.36■■■□□ 2.61
MS4A1P11836 UBE2J2-202ENST00000349431 1733 ntAPPRIS P1 TSL 1 (best) BASIC31.36■■■□□ 2.61
MS4A1P11836 DLX2-202ENST00000466293 1852 ntTSL 2 BASIC31.35■■■□□ 2.61
MS4A1P11836 ST7L-206ENST00000369666 1815 ntTSL 1 (best) BASIC31.35■■■□□ 2.61
MS4A1P11836 R3HCC1-201ENST00000265806 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC31.35■■■□□ 2.61
MS4A1P11836 CAMK1D-203ENST00000615792 1725 ntTSL 5 BASIC31.35■■■□□ 2.61
MS4A1P11836 WDR86-204ENST00000477459 1428 ntTSL 2 BASIC31.35■■■□□ 2.61
MS4A1P11836 AC073111.5-206ENST00000642087 859 ntAPPRIS P1 BASIC31.35■■■□□ 2.61
MS4A1P11836 NRG2-203ENST00000340391 1944 ntTSL 5 BASIC31.35■■■□□ 2.61
MS4A1P11836 OTUD5-203ENST00000396743 2682 ntAPPRIS ALT1 TSL 1 (best) BASIC31.34■■■□□ 2.61
MS4A1P11836 MYPOP-201ENST00000322217 1890 ntAPPRIS P1 TSL 1 (best) BASIC31.34■■■□□ 2.61
MS4A1P11836 PDF-201ENST00000288022 1158 ntAPPRIS P1 TSL 1 (best) BASIC31.34■■■□□ 2.61
MS4A1P11836 MIR7108-201ENST00000614319 87 ntBASIC31.34■■■□□ 2.61
MS4A1P11836 BTBD6-204ENST00000463376 2195 ntAPPRIS ALT2 TSL 2 BASIC31.34■■■□□ 2.61
MS4A1P11836 GCLC-209ENST00000514004 2356 ntTSL 1 (best) BASIC31.33■■■□□ 2.61
MS4A1P11836 YBX2-201ENST00000007699 1590 ntAPPRIS P1 TSL 1 (best) BASIC31.33■■■□□ 2.61
MS4A1P11836 RINL-208ENST00000598904 1846 ntAPPRIS P3 TSL 5 BASIC31.33■■■□□ 2.61
MS4A1P11836 AC078883.1-202ENST00000450443 1397 ntTSL 3 BASIC31.32■■■□□ 2.6
MS4A1P11836 AL359258.2-201ENST00000564063 1566 ntBASIC31.32■■■□□ 2.6
MS4A1P11836 BOK-AS1-201ENST00000434306 643 ntTSL 1 (best) BASIC31.32■■■□□ 2.6
MS4A1P11836 TTC3-225ENST00000540756 2025 ntTSL 2 BASIC31.32■■■□□ 2.6
MS4A1P11836 SPOCK3-221ENST00000512648 1456 ntTSL 1 (best) BASIC31.32■■■□□ 2.6
MS4A1P11836 ANKS3-203ENST00000450067 2272 ntTSL 5 BASIC31.32■■■□□ 2.6
MS4A1P11836 U2AF1-204ENST00000459639 1675 ntTSL 1 (best) BASIC31.32■■■□□ 2.6
MS4A1P11836 U2AF1L5-204ENST00000623375 1675 ntTSL 1 (best) BASIC31.32■■■□□ 2.6
MS4A1P11836 BAMBI-201ENST00000375533 1877 ntAPPRIS P1 TSL 1 (best) BASIC31.31■■■□□ 2.6
MS4A1P11836 PPP1R3F-205ENST00000495799 1537 ntTSL 1 (best) BASIC31.31■■■□□ 2.6
MS4A1P11836 VSTM2L-202ENST00000373461 1959 ntAPPRIS P1 TSL 1 (best) BASIC31.31■■■□□ 2.6
MS4A1P11836 METRNL-202ENST00000570778 967 ntTSL 5 BASIC31.31■■■□□ 2.6
MS4A1P11836 PCYT2-202ENST00000538721 1765 ntAPPRIS P1 TSL 1 (best) BASIC31.3■■■□□ 2.6
MS4A1P11836 PARD6A-201ENST00000219255 1248 ntAPPRIS P3 TSL 1 (best) BASIC31.3■■■□□ 2.6
MS4A1P11836 C16orf95-205ENST00000567970 1031 ntAPPRIS ALT2 TSL 5 BASIC31.3■■■□□ 2.6
MS4A1P11836 KCTD15-206ENST00000588881 1211 ntAPPRIS P1 TSL 2 BASIC31.3■■■□□ 2.6
MS4A1P11836 TP53I3-201ENST00000238721 1998 ntAPPRIS P1 TSL 1 (best) BASIC31.3■■■□□ 2.6
MS4A1P11836 NRM-201ENST00000259953 1755 ntAPPRIS P2 TSL 2 BASIC31.3■■■□□ 2.6
MS4A1P11836 TSKU-201ENST00000333090 2712 ntAPPRIS P1 TSL 1 (best) BASIC31.29■■■□□ 2.6
MS4A1P11836 ST6GALNAC2-201ENST00000225276 2170 ntAPPRIS P1 TSL 1 (best) BASIC31.29■■■□□ 2.6
MS4A1P11836 CASP9-202ENST00000348549 1621 ntTSL 1 (best) BASIC31.29■■■□□ 2.6
MS4A1P11836 AC126177.7-201ENST00000547904 679 ntBASIC31.29■■■□□ 2.6
MS4A1P11836 TBC1D10A-201ENST00000215790 2077 ntAPPRIS P3 TSL 1 (best) BASIC31.28■■■□□ 2.6
MS4A1P11836 DACT1-206ENST00000556859 2239 ntAPPRIS ALT2 TSL 2 BASIC31.28■■■□□ 2.6
MS4A1P11836 LSM7-201ENST00000252622 529 ntAPPRIS P1 TSL 1 (best) BASIC31.28■■■□□ 2.6
MS4A1P11836 FAAP20-202ENST00000378546 729 ntAPPRIS P1 TSL 1 (best) BASIC31.28■■■□□ 2.6
MS4A1P11836 HABP4-202ENST00000375251 2304 ntTSL 1 (best) BASIC31.27■■■□□ 2.6
MS4A1P11836 ARL6IP4-211ENST00000454885 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC31.27■■■□□ 2.6
MS4A1P11836 PMS1-205ENST00000409985 1882 ntTSL 2 BASIC31.27■■■□□ 2.6
MS4A1P11836 KRT18-201ENST00000388835 1562 ntAPPRIS P1 TSL 1 (best) BASIC31.27■■■□□ 2.6
MS4A1P11836 CDC16-204ENST00000360383 2211 ntAPPRIS P3 TSL 5 BASIC31.26■■■□□ 2.6
MS4A1P11836 PQLC3-201ENST00000295083 1830 ntAPPRIS P1 TSL 1 (best) BASIC31.26■■■□□ 2.6
MS4A1P11836 NAGS-201ENST00000293404 2182 ntAPPRIS P1 TSL 1 (best) BASIC31.26■■■□□ 2.6
MS4A1P11836 FGF20-201ENST00000180166 1688 ntAPPRIS P1 TSL 1 (best) BASIC31.26■■■□□ 2.6
Retrieved 100 of 98,524 protein–RNA pairs in 13.9 ms