Protein–RNA interactions for Protein: O75382

TRIM3, Tripartite motif-containing protein 3, humanhuman

Predicted RBP Predictions only

Length 744 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM3O75382 AL359258.2-201ENST00000564063 1566 ntBASIC22.72■■□□□ 1.23
TRIM3O75382 GTF2IP1-204ENST00000616377 2632 ntTSL 2 BASIC22.72■■□□□ 1.23
TRIM3O75382 ARPC2-201ENST00000295685 1605 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
TRIM3O75382 SHF-208ENST00000560734 1731 ntTSL 3 BASIC22.71■■□□□ 1.23
TRIM3O75382 CRIM1-201ENST00000280527 5912 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
TRIM3O75382 HDHD5-202ENST00000336737 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC22.71■■□□□ 1.23
TRIM3O75382 LINC01003-201ENST00000564834 1764 ntBASIC22.71■■□□□ 1.23
TRIM3O75382 TMEM64-201ENST00000418210 4663 ntTSL 2 BASIC22.71■■□□□ 1.23
TRIM3O75382 MDFIC-208ENST00000614186 1068 ntTSL 1 (best) BASIC22.71■■□□□ 1.23
TRIM3O75382 CYB5R3-201ENST00000352397 2124 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.23
TRIM3O75382 ZNF768-201ENST00000380412 2315 ntAPPRIS P2 TSL 1 (best) BASIC22.7■■□□□ 1.22
TRIM3O75382 IHH-201ENST00000295731 2023 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
TRIM3O75382 HDGF-201ENST00000357325 2380 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
TRIM3O75382 FBXL8-206ENST00000519917 1460 ntAPPRIS P1 TSL 5 BASIC22.69■■□□□ 1.22
TRIM3O75382 SSTR4-201ENST00000255008 1427 ntAPPRIS P1 BASIC22.69■■□□□ 1.22
TRIM3O75382 AL157400.5-201ENST00000507624 621 ntBASIC22.69■■□□□ 1.22
TRIM3O75382 VIPR2-203ENST00000402066 1926 ntAPPRIS ALT2 TSL 5 BASIC22.69■■□□□ 1.22
TRIM3O75382 REXO4-201ENST00000371935 1899 ntTSL 3 BASIC22.68■■□□□ 1.22
TRIM3O75382 LYPD6B-203ENST00000409642 1577 ntAPPRIS P3 TSL 1 (best) BASIC22.68■■□□□ 1.22
TRIM3O75382 ECEL1P2-201ENST00000461596 1295 ntBASIC22.68■■□□□ 1.22
TRIM3O75382 MIR1-1HG-202ENST00000624914 1220 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
TRIM3O75382 NPAS3-203ENST00000357798 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC22.67■■□□□ 1.22
TRIM3O75382 OTUD5-203ENST00000396743 2682 ntAPPRIS ALT1 TSL 1 (best) BASIC22.67■■□□□ 1.22
TRIM3O75382 CACNA1H-201ENST00000348261 8208 ntAPPRIS P4 TSL 1 (best) BASIC22.67■■□□□ 1.22
TRIM3O75382 DEDD-212ENST00000545495 2329 ntAPPRIS P1 TSL 3 BASIC22.67■■□□□ 1.22
TRIM3O75382 MOB2-207ENST00000614710 705 ntTSL 5 BASIC22.67■■□□□ 1.22
TRIM3O75382 SNAI3-AS1-204ENST00000567997 2048 ntBASIC22.66■■□□□ 1.22
TRIM3O75382 SAE1-209ENST00000598840 1831 ntTSL 5 BASIC22.66■■□□□ 1.22
TRIM3O75382 CARM1-202ENST00000344150 2722 ntAPPRIS ALT2 TSL 5 BASIC22.66■■□□□ 1.22
TRIM3O75382 C16orf72-201ENST00000327827 5953 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
TRIM3O75382 LMTK3-201ENST00000270238 4972 ntAPPRIS P2 TSL 1 (best) BASIC22.65■■□□□ 1.22
TRIM3O75382 FAM78B-201ENST00000338353 1597 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
TRIM3O75382 PXMP2-201ENST00000317479 957 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
TRIM3O75382 PLBD2-202ENST00000545182 2321 ntTSL 2 BASIC22.65■■□□□ 1.22
TRIM3O75382 SKOR2-203ENST00000620245 3048 ntAPPRIS ALT2 TSL 5 BASIC22.65■■□□□ 1.22
TRIM3O75382 C12orf75-201ENST00000443585 1366 ntAPPRIS P1 TSL 2 BASIC22.64■■□□□ 1.22
TRIM3O75382 CTU1-201ENST00000421832 2087 ntAPPRIS P1 TSL 2 BASIC22.64■■□□□ 1.22
TRIM3O75382 PTPA-202ENST00000347048 1989 ntTSL 1 (best) BASIC22.64■■□□□ 1.21
TRIM3O75382 RAD51-210ENST00000557850 1397 ntTSL 2 BASIC22.63■■□□□ 1.21
TRIM3O75382 FGF13-AS1-202ENST00000446383 584 ntTSL 3 BASIC22.63■■□□□ 1.21
TRIM3O75382 UPF3A-209ENST00000492270 494 ntTSL 2 BASIC22.63■■□□□ 1.21
TRIM3O75382 RPL27A-206ENST00000530022 878 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
TRIM3O75382 ABHD17AP5-201ENST00000580133 923 ntBASIC22.63■■□□□ 1.21
TRIM3O75382 HDGFL1-201ENST00000510882 2174 ntAPPRIS P1 BASIC22.63■■□□□ 1.21
TRIM3O75382 GATA2-AS1-202ENST00000468377 1578 ntTSL 2 BASIC22.63■■□□□ 1.21
TRIM3O75382 BIN1-210ENST00000393041 2272 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
TRIM3O75382 FANCE-201ENST00000229769 2554 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
TRIM3O75382 ZDHHC3-203ENST00000342790 1336 ntTSL 5 BASIC22.62■■□□□ 1.21
TRIM3O75382 SPG21-201ENST00000204566 1822 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
TRIM3O75382 FKBP1A-204ENST00000400137 1622 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
TRIM3O75382 MAPK3-205ENST00000395202 1008 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
TRIM3O75382 LTC4S-205ENST00000486713 496 ntTSL 2 BASIC22.62■■□□□ 1.21
TRIM3O75382 NPW-202ENST00000566435 991 ntAPPRIS ALT2 TSL 1 (best) BASIC22.62■■□□□ 1.21
TRIM3O75382 FAM57A-202ENST00000308278 2412 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
TRIM3O75382 ETS1-201ENST00000319397 2231 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
TRIM3O75382 OTUD5-202ENST00000376488 2692 ntAPPRIS ALT1 TSL 1 (best) BASIC22.62■■□□□ 1.21
TRIM3O75382 PSMG1-201ENST00000331573 2154 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
TRIM3O75382 FGF20-201ENST00000180166 1688 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
TRIM3O75382 RAB40C-204ENST00000538492 2569 ntAPPRIS P1 TSL 2 BASIC22.61■■□□□ 1.21
TRIM3O75382 WHAMMP3-201ENST00000611636 1609 ntBASIC22.61■■□□□ 1.21
TRIM3O75382 PROCA1-201ENST00000301039 1566 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
TRIM3O75382 TNFRSF4-201ENST00000379236 1068 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
TRIM3O75382 ANKRD65-205ENST00000537107 2190 ntAPPRIS P1 TSL 5 BASIC22.61■■□□□ 1.21
TRIM3O75382 GNG10-201ENST00000374293 1491 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
TRIM3O75382 RAD21-AS1-201ENST00000521487 2010 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
TRIM3O75382 AC018755.3-201ENST00000598755 664 ntTSL 2 BASIC22.6■■□□□ 1.21
TRIM3O75382 FCGRT-217ENST00000599988 660 ntTSL 5 BASIC22.6■■□□□ 1.21
TRIM3O75382 OXSR1-203ENST00000446845 1908 ntTSL 5 BASIC22.59■■□□□ 1.21
TRIM3O75382 C11orf80-210ENST00000527634 1666 ntAPPRIS ALT2 TSL 5 BASIC22.59■■□□□ 1.21
TRIM3O75382 CD6-206ENST00000452451 1782 ntAPPRIS ALT2 TSL 1 (best) BASIC22.59■■□□□ 1.21
TRIM3O75382 PLEKHJ1-204ENST00000586608 935 ntTSL 3 BASIC22.59■■□□□ 1.21
TRIM3O75382 KCNMA1-283ENST00000640523 5425 ntAPPRIS ALT2 TSL 5 BASIC22.59■■□□□ 1.21
TRIM3O75382 CADPS-203ENST00000383710 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC22.59■■□□□ 1.21
TRIM3O75382 POU3F3-201ENST00000361360 3064 ntAPPRIS P1 BASIC22.59■■□□□ 1.21
TRIM3O75382 TIMM29-201ENST00000270502 1425 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
TRIM3O75382 DSG2-201ENST00000261590 5831 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
TRIM3O75382 PKM-203ENST00000389093 2279 ntTSL 5 BASIC22.58■■□□□ 1.21
TRIM3O75382 TTC36-201ENST00000302783 874 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
TRIM3O75382 EMID1-202ENST00000404755 2049 ntTSL 5 BASIC22.57■■□□□ 1.2
TRIM3O75382 ZNF639-209ENST00000496856 2033 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
TRIM3O75382 ABL2-203ENST00000392043 2140 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
TRIM3O75382 PACS2-201ENST00000325438 3708 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
TRIM3O75382 ENDOG-201ENST00000372642 1172 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
TRIM3O75382 TAZ-213ENST00000601016 1889 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
TRIM3O75382 NXPH3-201ENST00000328741 2179 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
TRIM3O75382 PKM-204ENST00000449901 2526 ntTSL 2 BASIC22.57■■□□□ 1.2
TRIM3O75382 ST6GALNAC6-204ENST00000373144 2406 ntAPPRIS ALT1 TSL 1 (best) BASIC22.57■■□□□ 1.2
TRIM3O75382 ACAA1-220ENST00000627515 1862 ntTSL 5 BASIC22.56■■□□□ 1.2
TRIM3O75382 FOXO6-202ENST00000641094 1476 ntAPPRIS P1 BASIC22.56■■□□□ 1.2
TRIM3O75382 LOR-201ENST00000368742 1230 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
TRIM3O75382 DNAJB2-202ENST00000392086 1946 ntAPPRIS P1 TSL 2 BASIC22.56■■□□□ 1.2
TRIM3O75382 SHD-201ENST00000543264 2577 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
TRIM3O75382 PDK1-202ENST00000392571 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC22.56■■□□□ 1.2
TRIM3O75382 CAPNS1-215ENST00000628018 1509 ntAPPRIS ALT2 TSL 5 BASIC22.56■■□□□ 1.2
TRIM3O75382 PTGER1-201ENST00000292513 1421 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
TRIM3O75382 PPAN-202ENST00000393793 1575 ntTSL 5 BASIC22.55■■□□□ 1.2
TRIM3O75382 RPUSD1-207ENST00000565809 1918 ntTSL 2 BASIC22.55■■□□□ 1.2
TRIM3O75382 CTSA-203ENST00000372459 1972 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
TRIM3O75382 PPP1R26-201ENST00000356818 4932 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
TRIM3O75382 PQLC3-201ENST00000295083 1830 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
Retrieved 100 of 98,524 protein–RNA pairs in 111.1 ms