Protein–RNA interactions for Protein: P0DMP2

SRGAP2B, SLIT-ROBO Rho GTPase-activating protein 2B, humanhuman

Predictions only

Length 458 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP2BP0DMP2 GNAS-210ENST00000371085 1972 ntTSL 1 (best) BASIC26.4■■□□□ 1.82
SRGAP2BP0DMP2 TNFRSF25-205ENST00000377782 1632 ntAPPRIS P4 TSL 1 (best) BASIC26.4■■□□□ 1.82
SRGAP2BP0DMP2 TSPY4-202ENST00000426950 1179 ntAPPRIS P5 TSL 5 BASIC26.4■■□□□ 1.82
SRGAP2BP0DMP2 MDFIC-206ENST00000448022 484 ntTSL 2 BASIC26.4■■□□□ 1.82
SRGAP2BP0DMP2 AC010980.1-201ENST00000587192 1142 ntBASIC26.4■■□□□ 1.82
SRGAP2BP0DMP2 GATA2-AS1-202ENST00000468377 1578 ntTSL 2 BASIC26.4■■□□□ 1.82
SRGAP2BP0DMP2 MYCL-202ENST00000372816 1688 ntAPPRIS P3 TSL 2 BASIC26.4■■□□□ 1.82
SRGAP2BP0DMP2 SSBP4-201ENST00000270061 1768 ntAPPRIS P3 TSL 1 (best) BASIC26.39■■□□□ 1.82
SRGAP2BP0DMP2 AC138647.1-201ENST00000427937 648 ntAPPRIS P1 TSL 5 BASIC26.39■■□□□ 1.82
SRGAP2BP0DMP2 PKNOX2-AS1-201ENST00000532316 586 ntTSL 3 BASIC26.39■■□□□ 1.82
SRGAP2BP0DMP2 MIR3960-201ENST00000583311 91 ntBASIC26.39■■□□□ 1.82
SRGAP2BP0DMP2 TESK1-201ENST00000336395 2421 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.81
SRGAP2BP0DMP2 RHOBTB3-206ENST00000506817 1432 ntTSL 2 BASIC26.39■■□□□ 1.81
SRGAP2BP0DMP2 KRT8P33-201ENST00000508125 1423 ntBASIC26.39■■□□□ 1.81
SRGAP2BP0DMP2 SLC35A1-203ENST00000369557 1653 ntTSL 2 BASIC26.38■■□□□ 1.81
SRGAP2BP0DMP2 AC139795.1-203ENST00000515045 853 ntTSL 2 BASIC26.38■■□□□ 1.81
SRGAP2BP0DMP2 GNPTG-204ENST00000527137 386 ntTSL 2 BASIC26.38■■□□□ 1.81
SRGAP2BP0DMP2 MIR6765-201ENST00000614092 87 ntBASIC26.38■■□□□ 1.81
SRGAP2BP0DMP2 AC093390.2-201ENST00000638628 1007 ntTSL 5 BASIC26.38■■□□□ 1.81
SRGAP2BP0DMP2 FGF20-201ENST00000180166 1688 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
SRGAP2BP0DMP2 CCNYL1-203ENST00000392209 1952 ntTSL 2 BASIC26.37■■□□□ 1.81
SRGAP2BP0DMP2 MIF-201ENST00000215754 939 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
SRGAP2BP0DMP2 C17orf49-201ENST00000439424 850 ntAPPRIS P3 TSL 1 (best) BASIC26.37■■□□□ 1.81
SRGAP2BP0DMP2 RALY-201ENST00000246194 1789 ntAPPRIS P4 TSL 1 (best) BASIC26.37■■□□□ 1.81
SRGAP2BP0DMP2 RAP2CP1-202ENST00000605179 643 ntBASIC26.36■■□□□ 1.81
SRGAP2BP0DMP2 PROCA1-201ENST00000301039 1566 ntTSL 1 (best) BASIC26.36■■□□□ 1.81
SRGAP2BP0DMP2 HMCES-202ENST00000389735 1763 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
SRGAP2BP0DMP2 GNAS-211ENST00000371095 1931 ntAPPRIS ALT1 TSL 1 (best) BASIC26.35■■□□□ 1.81
SRGAP2BP0DMP2 NRBF2-202ENST00000435510 1816 ntTSL 2 BASIC26.35■■□□□ 1.81
SRGAP2BP0DMP2 MSRB1-206ENST00000622125 1363 ntAPPRIS ALT1 TSL 5 BASIC26.34■■□□□ 1.81
SRGAP2BP0DMP2 ACTR3B-201ENST00000256001 2216 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
SRGAP2BP0DMP2 COL13A1-213ENST00000520267 2276 ntAPPRIS ALT2 TSL 5 BASIC26.34■■□□□ 1.81
SRGAP2BP0DMP2 PFN2-211ENST00000489155 636 ntTSL 4 BASIC26.34■■□□□ 1.81
SRGAP2BP0DMP2 AC009299.2-201ENST00000482477 511 ntBASIC26.33■■□□□ 1.81
SRGAP2BP0DMP2 SOCS2-202ENST00000536696 1065 ntAPPRIS P1 TSL 2 BASIC26.33■■□□□ 1.81
SRGAP2BP0DMP2 AC018755.3-202ENST00000596210 929 ntBASIC26.33■■□□□ 1.81
SRGAP2BP0DMP2 TNFSF12-201ENST00000293825 1553 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.8
SRGAP2BP0DMP2 POTEF-201ENST00000361163 1586 ntTSL 5 BASIC26.33■■□□□ 1.8
SRGAP2BP0DMP2 COMMD7-201ENST00000278980 1900 ntAPPRIS P3 TSL 1 (best) BASIC26.32■■□□□ 1.8
SRGAP2BP0DMP2 PNMT-201ENST00000269582 1253 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
SRGAP2BP0DMP2 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC26.32■■□□□ 1.8
SRGAP2BP0DMP2 CIB2-202ENST00000539011 1511 ntTSL 1 (best) BASIC26.32■■□□□ 1.8
SRGAP2BP0DMP2 PPP4C-201ENST00000279387 1407 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
SRGAP2BP0DMP2 AL354928.1-201ENST00000438380 617 ntTSL 2 BASIC26.31■■□□□ 1.8
SRGAP2BP0DMP2 SMKR1-201ENST00000462322 1035 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
SRGAP2BP0DMP2 AC008105.2-203ENST00000591361 550 ntTSL 4 BASIC26.31■■□□□ 1.8
SRGAP2BP0DMP2 LINC01233-202ENST00000598832 568 ntTSL 2 BASIC26.31■■□□□ 1.8
SRGAP2BP0DMP2 DRD5P2-201ENST00000421395 2012 ntBASIC26.31■■□□□ 1.8
SRGAP2BP0DMP2 DERA-201ENST00000428559 1705 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
SRGAP2BP0DMP2 AL592295.1-201ENST00000400984 884 ntBASIC26.3■■□□□ 1.8
SRGAP2BP0DMP2 H2AFY-204ENST00000423969 924 ntTSL 2 BASIC26.3■■□□□ 1.8
SRGAP2BP0DMP2 FAM159A-204ENST00000517870 748 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
SRGAP2BP0DMP2 TPI1-210ENST00000613953 1460 ntTSL 1 (best) BASIC26.3■■□□□ 1.8
SRGAP2BP0DMP2 SNX15-202ENST00000377244 1939 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
SRGAP2BP0DMP2 IGFBP3-202ENST00000381083 1050 ntAPPRIS ALT1 TSL 5 BASIC26.29■■□□□ 1.8
SRGAP2BP0DMP2 GSR-206ENST00000546342 1482 ntAPPRIS ALT2 TSL 1 (best) BASIC26.29■■□□□ 1.8
SRGAP2BP0DMP2 ZDHHC23-206ENST00000498275 2055 ntAPPRIS ALT2 TSL 2 BASIC26.28■■□□□ 1.8
SRGAP2BP0DMP2 HES6-204ENST00000409182 863 ntTSL 2 BASIC26.28■■□□□ 1.8
SRGAP2BP0DMP2 PLA2G10-201ENST00000438167 1000 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
SRGAP2BP0DMP2 AC053527.1-201ENST00000502790 685 ntTSL 3 BASIC26.28■■□□□ 1.8
SRGAP2BP0DMP2 IGFBP7-201ENST00000295666 1427 ntAPPRIS P3 TSL 1 (best) BASIC26.28■■□□□ 1.8
SRGAP2BP0DMP2 NTHL1-201ENST00000219066 1067 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
SRGAP2BP0DMP2 BEX3-202ENST00000372634 753 ntTSL 2 BASIC26.27■■□□□ 1.8
SRGAP2BP0DMP2 SPCS2P3-201ENST00000500401 656 ntBASIC26.27■■□□□ 1.8
SRGAP2BP0DMP2 TIE1-210ENST00000538015 1140 ntTSL 1 (best) BASIC26.27■■□□□ 1.8
SRGAP2BP0DMP2 AC131212.1-201ENST00000613771 668 ntBASIC26.27■■□□□ 1.8
SRGAP2BP0DMP2 FZD2-201ENST00000315323 2112 ntAPPRIS P1 BASIC26.27■■□□□ 1.8
SRGAP2BP0DMP2 ITGA9-203ENST00000422441 2282 ntTSL 1 (best) BASIC26.27■■□□□ 1.8
SRGAP2BP0DMP2 RBM42-205ENST00000589871 1487 ntTSL 5 BASIC26.26■■□□□ 1.79
SRGAP2BP0DMP2 AC019069.1-201ENST00000610008 1333 ntBASIC26.26■■□□□ 1.79
SRGAP2BP0DMP2 CTAG1B-201ENST00000328435 748 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
SRGAP2BP0DMP2 CTAG1A-202ENST00000599837 748 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
SRGAP2BP0DMP2 TCEA1-213ENST00000640041 1171 ntTSL 5 BASIC26.26■■□□□ 1.79
SRGAP2BP0DMP2 COQ2-201ENST00000311461 1464 ntAPPRIS ALT2 TSL 5 BASIC26.25■■□□□ 1.79
SRGAP2BP0DMP2 SOHLH1-202ENST00000425225 1411 ntAPPRIS ALT2 TSL 5 BASIC26.25■■□□□ 1.79
SRGAP2BP0DMP2 LMTK3-202ENST00000600059 5113 ntAPPRIS ALT2 TSL 2 BASIC26.25■■□□□ 1.79
SRGAP2BP0DMP2 AC145124.1-201ENST00000528514 1361 ntTSL 2 BASIC26.25■■□□□ 1.79
SRGAP2BP0DMP2 C9orf47-202ENST00000375850 859 ntAPPRIS ALT2 TSL 3 BASIC26.25■■□□□ 1.79
SRGAP2BP0DMP2 AL355490.1-201ENST00000445808 805 ntTSL 3 BASIC26.25■■□□□ 1.79
SRGAP2BP0DMP2 FTCD-201ENST00000291670 1905 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
SRGAP2BP0DMP2 PFDN2-201ENST00000368010 677 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
SRGAP2BP0DMP2 MXRA7-203ENST00000449428 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC26.23■■□□□ 1.79
SRGAP2BP0DMP2 TIMM29-201ENST00000270502 1425 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
SRGAP2BP0DMP2 SHISA8-202ENST00000621082 1405 ntAPPRIS P2 TSL 5 BASIC26.23■■□□□ 1.79
SRGAP2BP0DMP2 ZFAND2B-201ENST00000289528 1314 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
SRGAP2BP0DMP2 RAET1E-AS1-203ENST00000606915 1210 ntTSL 1 (best) BASIC26.23■■□□□ 1.79
SRGAP2BP0DMP2 SMARCD3-203ENST00000392811 2018 ntTSL 1 (best) BASIC26.22■■□□□ 1.79
SRGAP2BP0DMP2 TBCC-201ENST00000372876 1616 ntAPPRIS P1 BASIC26.22■■□□□ 1.79
SRGAP2BP0DMP2 HSPE1-201ENST00000233893 950 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
SRGAP2BP0DMP2 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC26.22■■□□□ 1.79
SRGAP2BP0DMP2 PCK2-202ENST00000396973 1830 ntTSL 1 (best) BASIC26.21■■□□□ 1.79
SRGAP2BP0DMP2 BARX1-202ENST00000401724 1323 ntTSL 1 (best) BASIC26.21■■□□□ 1.79
SRGAP2BP0DMP2 CDH23-208ENST00000461841 2000 ntTSL 5 BASIC26.21■■□□□ 1.79
SRGAP2BP0DMP2 NAXE-203ENST00000368235 1125 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
SRGAP2BP0DMP2 RASGEF1B-211ENST00000514050 537 ntTSL 2 BASIC26.21■■□□□ 1.79
SRGAP2BP0DMP2 FAM117A-201ENST00000240364 2365 ntAPPRIS P2 TSL 1 (best) BASIC26.2■■□□□ 1.79
SRGAP2BP0DMP2 GSX1-201ENST00000302945 1663 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.78
SRGAP2BP0DMP2 FAM120C-203ENST00000477084 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC26.2■■□□□ 1.78
SRGAP2BP0DMP2 AC103834.1-201ENST00000520383 144 ntBASIC26.2■■□□□ 1.78
SRGAP2BP0DMP2 MIR4508-201ENST00000584178 70 ntBASIC26.2■■□□□ 1.78
Retrieved 100 of 98,524 protein–RNA pairs in 15.9 ms