Protein–RNA interactions for Protein: P01906

HLA-DQA2, HLA class II histocompatibility antigen, DQ alpha 2 chain, humanhuman

Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA2P01906 ZNRF2P2-203ENST00000454624 420 ntBASIC21.85■■□□□ 1.09
HLA-DQA2P01906 AC092803.2-201ENST00000564287 1899 ntBASIC21.85■■□□□ 1.09
HLA-DQA2P01906 FUS-202ENST00000380244 1818 ntAPPRIS ALT2 TSL 1 (best) BASIC21.85■■□□□ 1.09
HLA-DQA2P01906 PTPA-202ENST00000347048 1989 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
HLA-DQA2P01906 ALG2-203ENST00000476832 1880 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
HLA-DQA2P01906 CTXN1-201ENST00000318978 1274 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
HLA-DQA2P01906 AC008813.1-201ENST00000536597 885 ntBASIC21.84■■□□□ 1.09
HLA-DQA2P01906 CAPN10-204ENST00000354082 1999 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
HLA-DQA2P01906 CTF1-202ENST00000395019 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC21.84■■□□□ 1.09
HLA-DQA2P01906 ST6GALNAC6-204ENST00000373144 2406 ntAPPRIS ALT1 TSL 1 (best) BASIC21.84■■□□□ 1.09
HLA-DQA2P01906 SOWAHD-201ENST00000343905 1552 ntAPPRIS P1 BASIC21.83■■□□□ 1.09
HLA-DQA2P01906 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC21.83■■□□□ 1.09
HLA-DQA2P01906 KDM4C-203ENST00000401787 1406 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
HLA-DQA2P01906 ANKRD9-205ENST00000560748 1413 ntAPPRIS P1 TSL 2 BASIC21.83■■□□□ 1.09
HLA-DQA2P01906 AC096888.1-201ENST00000487097 565 ntTSL 4 BASIC21.83■■□□□ 1.09
HLA-DQA2P01906 CAAP1-205ENST00000520187 773 ntTSL 5 BASIC21.83■■□□□ 1.09
HLA-DQA2P01906 C9orf50-201ENST00000372478 1620 ntAPPRIS P2 TSL 2 BASIC21.83■■□□□ 1.08
HLA-DQA2P01906 ECHDC3-201ENST00000379215 1649 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
HLA-DQA2P01906 MRPL4-201ENST00000253099 1455 ntAPPRIS P2 TSL 1 (best) BASIC21.83■■□□□ 1.08
HLA-DQA2P01906 TBX1-201ENST00000329705 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC21.83■■□□□ 1.08
HLA-DQA2P01906 DDX42-201ENST00000359353 2783 ntTSL 5 BASIC21.82■■□□□ 1.08
HLA-DQA2P01906 LACTBL1-202ENST00000618559 1500 ntAPPRIS ALT2 TSL 5 BASIC21.82■■□□□ 1.08
HLA-DQA2P01906 BTBD7-201ENST00000298896 2621 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
HLA-DQA2P01906 DHRS13-203ENST00000426464 1569 ntTSL 2 BASIC21.82■■□□□ 1.08
HLA-DQA2P01906 MPST-206ENST00000429360 1331 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
HLA-DQA2P01906 FKBP1A-204ENST00000400137 1622 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
HLA-DQA2P01906 NELFB-201ENST00000343053 2698 ntAPPRIS ALT2 TSL 1 (best) BASIC21.81■■□□□ 1.08
HLA-DQA2P01906 PDK1-202ENST00000392571 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC21.8■■□□□ 1.08
HLA-DQA2P01906 PPM1B-202ENST00000345249 1713 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
HLA-DQA2P01906 SNTA1-201ENST00000217381 2342 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
HLA-DQA2P01906 ANKRD53-201ENST00000272421 2185 ntAPPRIS P3 TSL 1 (best) BASIC21.8■■□□□ 1.08
HLA-DQA2P01906 LDLRAD3-203ENST00000528989 1879 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
HLA-DQA2P01906 KAZN-207ENST00000503743 1475 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
HLA-DQA2P01906 HES6-205ENST00000409356 528 ntTSL 2 BASIC21.8■■□□□ 1.08
HLA-DQA2P01906 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC21.8■■□□□ 1.08
HLA-DQA2P01906 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
HLA-DQA2P01906 NRG2-203ENST00000340391 1944 ntTSL 5 BASIC21.8■■□□□ 1.08
HLA-DQA2P01906 ATP8B2-201ENST00000368487 1523 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
HLA-DQA2P01906 ADAMTSL5-202ENST00000395467 1533 ntTSL 5 BASIC21.8■■□□□ 1.08
HLA-DQA2P01906 SNHG7-204ENST00000447221 2157 ntTSL 2 BASIC21.8■■□□□ 1.08
HLA-DQA2P01906 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC21.79■■□□□ 1.08
HLA-DQA2P01906 SRP68-202ENST00000539137 2386 ntTSL 2 BASIC21.79■■□□□ 1.08
HLA-DQA2P01906 SURF1-201ENST00000371974 1093 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
HLA-DQA2P01906 GNPTG-204ENST00000527137 386 ntTSL 2 BASIC21.79■■□□□ 1.08
HLA-DQA2P01906 SURF1-205ENST00000615505 991 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
HLA-DQA2P01906 UBE2J2-202ENST00000349431 1733 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
HLA-DQA2P01906 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC21.79■■□□□ 1.08
HLA-DQA2P01906 BICDL2-203ENST00000572449 1984 ntAPPRIS P1 TSL 5 BASIC21.79■■□□□ 1.08
HLA-DQA2P01906 SLC25A23-203ENST00000334510 1424 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
HLA-DQA2P01906 UBALD1-202ENST00000587615 799 ntTSL 2 BASIC21.78■■□□□ 1.08
HLA-DQA2P01906 CIB2-202ENST00000539011 1511 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
HLA-DQA2P01906 MIR219A2-201ENST00000608502 1504 ntBASIC21.78■■□□□ 1.08
HLA-DQA2P01906 ST7L-206ENST00000369666 1815 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
HLA-DQA2P01906 R3HCC1-201ENST00000265806 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC21.77■■□□□ 1.08
HLA-DQA2P01906 FBXL6-201ENST00000331890 1785 ntAPPRIS P3 TSL 1 (best) BASIC21.77■■□□□ 1.08
HLA-DQA2P01906 AC010907.1-201ENST00000441632 807 ntTSL 3 BASIC21.77■■□□□ 1.08
HLA-DQA2P01906 TRIM52-AS1-203ENST00000509252 529 ntTSL 3 BASIC21.77■■□□□ 1.08
HLA-DQA2P01906 RNF166-209ENST00000567844 633 ntTSL 5 BASIC21.77■■□□□ 1.08
HLA-DQA2P01906 SKOR2-203ENST00000620245 3048 ntAPPRIS ALT2 TSL 5 BASIC21.77■■□□□ 1.08
HLA-DQA2P01906 MYPOP-201ENST00000322217 1890 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
HLA-DQA2P01906 SERF1A-202ENST00000354833 1889 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
HLA-DQA2P01906 SERF1B-201ENST00000380750 1889 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
HLA-DQA2P01906 EMC10-206ENST00000598585 1610 ntAPPRIS ALT2 TSL 5 BASIC21.77■■□□□ 1.07
HLA-DQA2P01906 TMEM125-202ENST00000439858 1786 ntAPPRIS P1 TSL 2 BASIC21.76■■□□□ 1.07
HLA-DQA2P01906 PKDCC-201ENST00000294964 2502 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
HLA-DQA2P01906 SLC15A3-201ENST00000227880 2115 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
HLA-DQA2P01906 CRELD2-203ENST00000404488 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC21.76■■□□□ 1.07
HLA-DQA2P01906 SH3GL1-201ENST00000269886 2516 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
HLA-DQA2P01906 GTF2E2-201ENST00000355904 1762 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
HLA-DQA2P01906 TTBK2-207ENST00000567840 1961 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
HLA-DQA2P01906 ING2-201ENST00000302327 1189 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
HLA-DQA2P01906 TSPAN10-203ENST00000574882 1837 ntAPPRIS P2 TSL 1 (best) BASIC21.75■■□□□ 1.07
HLA-DQA2P01906 KLF3-AS1-202ENST00000440181 2368 ntTSL 2 BASIC21.75■■□□□ 1.07
HLA-DQA2P01906 POLR3H-201ENST00000337566 1330 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
HLA-DQA2P01906 P2RX2-203ENST00000350048 1344 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
HLA-DQA2P01906 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
HLA-DQA2P01906 SLC25A10-202ENST00000350690 1885 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
HLA-DQA2P01906 CAMK1D-203ENST00000615792 1725 ntTSL 5 BASIC21.75■■□□□ 1.07
HLA-DQA2P01906 DUSP8P4-201ENST00000399538 1761 ntBASIC21.74■■□□□ 1.07
HLA-DQA2P01906 GTPBP3-202ENST00000358792 1951 ntAPPRIS P4 TSL 2 BASIC21.74■■□□□ 1.07
HLA-DQA2P01906 AGPS-202ENST00000409888 815 ntTSL 4 BASIC21.74■■□□□ 1.07
HLA-DQA2P01906 AC148477.6-201ENST00000623746 465 ntBASIC21.74■■□□□ 1.07
HLA-DQA2P01906 U2AF1-204ENST00000459639 1675 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
HLA-DQA2P01906 U2AF1L5-204ENST00000623375 1675 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
HLA-DQA2P01906 TSGA13-204ENST00000456951 2046 ntAPPRIS P2 TSL 2 BASIC21.73■■□□□ 1.07
HLA-DQA2P01906 RINL-208ENST00000598904 1846 ntAPPRIS P3 TSL 5 BASIC21.73■■□□□ 1.07
HLA-DQA2P01906 TSPOAP1-AS1-205ENST00000580022 2337 ntTSL 2 BASIC21.73■■□□□ 1.07
HLA-DQA2P01906 CABP1-202ENST00000316803 1658 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
HLA-DQA2P01906 BTBD6-203ENST00000392554 2176 ntAPPRIS P2 TSL 1 (best) BASIC21.73■■□□□ 1.07
HLA-DQA2P01906 AURKAIP1-203ENST00000338370 1072 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
HLA-DQA2P01906 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC21.73■■□□□ 1.07
HLA-DQA2P01906 HS3ST6-201ENST00000454677 1273 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
HLA-DQA2P01906 CHST11-203ENST00000547956 936 ntTSL 2 BASIC21.73■■□□□ 1.07
HLA-DQA2P01906 COPZ2-210ENST00000621465 895 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
HLA-DQA2P01906 AC092902.2-221ENST00000628476 965 ntTSL 5 BASIC21.73■■□□□ 1.07
HLA-DQA2P01906 PPP1R3F-205ENST00000495799 1537 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
HLA-DQA2P01906 NRM-201ENST00000259953 1755 ntAPPRIS P2 TSL 2 BASIC21.73■■□□□ 1.07
HLA-DQA2P01906 VSTM2L-202ENST00000373461 1959 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
HLA-DQA2P01906 PCYT2-202ENST00000538721 1765 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
HLA-DQA2P01906 ABHD17AP4-201ENST00000411545 909 ntBASIC21.72■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 18.9 ms