Protein–RNA interactions for Protein: P04035

HMGCR, 3-hydroxy-3-methylglutaryl-coenzyme A reductase, humanhuman

Predictions only

Length 888 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCRP04035 PBX1-202ENST00000367897 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC28.15■■■□□ 2.1
HMGCRP04035 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC28.14■■■□□ 2.1
HMGCRP04035 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC28.14■■■□□ 2.1
HMGCRP04035 C17orf74-202ENST00000574034 1287 ntTSL 1 (best) BASIC28.14■■■□□ 2.1
HMGCRP04035 EGFL8-220ENST00000395512 1312 ntAPPRIS P1 TSL 1 (best) BASIC28.14■■■□□ 2.09
HMGCRP04035 AL160276.1-201ENST00000636672 1312 ntAPPRIS P1 TSL 5 BASIC28.14■■■□□ 2.09
HMGCRP04035 CDKN2B-202ENST00000380142 859 ntTSL 1 (best) BASIC28.13■■■□□ 2.09
HMGCRP04035 MTX2-204ENST00000443241 799 ntTSL 3 BASIC28.13■■■□□ 2.09
HMGCRP04035 LMAN2-208ENST00000515209 1149 ntAPPRIS ALT2 TSL 3 BASIC28.13■■■□□ 2.09
HMGCRP04035 LAT-217ENST00000630764 610 ntAPPRIS ALT2 TSL 5 BASIC28.13■■■□□ 2.09
HMGCRP04035 TM6SF1-202ENST00000322019 2074 ntAPPRIS P1 TSL 1 (best) BASIC28.12■■■□□ 2.09
HMGCRP04035 GPRC5B-202ENST00000535671 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC28.12■■■□□ 2.09
HMGCRP04035 SSX2IP-209ENST00000603677 1149 ntTSL 1 (best) BASIC28.12■■■□□ 2.09
HMGCRP04035 HAUS7-211ENST00000626181 414 ntAPPRIS ALT2 TSL 5 BASIC28.12■■■□□ 2.09
HMGCRP04035 KLHDC9-203ENST00000392192 1333 ntTSL 1 (best) BASIC28.12■■■□□ 2.09
HMGCRP04035 DNPEP-201ENST00000273075 2425 ntAPPRIS P3 TSL 1 (best) BASIC28.11■■■□□ 2.09
HMGCRP04035 AC064853.4-201ENST00000641394 363 ntAPPRIS P1 BASIC28.11■■■□□ 2.09
HMGCRP04035 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC28.1■■■□□ 2.09
HMGCRP04035 ARPC2-201ENST00000295685 1605 ntAPPRIS P1 TSL 1 (best) BASIC28.1■■■□□ 2.09
HMGCRP04035 RASL10A-201ENST00000216101 1490 ntAPPRIS P1 TSL 1 (best) BASIC28.09■■■□□ 2.09
HMGCRP04035 C16orf95-201ENST00000253461 953 ntAPPRIS P3 TSL 1 (best) BASIC28.09■■■□□ 2.09
HMGCRP04035 TSPAN10-204ENST00000611590 1068 ntAPPRIS ALT2 TSL 1 (best) BASIC28.09■■■□□ 2.09
HMGCRP04035 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC28.09■■■□□ 2.09
HMGCRP04035 NTN3-201ENST00000293973 1986 ntAPPRIS P1 TSL 1 (best) BASIC28.08■■■□□ 2.09
HMGCRP04035 KISS1-201ENST00000367194 709 ntAPPRIS P2 TSL 1 (best) BASIC28.08■■■□□ 2.09
HMGCRP04035 MPP6-203ENST00000409761 1703 ntTSL 5 BASIC28.08■■■□□ 2.09
HMGCRP04035 PQLC3-204ENST00000441908 1784 ntTSL 2 BASIC28.08■■■□□ 2.09
HMGCRP04035 COL13A1-210ENST00000517713 2007 ntAPPRIS ALT2 TSL 5 BASIC28.08■■■□□ 2.08
HMGCRP04035 KIAA2013-202ENST00000376576 2539 ntTSL 2 BASIC28.07■■■□□ 2.08
HMGCRP04035 OSCAR-202ENST00000351806 1375 ntAPPRIS ALT2 TSL 1 (best) BASIC28.07■■■□□ 2.08
HMGCRP04035 HMCES-202ENST00000389735 1763 ntAPPRIS P1 TSL 1 (best) BASIC28.06■■■□□ 2.08
HMGCRP04035 HOXC9-201ENST00000303450 1516 ntAPPRIS P1 TSL 1 (best) BASIC28.06■■■□□ 2.08
HMGCRP04035 SYT12-205ENST00000527043 1661 ntAPPRIS P1 TSL 1 (best) BASIC28.06■■■□□ 2.08
HMGCRP04035 KCNF1-201ENST00000295082 2289 ntAPPRIS P1 BASIC28.06■■■□□ 2.08
HMGCRP04035 C12orf75-201ENST00000443585 1366 ntAPPRIS P1 TSL 2 BASIC28.05■■■□□ 2.08
HMGCRP04035 ST7-AS1-201ENST00000456775 1889 ntBASIC28.05■■■□□ 2.08
HMGCRP04035 RNF146-205ENST00000477776 762 ntTSL 3 BASIC28.05■■■□□ 2.08
HMGCRP04035 ARHGDIA-203ENST00000541078 1517 ntAPPRIS P1 TSL 3 BASIC28.05■■■□□ 2.08
HMGCRP04035 MFSD12-202ENST00000389395 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC28.04■■■□□ 2.08
HMGCRP04035 MYCL-202ENST00000372816 1688 ntAPPRIS P3 TSL 2 BASIC28.04■■■□□ 2.08
HMGCRP04035 PHYH-201ENST00000263038 1577 ntAPPRIS P1 TSL 1 (best) BASIC28.04■■■□□ 2.08
HMGCRP04035 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC28.04■■■□□ 2.08
HMGCRP04035 C11orf91-201ENST00000379011 811 ntAPPRIS P1 TSL 1 (best) BASIC28.04■■■□□ 2.08
HMGCRP04035 TMEM191C-206ENST00000432134 1129 ntAPPRIS ALT2 TSL 5 BASIC28.04■■■□□ 2.08
HMGCRP04035 NKX2-5-204ENST00000521848 1027 ntTSL 2 BASIC28.04■■■□□ 2.08
HMGCRP04035 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC28.04■■■□□ 2.08
HMGCRP04035 ARL8A-201ENST00000272217 1793 ntAPPRIS P1 TSL 1 (best) BASIC28.04■■■□□ 2.08
HMGCRP04035 BOD1-202ENST00000311086 1562 ntAPPRIS P1 TSL 1 (best) BASIC28.03■■■□□ 2.08
HMGCRP04035 GALR2-201ENST00000329003 1364 ntAPPRIS P1 TSL 1 (best) BASIC28.03■■■□□ 2.08
HMGCRP04035 AC239859.2-201ENST00000444165 318 ntBASIC28.03■■■□□ 2.08
HMGCRP04035 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC28.03■■■□□ 2.08
HMGCRP04035 AC019171.1-201ENST00000601251 1056 ntBASIC28.03■■■□□ 2.08
HMGCRP04035 AL121906.1-201ENST00000606866 440 ntTSL 3 BASIC28.03■■■□□ 2.08
HMGCRP04035 AGAP3-216ENST00000479901 1881 ntTSL 5 BASIC28.02■■■□□ 2.08
HMGCRP04035 TSPAN33-201ENST00000486685 1863 ntAPPRIS P1 TSL 1 (best) BASIC28.02■■■□□ 2.08
HMGCRP04035 PQLC3-201ENST00000295083 1830 ntAPPRIS P1 TSL 1 (best) BASIC28.02■■■□□ 2.08
HMGCRP04035 ALKAL1-201ENST00000358543 1217 ntAPPRIS P2 TSL 1 (best) BASIC28.02■■■□□ 2.08
HMGCRP04035 OSCAR-206ENST00000391760 629 ntTSL 2 BASIC28.02■■■□□ 2.08
HMGCRP04035 HERC2P9-201ENST00000507787 1023 ntTSL 1 (best) BASIC28.02■■■□□ 2.08
HMGCRP04035 FAM149A-201ENST00000227065 2708 ntAPPRIS P2 TSL 1 (best) BASIC28.01■■■□□ 2.07
HMGCRP04035 ATF4-201ENST00000337304 2019 ntAPPRIS P1 TSL 1 (best) BASIC28.01■■■□□ 2.07
HMGCRP04035 PPP4C-214ENST00000627746 1301 ntTSL 5 BASIC28.01■■■□□ 2.07
HMGCRP04035 ACOT7-201ENST00000361521 2429 ntAPPRIS ALT2 TSL 1 (best) BASIC28.01■■■□□ 2.07
HMGCRP04035 CCNYL1-203ENST00000392209 1952 ntTSL 2 BASIC28■■■□□ 2.07
HMGCRP04035 LRRC10B-201ENST00000378075 2219 ntAPPRIS P1 BASIC28■■■□□ 2.07
HMGCRP04035 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC28■■■□□ 2.07
HMGCRP04035 MIR935-201ENST00000401179 91 ntBASIC28■■■□□ 2.07
HMGCRP04035 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC28■■■□□ 2.07
HMGCRP04035 PRR5-ARHGAP8-202ENST00000361473 2013 ntTSL 5 BASIC28■■■□□ 2.07
HMGCRP04035 FHL2-202ENST00000344213 1769 ntTSL 1 (best) BASIC27.99■■■□□ 2.07
HMGCRP04035 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC27.99■■■□□ 2.07
HMGCRP04035 TMPO-AS1-201ENST00000546421 738 ntTSL 5 BASIC27.99■■■□□ 2.07
HMGCRP04035 WTAP-207ENST00000631126 1430 ntTSL 3 BASIC27.99■■■□□ 2.07
HMGCRP04035 GLTP-201ENST00000318348 2356 ntAPPRIS P1 TSL 1 (best) BASIC27.99■■■□□ 2.07
HMGCRP04035 ABCB10P1-201ENST00000614297 2181 ntBASIC27.99■■■□□ 2.07
HMGCRP04035 TMEM171-202ENST00000454765 1535 ntAPPRIS P3 TSL 1 (best) BASIC27.98■■■□□ 2.07
HMGCRP04035 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC27.98■■■□□ 2.07
HMGCRP04035 Z92544.1-202ENST00000571933 1220 ntBASIC27.98■■■□□ 2.07
HMGCRP04035 FKBP1A-204ENST00000400137 1622 ntAPPRIS P1 TSL 1 (best) BASIC27.97■■■□□ 2.07
HMGCRP04035 PRR7-204ENST00000510492 1285 ntAPPRIS P1 TSL 1 (best) BASIC27.97■■■□□ 2.07
HMGCRP04035 RNASET2-210ENST00000508775 1375 ntAPPRIS P1 TSL 1 (best) BASIC27.97■■■□□ 2.07
HMGCRP04035 C1QTNF5-202ENST00000528368 1356 ntAPPRIS P1 TSL 1 (best) BASIC27.97■■■□□ 2.07
HMGCRP04035 ZAR1-201ENST00000327939 1460 ntAPPRIS P1 TSL 1 (best) BASIC27.96■■■□□ 2.07
HMGCRP04035 GATA4-207ENST00000532059 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC27.96■■■□□ 2.07
HMGCRP04035 HOXB3-212ENST00000498678 2196 ntAPPRIS P1 TSL 2 BASIC27.96■■■□□ 2.07
HMGCRP04035 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC27.96■■■□□ 2.07
HMGCRP04035 ARHGEF7-AS2-201ENST00000425094 1239 ntTSL 1 (best) BASIC27.96■■■□□ 2.07
HMGCRP04035 LSM7-203ENST00000585409 512 ntTSL 2 BASIC27.96■■■□□ 2.07
HMGCRP04035 AC008406.3-201ENST00000620001 1374 ntBASIC27.96■■■□□ 2.07
HMGCRP04035 AL359504.2-201ENST00000605506 1601 ntBASIC27.96■■■□□ 2.07
HMGCRP04035 ZNF513-201ENST00000323703 2139 ntAPPRIS P1 TSL 1 (best) BASIC27.95■■■□□ 2.07
HMGCRP04035 PPP1CC-208ENST00000551676 1581 ntTSL 2 BASIC27.95■■■□□ 2.07
HMGCRP04035 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC27.95■■■□□ 2.06
HMGCRP04035 TK2-216ENST00000564917 1156 ntTSL 3 BASIC27.95■■■□□ 2.06
HMGCRP04035 TNFRSF25-205ENST00000377782 1632 ntAPPRIS P4 TSL 1 (best) BASIC27.94■■■□□ 2.06
HMGCRP04035 CDCA5-202ENST00000404147 1012 ntTSL 2 BASIC27.94■■■□□ 2.06
HMGCRP04035 CT47A7-201ENST00000434883 1288 ntAPPRIS P1 TSL 2 BASIC27.94■■■□□ 2.06
HMGCRP04035 PRMT5-228ENST00000627278 129 ntTSL 5 BASIC27.94■■■□□ 2.06
HMGCRP04035 PI4KAP2-202ENST00000450651 2294 ntTSL 5 BASIC27.94■■■□□ 2.06
HMGCRP04035 YAP1-204ENST00000526343 2393 ntTSL 5 BASIC27.93■■■□□ 2.06
Retrieved 100 of 98,524 protein–RNA pairs in 62.9 ms