Protein–RNA interactions for Protein: O43543

XRCC2, DNA repair protein XRCC2, humanhuman

Predictions only

Length 280 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC2O43543 AL359258.2-201ENST00000564063 1566 ntBASIC21.26■□□□□ 0.99
XRCC2O43543 BOK-AS1-201ENST00000434306 643 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
XRCC2O43543 C16orf95-205ENST00000567970 1031 ntAPPRIS ALT2 TSL 5 BASIC21.25■□□□□ 0.99
XRCC2O43543 KCTD15-206ENST00000588881 1211 ntAPPRIS P1 TSL 2 BASIC21.25■□□□□ 0.99
XRCC2O43543 ARL6IP4-211ENST00000454885 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
XRCC2O43543 CAMK1D-203ENST00000615792 1725 ntTSL 5 BASIC21.24■□□□□ 0.99
XRCC2O43543 YBX2-201ENST00000007699 1590 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
XRCC2O43543 NRG2-203ENST00000340391 1944 ntTSL 5 BASIC21.24■□□□□ 0.99
XRCC2O43543 FEZ2-204ENST00000405912 1931 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
XRCC2O43543 TLE6-201ENST00000246112 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
XRCC2O43543 BTBD6-204ENST00000463376 2195 ntAPPRIS ALT2 TSL 2 BASIC21.24■□□□□ 0.99
XRCC2O43543 DTNBP1-212ENST00000622898 1305 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
XRCC2O43543 R3HCC1-201ENST00000265806 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
XRCC2O43543 LSM7-201ENST00000252622 529 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
XRCC2O43543 ANKS3-203ENST00000450067 2272 ntTSL 5 BASIC21.23■□□□□ 0.99
XRCC2O43543 PPP1R3F-205ENST00000495799 1537 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
XRCC2O43543 TSGA13-204ENST00000456951 2046 ntAPPRIS P2 TSL 2 BASIC21.22■□□□□ 0.99
XRCC2O43543 CACNG7-203ENST00000391767 2688 ntAPPRIS P1 TSL 5 BASIC21.22■□□□□ 0.99
XRCC2O43543 ST7L-206ENST00000369666 1815 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
XRCC2O43543 RINL-208ENST00000598904 1846 ntAPPRIS P3 TSL 5 BASIC21.22■□□□□ 0.99
XRCC2O43543 MSANTD2-201ENST00000239614 2495 ntTSL 2 BASIC21.22■□□□□ 0.99
XRCC2O43543 PLPPR3-201ENST00000359894 2387 ntAPPRIS P3 TSL 1 (best) BASIC21.22■□□□□ 0.99
XRCC2O43543 RPS20-211ENST00000524349 752 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
XRCC2O43543 DEAF1-201ENST00000382409 2500 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
XRCC2O43543 PLBD2-202ENST00000545182 2321 ntTSL 2 BASIC21.22■□□□□ 0.99
XRCC2O43543 OTUD5-202ENST00000376488 2692 ntAPPRIS ALT1 TSL 1 (best) BASIC21.22■□□□□ 0.99
XRCC2O43543 FGF20-201ENST00000180166 1688 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
XRCC2O43543 U2AF1-204ENST00000459639 1675 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
XRCC2O43543 U2AF1L5-204ENST00000623375 1675 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
XRCC2O43543 TTC3-225ENST00000540756 2025 ntTSL 2 BASIC21.21■□□□□ 0.99
XRCC2O43543 AL118558.1-203ENST00000553701 447 ntTSL 3 BASIC21.21■□□□□ 0.99
XRCC2O43543 RPARP-AS1-205ENST00000596045 431 ntTSL 3 BASIC21.21■□□□□ 0.99
XRCC2O43543 SKOR2-203ENST00000620245 3048 ntAPPRIS ALT2 TSL 5 BASIC21.21■□□□□ 0.99
XRCC2O43543 LINC00588-201ENST00000521663 1875 ntTSL 2 BASIC21.21■□□□□ 0.99
XRCC2O43543 VSTM2L-202ENST00000373461 1959 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
XRCC2O43543 AJAP1-201ENST00000378190 2383 ntAPPRIS P1 TSL 5 BASIC21.21■□□□□ 0.99
XRCC2O43543 RTN2-208ENST00000590526 2357 ntTSL 5 BASIC21.21■□□□□ 0.99
XRCC2O43543 AC091060.1-201ENST00000623524 1766 ntBASIC21.2■□□□□ 0.99
XRCC2O43543 AKAP17A-202ENST00000381261 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
XRCC2O43543 TP53I3-201ENST00000238721 1998 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
XRCC2O43543 MAP4K3-211ENST00000484274 407 ntTSL 2 BASIC21.2■□□□□ 0.98
XRCC2O43543 PVT1-219ENST00000523427 938 ntTSL 3 BASIC21.2■□□□□ 0.98
XRCC2O43543 UBA52-204ENST00000595158 743 ntAPPRIS P1 TSL 3 BASIC21.2■□□□□ 0.98
XRCC2O43543 REXO4-202ENST00000371942 2360 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
XRCC2O43543 KIAA2013-201ENST00000376572 2815 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
XRCC2O43543 IFFO2-203ENST00000455833 6188 ntAPPRIS P1 TSL 5 BASIC21.19■□□□□ 0.98
XRCC2O43543 NRM-201ENST00000259953 1755 ntAPPRIS P2 TSL 2 BASIC21.19■□□□□ 0.98
XRCC2O43543 TAF10-201ENST00000299424 1215 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
XRCC2O43543 FAM168B-201ENST00000389915 944 ntAPPRIS P1 TSL 3 BASIC21.19■□□□□ 0.98
XRCC2O43543 PQLC3-201ENST00000295083 1830 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
XRCC2O43543 BAMBI-201ENST00000375533 1877 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
XRCC2O43543 FGF19-201ENST00000294312 2447 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
XRCC2O43543 DLX2-202ENST00000466293 1852 ntTSL 2 BASIC21.18■□□□□ 0.98
XRCC2O43543 BAX-202ENST00000345358 793 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
XRCC2O43543 WNT5A-AS1-201ENST00000469484 500 ntTSL 3 BASIC21.18■□□□□ 0.98
XRCC2O43543 MED25-210ENST00000612854 801 ntTSL 5 BASIC21.18■□□□□ 0.98
XRCC2O43543 MED25-213ENST00000620467 1293 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
XRCC2O43543 MED25-214ENST00000622402 642 ntTSL 5 BASIC21.18■□□□□ 0.98
XRCC2O43543 JAG2-202ENST00000347004 5720 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
XRCC2O43543 ATOH7-201ENST00000373673 1480 ntAPPRIS P1 BASIC21.18■□□□□ 0.98
XRCC2O43543 SPOCK3-221ENST00000512648 1456 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
XRCC2O43543 CASP9-202ENST00000348549 1621 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
XRCC2O43543 AC009041.3-201ENST00000564390 879 ntTSL 5 BASIC21.17■□□□□ 0.98
XRCC2O43543 MXD3-201ENST00000423571 1534 ntTSL 2 BASIC21.17■□□□□ 0.98
XRCC2O43543 GTF2E2-201ENST00000355904 1762 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
XRCC2O43543 TSPAN10-203ENST00000574882 1837 ntAPPRIS P2 TSL 1 (best) BASIC21.17■□□□□ 0.98
XRCC2O43543 AC145676.1-201ENST00000514988 2004 ntBASIC21.17■□□□□ 0.98
XRCC2O43543 FAM220A-206ENST00000616824 2211 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
XRCC2O43543 ALG2-203ENST00000476832 1880 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
XRCC2O43543 AC092803.2-201ENST00000564287 1899 ntBASIC21.16■□□□□ 0.98
XRCC2O43543 POU2F2-208ENST00000529952 1716 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
XRCC2O43543 MIR639-201ENST00000384974 98 ntBASIC21.16■□□□□ 0.98
XRCC2O43543 SLC25A10-202ENST00000350690 1885 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
XRCC2O43543 FBXL6-201ENST00000331890 1785 ntAPPRIS P3 TSL 1 (best) BASIC21.15■□□□□ 0.98
XRCC2O43543 ACOT12-204ENST00000513751 612 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
XRCC2O43543 TMEM150A-201ENST00000306353 1484 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
XRCC2O43543 VEGFA-202ENST00000324450 954 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
XRCC2O43543 VEGFA-203ENST00000372055 1286 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
XRCC2O43543 VEGFA-208ENST00000417285 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.97
XRCC2O43543 VEGFA-213ENST00000482630 1146 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
XRCC2O43543 VEGFA-227ENST00000615393 984 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
XRCC2O43543 VEGFA-228ENST00000617771 1116 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
XRCC2O43543 VEGFA-229ENST00000621747 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.97
XRCC2O43543 VEGFA-230ENST00000640482 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.97
XRCC2O43543 VEGFA-232ENST00000640653 1170 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.97
XRCC2O43543 SSBP4-201ENST00000270061 1768 ntAPPRIS P3 TSL 1 (best) BASIC21.14■□□□□ 0.97
XRCC2O43543 COMT-204ENST00000403710 1548 ntAPPRIS P3 TSL 5 BASIC21.14■□□□□ 0.97
XRCC2O43543 DDX42-201ENST00000359353 2783 ntTSL 5 BASIC21.13■□□□□ 0.97
XRCC2O43543 HSD17B12-202ENST00000395700 994 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
XRCC2O43543 NPAS3-201ENST00000346562 5847 ntAPPRIS P3 TSL 1 (best) BASIC21.13■□□□□ 0.97
XRCC2O43543 PORCN-202ENST00000355961 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC21.13■□□□□ 0.97
XRCC2O43543 SRP68-202ENST00000539137 2386 ntTSL 2 BASIC21.12■□□□□ 0.97
XRCC2O43543 AL359504.2-201ENST00000605506 1601 ntBASIC21.12■□□□□ 0.97
XRCC2O43543 SERF1A-202ENST00000354833 1889 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
XRCC2O43543 SERF1B-201ENST00000380750 1889 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
XRCC2O43543 CCND3-205ENST00000415497 1843 ntTSL 2 BASIC21.12■□□□□ 0.97
XRCC2O43543 PPM1B-202ENST00000345249 1713 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
XRCC2O43543 CCDC136-202ENST00000378685 1689 ntAPPRIS ALT2 TSL 2 BASIC21.12■□□□□ 0.97
XRCC2O43543 DEDD-212ENST00000545495 2329 ntAPPRIS P1 TSL 3 BASIC21.11■□□□□ 0.97
XRCC2O43543 GPS1-204ENST00000392358 2276 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 69.8 ms