Protein–RNA interactions for Protein: P0DKX0

ZNF728, Zinc finger protein 728, humanhuman

Predictions only

Length 622 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF728P0DKX0 SURF1-205ENST00000615505 991 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
ZNF728P0DKX0 AC092902.2-221ENST00000628476 965 ntTSL 5 BASIC20.75■□□□□ 0.91
ZNF728P0DKX0 C8orf58-206ENST00000614574 1955 ntAPPRIS ALT2 TSL 5 BASIC20.75■□□□□ 0.91
ZNF728P0DKX0 RHBDD2-202ENST00000318622 1878 ntTSL 2 BASIC20.75■□□□□ 0.91
ZNF728P0DKX0 BAMBI-201ENST00000375533 1877 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
ZNF728P0DKX0 RP9-201ENST00000297157 1121 ntAPPRIS P2 TSL 1 (best) BASIC20.74■□□□□ 0.91
ZNF728P0DKX0 GPR25-201ENST00000304244 1224 ntAPPRIS P1 BASIC20.74■□□□□ 0.91
ZNF728P0DKX0 NSMCE4A-201ENST00000369017 1224 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
ZNF728P0DKX0 SP5-201ENST00000375281 2033 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
ZNF728P0DKX0 SHD-201ENST00000543264 2577 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
ZNF728P0DKX0 VSIG8-201ENST00000368100 1818 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
ZNF728P0DKX0 NPAS3-203ENST00000357798 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
ZNF728P0DKX0 SETBP1-202ENST00000426838 1785 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
ZNF728P0DKX0 PCYT2-202ENST00000538721 1765 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
ZNF728P0DKX0 C19orf47-202ENST00000392035 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
ZNF728P0DKX0 TOP2B-204ENST00000435706 5389 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
ZNF728P0DKX0 FANCE-201ENST00000229769 2554 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
ZNF728P0DKX0 KLC1-203ENST00000347839 2271 ntTSL 5 BASIC20.73■□□□□ 0.91
ZNF728P0DKX0 ANKS3-203ENST00000450067 2272 ntTSL 5 BASIC20.73■□□□□ 0.91
ZNF728P0DKX0 KRT18-201ENST00000388835 1562 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
ZNF728P0DKX0 DVL3-201ENST00000313143 5254 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
ZNF728P0DKX0 ANO1-202ENST00000355303 4790 ntAPPRIS P2 TSL 1 (best) BASIC20.72■□□□□ 0.91
ZNF728P0DKX0 LAGE3-201ENST00000357360 949 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
ZNF728P0DKX0 WNT5A-AS1-201ENST00000469484 500 ntTSL 3 BASIC20.72■□□□□ 0.91
ZNF728P0DKX0 PICALM-224ENST00000630913 2261 ntTSL 5 BASIC20.72■□□□□ 0.91
ZNF728P0DKX0 POLR3H-201ENST00000337566 1330 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
ZNF728P0DKX0 SNX5-201ENST00000377759 2270 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
ZNF728P0DKX0 FAAP20-202ENST00000378546 729 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
ZNF728P0DKX0 PLEKHA8-201ENST00000258679 2293 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
ZNF728P0DKX0 CEBPB-201ENST00000303004 1956 ntAPPRIS P1 BASIC20.7■□□□□ 0.9
ZNF728P0DKX0 MEN1-204ENST00000377313 1871 ntAPPRIS P3 TSL 2 BASIC20.69■□□□□ 0.9
ZNF728P0DKX0 NELFB-202ENST00000634710 1887 ntAPPRIS P2 TSL 1 (best) BASIC20.69■□□□□ 0.9
ZNF728P0DKX0 PPP2R2D-201ENST00000455566 5738 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
ZNF728P0DKX0 PARD6A-201ENST00000219255 1248 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
ZNF728P0DKX0 LINC01896-206ENST00000575722 1256 ntTSL 2 BASIC20.69■□□□□ 0.9
ZNF728P0DKX0 AC092803.2-201ENST00000564287 1899 ntBASIC20.69■□□□□ 0.9
ZNF728P0DKX0 AL118558.1-203ENST00000553701 447 ntTSL 3 BASIC20.68■□□□□ 0.9
ZNF728P0DKX0 KAT8-206ENST00000543774 1846 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
ZNF728P0DKX0 MAD2L2-201ENST00000235310 1860 ntAPPRIS P1 TSL 2 BASIC20.68■□□□□ 0.9
ZNF728P0DKX0 GDF1-201ENST00000247005 2517 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
ZNF728P0DKX0 CERS1-204ENST00000623882 2517 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
ZNF728P0DKX0 CTBP2-211ENST00000494626 2014 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
ZNF728P0DKX0 BIN1-210ENST00000393041 2272 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
ZNF728P0DKX0 DUSP8P4-201ENST00000399538 1761 ntBASIC20.67■□□□□ 0.9
ZNF728P0DKX0 NTN3-201ENST00000293973 1986 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
ZNF728P0DKX0 GTPBP3-202ENST00000358792 1951 ntAPPRIS P4 TSL 2 BASIC20.67■□□□□ 0.9
ZNF728P0DKX0 C16orf95-205ENST00000567970 1031 ntAPPRIS ALT2 TSL 5 BASIC20.67■□□□□ 0.9
ZNF728P0DKX0 METRNL-202ENST00000570778 967 ntTSL 5 BASIC20.67■□□□□ 0.9
ZNF728P0DKX0 AMIGO1-201ENST00000369862 2229 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
ZNF728P0DKX0 GSR-205ENST00000541648 1410 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
ZNF728P0DKX0 HNRNPL-201ENST00000221419 2471 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
ZNF728P0DKX0 S1PR4-201ENST00000246115 1565 ntAPPRIS P1 BASIC20.67■□□□□ 0.9
ZNF728P0DKX0 LYPLA1-215ENST00000618914 2482 ntTSL 5 BASIC20.66■□□□□ 0.9
ZNF728P0DKX0 MIR639-201ENST00000384974 98 ntBASIC20.66■□□□□ 0.9
ZNF728P0DKX0 ACOT12-204ENST00000513751 612 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
ZNF728P0DKX0 AL121987.2-201ENST00000418602 1578 ntTSL 2 BASIC20.66■□□□□ 0.9
ZNF728P0DKX0 KHSRP-201ENST00000398148 2993 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
ZNF728P0DKX0 GCLC-209ENST00000514004 2356 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
ZNF728P0DKX0 HAS1-205ENST00000601714 2086 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
ZNF728P0DKX0 EMID1-202ENST00000404755 2049 ntTSL 5 BASIC20.65■□□□□ 0.9
ZNF728P0DKX0 C9orf50-201ENST00000372478 1620 ntAPPRIS P2 TSL 2 BASIC20.65■□□□□ 0.9
ZNF728P0DKX0 G6PC3-201ENST00000269097 1533 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
ZNF728P0DKX0 LACTBL1-202ENST00000618559 1500 ntAPPRIS ALT2 TSL 5 BASIC20.65■□□□□ 0.9
ZNF728P0DKX0 HLA-V-202ENST00000446817 847 ntBASIC20.65■□□□□ 0.9
ZNF728P0DKX0 AC148477.6-201ENST00000623746 465 ntBASIC20.65■□□□□ 0.9
ZNF728P0DKX0 ETS1-201ENST00000319397 2231 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
ZNF728P0DKX0 MAGI2-208ENST00000522391 4878 ntAPPRIS ALT2 TSL 5 BASIC20.65■□□□□ 0.9
ZNF728P0DKX0 PRR5-202ENST00000336985 1878 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
ZNF728P0DKX0 AP004609.3-201ENST00000610705 1884 ntBASIC20.64■□□□□ 0.9
ZNF728P0DKX0 CAPNS1-215ENST00000628018 1509 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.9
ZNF728P0DKX0 CLTA-207ENST00000470744 1102 ntTSL 2 BASIC20.64■□□□□ 0.89
ZNF728P0DKX0 RABL6-202ENST00000357466 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
ZNF728P0DKX0 PKM-204ENST00000449901 2526 ntTSL 2 BASIC20.64■□□□□ 0.89
ZNF728P0DKX0 MAP3K3-210ENST00000584573 2480 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
ZNF728P0DKX0 SPATA33-209ENST00000579310 1490 ntAPPRIS ALT2 TSL 2 BASIC20.63■□□□□ 0.89
ZNF728P0DKX0 CHST11-203ENST00000547956 936 ntTSL 2 BASIC20.63■□□□□ 0.89
ZNF728P0DKX0 FBXL8-201ENST00000258200 1658 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
ZNF728P0DKX0 TRIM54-201ENST00000296098 2027 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
ZNF728P0DKX0 TSKU-201ENST00000333090 2712 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
ZNF728P0DKX0 DACT1-206ENST00000556859 2239 ntAPPRIS ALT2 TSL 2 BASIC20.62■□□□□ 0.89
ZNF728P0DKX0 ST6GALNAC2-201ENST00000225276 2170 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
ZNF728P0DKX0 DTNBP1-212ENST00000622898 1305 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
ZNF728P0DKX0 RPS2-202ENST00000526522 924 ntTSL 2 BASIC20.62■□□□□ 0.89
ZNF728P0DKX0 COPZ2-210ENST00000621465 895 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
ZNF728P0DKX0 BICDL2-203ENST00000572449 1984 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
ZNF728P0DKX0 HABP4-202ENST00000375251 2304 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
ZNF728P0DKX0 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC20.62■□□□□ 0.89
ZNF728P0DKX0 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
ZNF728P0DKX0 PIM3-201ENST00000360612 2369 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
ZNF728P0DKX0 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC20.61■□□□□ 0.89
ZNF728P0DKX0 RNF175-201ENST00000347063 1604 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
ZNF728P0DKX0 ARL6IP4-211ENST00000454885 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
ZNF728P0DKX0 STARD10-220ENST00000545082 1085 ntTSL 3 BASIC20.61■□□□□ 0.89
ZNF728P0DKX0 CAPNS1-211ENST00000590874 926 ntTSL 5 BASIC20.61■□□□□ 0.89
ZNF728P0DKX0 AC073111.5-206ENST00000642087 859 ntAPPRIS P1 BASIC20.61■□□□□ 0.89
ZNF728P0DKX0 MIR219A2-201ENST00000608502 1504 ntBASIC20.61■□□□□ 0.89
ZNF728P0DKX0 TBC1D10A-201ENST00000215790 2077 ntAPPRIS P3 TSL 1 (best) BASIC20.61■□□□□ 0.89
ZNF728P0DKX0 TP53I3-201ENST00000238721 1998 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
ZNF728P0DKX0 PRR5-ARHGAP8-202ENST00000361473 2013 ntTSL 5 BASIC20.6■□□□□ 0.89
ZNF728P0DKX0 FAM193A-211ENST00000637812 4885 ntAPPRIS ALT2 TSL 5 BASIC20.6■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 45.1 ms