Protein–RNA interactions for Protein: P08123

COL1A2, Collagen alpha-2(I) chain, humanhuman

Predictions only

Length 1,366 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A2P08123 ARHGEF7-AS2-201ENST00000425094 1239 ntTSL 1 (best) BASIC27.3■■□□□ 1.96
COL1A2P08123 AC148477.1-201ENST00000537720 476 ntTSL 3 BASIC27.3■■□□□ 1.96
COL1A2P08123 PRRX2-201ENST00000372469 1311 ntAPPRIS P1 TSL 1 (best) BASIC27.29■■□□□ 1.96
COL1A2P08123 TSPY4-202ENST00000426950 1179 ntAPPRIS P5 TSL 5 BASIC27.29■■□□□ 1.96
COL1A2P08123 C17orf97-201ENST00000360127 1839 ntAPPRIS P2 TSL 1 (best) BASIC27.29■■□□□ 1.96
COL1A2P08123 TMEM120A-214ENST00000493111 1456 ntAPPRIS P1 TSL 1 (best) BASIC27.28■■□□□ 1.96
COL1A2P08123 MAPK13-201ENST00000211287 2052 ntAPPRIS P1 TSL 1 (best) BASIC27.28■■□□□ 1.96
COL1A2P08123 DUX4L9-201ENST00000449051 1259 ntBASIC27.28■■□□□ 1.96
COL1A2P08123 SOCS2-202ENST00000536696 1065 ntAPPRIS P1 TSL 2 BASIC27.27■■□□□ 1.96
COL1A2P08123 SSTR5-201ENST00000293897 1362 ntAPPRIS P1 BASIC27.27■■□□□ 1.96
COL1A2P08123 AC138647.1-201ENST00000427937 648 ntAPPRIS P1 TSL 5 BASIC27.26■■□□□ 1.95
COL1A2P08123 SP8-202ENST00000418710 1618 ntAPPRIS ALT2 TSL 1 (best) BASIC27.26■■□□□ 1.95
COL1A2P08123 RFFL-206ENST00000447669 2030 ntAPPRIS P1 TSL 5 BASIC27.26■■□□□ 1.95
COL1A2P08123 LY6H-201ENST00000342752 951 ntAPPRIS ALT2 TSL 1 (best) BASIC27.25■■□□□ 1.95
COL1A2P08123 ALKAL1-201ENST00000358543 1217 ntAPPRIS P2 TSL 1 (best) BASIC27.25■■□□□ 1.95
COL1A2P08123 LY6H-202ENST00000414417 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC27.25■■□□□ 1.95
COL1A2P08123 LY6H-203ENST00000430474 925 ntAPPRIS P3 TSL 3 BASIC27.25■■□□□ 1.95
COL1A2P08123 MEN1-204ENST00000377313 1871 ntAPPRIS P3 TSL 2 BASIC27.25■■□□□ 1.95
COL1A2P08123 VEGFC-202ENST00000618562 2064 ntAPPRIS P1 TSL 1 (best) BASIC27.25■■□□□ 1.95
COL1A2P08123 TMEM268-201ENST00000288502 2314 ntAPPRIS P3 TSL 1 (best) BASIC27.25■■□□□ 1.95
COL1A2P08123 CAMK1D-203ENST00000615792 1725 ntTSL 5 BASIC27.24■■□□□ 1.95
COL1A2P08123 SPCS2P3-201ENST00000500401 656 ntBASIC27.24■■□□□ 1.95
COL1A2P08123 DUX4L18-201ENST00000553347 1267 ntBASIC27.24■■□□□ 1.95
COL1A2P08123 CRTAP-202ENST00000449224 1811 ntAPPRIS ALT2 TSL 2 BASIC27.24■■□□□ 1.95
COL1A2P08123 PPP4C-201ENST00000279387 1407 ntAPPRIS P1 TSL 1 (best) BASIC27.24■■□□□ 1.95
COL1A2P08123 AL449106.1-201ENST00000608517 1980 ntBASIC27.24■■□□□ 1.95
COL1A2P08123 ZSCAN18-202ENST00000421612 1488 ntTSL 4 BASIC27.24■■□□□ 1.95
COL1A2P08123 FAM117A-201ENST00000240364 2365 ntAPPRIS P2 TSL 1 (best) BASIC27.23■■□□□ 1.95
COL1A2P08123 NTHL1-201ENST00000219066 1067 ntAPPRIS P1 TSL 1 (best) BASIC27.23■■□□□ 1.95
COL1A2P08123 PYY2-202ENST00000441253 1076 ntTSL 1 (best) BASIC27.23■■□□□ 1.95
COL1A2P08123 AC009690.3-201ENST00000569547 1902 ntAPPRIS P1 TSL 2 BASIC27.23■■□□□ 1.95
COL1A2P08123 TM6SF1-204ENST00000379390 1638 ntTSL 1 (best) BASIC27.23■■□□□ 1.95
COL1A2P08123 ERFE-207ENST00000546354 1065 ntAPPRIS P2 TSL 1 (best) BASIC27.22■■□□□ 1.95
COL1A2P08123 ATXN3-252ENST00000620536 1044 ntTSL 5 BASIC27.22■■□□□ 1.95
COL1A2P08123 ATXN3-253ENST00000621269 936 ntTSL 5 BASIC27.22■■□□□ 1.95
COL1A2P08123 ABHD17B-202ENST00000377041 1312 ntAPPRIS P4 TSL 1 (best) BASIC27.22■■□□□ 1.95
COL1A2P08123 EPHB2-207ENST00000544305 1709 ntTSL 1 (best) BASIC27.22■■□□□ 1.95
COL1A2P08123 ACTR3B-201ENST00000256001 2216 ntAPPRIS P1 TSL 1 (best) BASIC27.21■■□□□ 1.95
COL1A2P08123 TESK1-206ENST00000620767 2438 ntAPPRIS P1 TSL 5 BASIC27.21■■□□□ 1.95
COL1A2P08123 C14orf80-205ENST00000392523 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC27.21■■□□□ 1.95
COL1A2P08123 REXO4-201ENST00000371935 1899 ntTSL 3 BASIC27.21■■□□□ 1.95
COL1A2P08123 ILDR2-208ENST00000529387 1238 ntTSL 5 BASIC27.21■■□□□ 1.95
COL1A2P08123 EVC-203ENST00000509451 1960 ntTSL 1 (best) BASIC27.2■■□□□ 1.95
COL1A2P08123 HSPB6-202ENST00000587965 711 ntTSL 2 BASIC27.2■■□□□ 1.94
COL1A2P08123 BBC3-204ENST00000449228 1827 ntTSL 1 (best) BASIC27.2■■□□□ 1.94
COL1A2P08123 BX255925.1-201ENST00000566954 1854 ntBASIC27.2■■□□□ 1.94
COL1A2P08123 C8orf58-202ENST00000409586 2021 ntAPPRIS ALT2 TSL 2 BASIC27.2■■□□□ 1.94
COL1A2P08123 WSB2-201ENST00000315436 2646 ntAPPRIS P1 TSL 1 (best) BASIC27.19■■□□□ 1.94
COL1A2P08123 RUNX1-205ENST00000399240 1590 ntTSL 3 BASIC27.19■■□□□ 1.94
COL1A2P08123 TMEM150A-201ENST00000306353 1484 ntTSL 1 (best) BASIC27.19■■□□□ 1.94
COL1A2P08123 IGFBP7-201ENST00000295666 1427 ntAPPRIS P3 TSL 1 (best) BASIC27.19■■□□□ 1.94
COL1A2P08123 RIPPLY2-202ENST00000369689 664 ntAPPRIS P2 TSL 1 (best) BASIC27.19■■□□□ 1.94
COL1A2P08123 C17orf49-201ENST00000439424 850 ntAPPRIS P3 TSL 1 (best) BASIC27.19■■□□□ 1.94
COL1A2P08123 SEC11C-204ENST00000587834 1202 ntAPPRIS P1 TSL 1 (best) BASIC27.19■■□□□ 1.94
COL1A2P08123 PXDC1-202ENST00000380283 2190 ntAPPRIS P1 TSL 1 (best) BASIC27.18■■□□□ 1.94
COL1A2P08123 SHOX2-201ENST00000389589 2072 ntAPPRIS P3 TSL 1 (best) BASIC27.18■■□□□ 1.94
COL1A2P08123 ZNF639-209ENST00000496856 2033 ntAPPRIS P1 TSL 1 (best) BASIC27.18■■□□□ 1.94
COL1A2P08123 RASGEF1B-211ENST00000514050 537 ntTSL 2 BASIC27.18■■□□□ 1.94
COL1A2P08123 AC104002.3-202ENST00000557170 1100 ntTSL 3 BASIC27.18■■□□□ 1.94
COL1A2P08123 TBX2-AS1-203ENST00000590421 861 ntTSL 2 BASIC27.18■■□□□ 1.94
COL1A2P08123 MIR6765-201ENST00000614092 87 ntBASIC27.18■■□□□ 1.94
COL1A2P08123 AC064853.2-201ENST00000641246 144 ntAPPRIS P1 BASIC27.18■■□□□ 1.94
COL1A2P08123 CCDC136-202ENST00000378685 1689 ntAPPRIS ALT2 TSL 2 BASIC27.17■■□□□ 1.94
COL1A2P08123 SHISA8-202ENST00000621082 1405 ntAPPRIS P2 TSL 5 BASIC27.17■■□□□ 1.94
COL1A2P08123 COL13A1-213ENST00000520267 2276 ntAPPRIS ALT2 TSL 5 BASIC27.17■■□□□ 1.94
COL1A2P08123 PLSCR3-209ENST00000574401 2032 ntAPPRIS P1 TSL 1 (best) BASIC27.17■■□□□ 1.94
COL1A2P08123 CDPF1-201ENST00000314567 1875 ntAPPRIS P2 TSL 1 (best) BASIC27.16■■□□□ 1.94
COL1A2P08123 MFSD12-201ENST00000355415 2124 ntAPPRIS P3 TSL 1 (best) BASIC27.16■■□□□ 1.94
COL1A2P08123 SLC16A3-214ENST00000582743 2002 ntAPPRIS P1 TSL 1 (best) BASIC27.16■■□□□ 1.94
COL1A2P08123 FAM159A-204ENST00000517870 748 ntAPPRIS P1 TSL 1 (best) BASIC27.16■■□□□ 1.94
COL1A2P08123 HDHD5-202ENST00000336737 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC27.16■■□□□ 1.94
COL1A2P08123 SERPING1-205ENST00000403558 2231 ntTSL 5 BASIC27.15■■□□□ 1.94
COL1A2P08123 GPR75-ASB3-201ENST00000406625 2113 ntAPPRIS P1 TSL 2 BASIC27.15■■□□□ 1.94
COL1A2P08123 AC116025.2-201ENST00000576632 443 ntTSL 3 BASIC27.15■■□□□ 1.94
COL1A2P08123 RASL10A-201ENST00000216101 1490 ntAPPRIS P1 TSL 1 (best) BASIC27.15■■□□□ 1.94
COL1A2P08123 MNX1-201ENST00000252971 2174 ntAPPRIS P3 TSL 1 (best) BASIC27.15■■□□□ 1.94
COL1A2P08123 SMARCD3-203ENST00000392811 2018 ntTSL 1 (best) BASIC27.14■■□□□ 1.94
COL1A2P08123 SSBP4-201ENST00000270061 1768 ntAPPRIS P3 TSL 1 (best) BASIC27.14■■□□□ 1.94
COL1A2P08123 PROSER2-202ENST00000379200 1232 ntAPPRIS ALT2 BASIC27.14■■□□□ 1.94
COL1A2P08123 RBM42-205ENST00000589871 1487 ntTSL 5 BASIC27.14■■□□□ 1.94
COL1A2P08123 NSMCE4A-202ENST00000369023 1394 ntAPPRIS P1 TSL 1 (best) BASIC27.14■■□□□ 1.93
COL1A2P08123 WDR38-202ENST00000613760 1323 ntAPPRIS ALT2 TSL 1 (best) BASIC27.13■■□□□ 1.93
COL1A2P08123 AC139795.1-203ENST00000515045 853 ntTSL 2 BASIC27.13■■□□□ 1.93
COL1A2P08123 AC018755.3-202ENST00000596210 929 ntBASIC27.13■■□□□ 1.93
COL1A2P08123 RNASET2-210ENST00000508775 1375 ntAPPRIS P1 TSL 1 (best) BASIC27.13■■□□□ 1.93
COL1A2P08123 CAPNS1-216ENST00000628306 1389 ntTSL 5 BASIC27.13■■□□□ 1.93
COL1A2P08123 RNF175-201ENST00000347063 1604 ntAPPRIS P1 TSL 1 (best) BASIC27.12■■□□□ 1.93
COL1A2P08123 AC142086.6-201ENST00000621154 1765 ntBASIC27.12■■□□□ 1.93
COL1A2P08123 LAT-201ENST00000354453 1713 ntAPPRIS ALT2 TSL 5 BASIC27.11■■□□□ 1.93
COL1A2P08123 CAPNS1-204ENST00000587718 1558 ntAPPRIS ALT2 TSL 1 (best) BASIC27.11■■□□□ 1.93
COL1A2P08123 LINC01233-202ENST00000598832 568 ntTSL 2 BASIC27.1■■□□□ 1.93
COL1A2P08123 ARHGDIA-203ENST00000541078 1517 ntAPPRIS P1 TSL 3 BASIC27.1■■□□□ 1.93
COL1A2P08123 SLC35A2-207ENST00000445167 1739 ntTSL 1 (best) BASIC27.1■■□□□ 1.93
COL1A2P08123 IDNK-203ENST00000405990 629 ntTSL 2 BASIC27.09■■□□□ 1.93
COL1A2P08123 C9orf147-202ENST00000457681 561 ntTSL 2 BASIC27.09■■□□□ 1.93
COL1A2P08123 WDR38-203ENST00000618744 1270 ntTSL 1 (best) BASIC27.09■■□□□ 1.93
COL1A2P08123 AC074183.2-201ENST00000623112 922 ntBASIC27.09■■□□□ 1.93
COL1A2P08123 KRTAP5-5-201ENST00000399676 933 ntAPPRIS P1 BASIC27.09■■□□□ 1.93
COL1A2P08123 RARRES2P1-201ENST00000474487 481 ntBASIC27.09■■□□□ 1.93
COL1A2P08123 SCN1B-201ENST00000262631 1670 ntAPPRIS P1 TSL 1 (best) BASIC27.08■■□□□ 1.93
Retrieved 100 of 98,524 protein–RNA pairs in 47.3 ms