Protein–RNA interactions for Protein: O14493

CLDN4, Claudin-4, humanhuman

Predictions only

Length 209 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN4O14493 SLC25A6-201ENST00000381401 2062 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
CLDN4O14493 RAB3IL1-202ENST00000394836 2284 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
CLDN4O14493 ECHDC3-201ENST00000379215 1649 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
CLDN4O14493 RARRES2P2-201ENST00000394842 485 ntBASIC23.12■■□□□ 1.29
CLDN4O14493 AP004609.3-201ENST00000610705 1884 ntBASIC23.12■■□□□ 1.29
CLDN4O14493 JAG2-202ENST00000347004 5720 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
CLDN4O14493 AC142472.1-201ENST00000612013 1741 ntBASIC23.11■■□□□ 1.29
CLDN4O14493 PHYH-201ENST00000263038 1577 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
CLDN4O14493 MDFIC-206ENST00000448022 484 ntTSL 2 BASIC23.11■■□□□ 1.29
CLDN4O14493 PIK3R2-207ENST00000617130 2187 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
CLDN4O14493 FAM66E-202ENST00000533615 2087 ntTSL 2 BASIC23.1■■□□□ 1.29
CLDN4O14493 C1QTNF5-202ENST00000528368 1356 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
CLDN4O14493 CLK2-203ENST00000368361 2166 ntAPPRIS ALT1 TSL 1 (best) BASIC23.1■■□□□ 1.29
CLDN4O14493 RSPH1-201ENST00000291536 1430 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
CLDN4O14493 PXMP2-201ENST00000317479 957 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
CLDN4O14493 VIPR2-204ENST00000421760 717 ntTSL 3 BASIC23.09■■□□□ 1.29
CLDN4O14493 FGF13-AS1-202ENST00000446383 584 ntTSL 3 BASIC23.09■■□□□ 1.29
CLDN4O14493 PTGER1-201ENST00000292513 1421 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
CLDN4O14493 RNF19B-201ENST00000235150 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC23.08■■□□□ 1.29
CLDN4O14493 UPF3A-209ENST00000492270 494 ntTSL 2 BASIC23.08■■□□□ 1.29
CLDN4O14493 AC025884.2-201ENST00000553429 711 ntBASIC23.08■■□□□ 1.29
CLDN4O14493 C16orf52-207ENST00000569656 1257 ntTSL 5 BASIC23.08■■□□□ 1.29
CLDN4O14493 ZIC2-201ENST00000376335 2983 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
CLDN4O14493 C9orf40-201ENST00000376854 2327 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.28
CLDN4O14493 ZNF653-201ENST00000293771 2240 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.28
CLDN4O14493 IRAK1-205ENST00000429936 2127 ntTSL 5 BASIC23.08■■□□□ 1.28
CLDN4O14493 NPDC1-201ENST00000371600 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC23.07■■□□□ 1.28
CLDN4O14493 CARM1-202ENST00000344150 2722 ntAPPRIS ALT2 TSL 5 BASIC23.07■■□□□ 1.28
CLDN4O14493 HOXB3-201ENST00000311626 2642 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
CLDN4O14493 PFN2-211ENST00000489155 636 ntTSL 4 BASIC23.07■■□□□ 1.28
CLDN4O14493 UNCX-201ENST00000316333 2048 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
CLDN4O14493 MIR3960-201ENST00000583311 91 ntBASIC23.06■■□□□ 1.28
CLDN4O14493 FCGRT-217ENST00000599988 660 ntTSL 5 BASIC23.06■■□□□ 1.28
CLDN4O14493 SP8-202ENST00000418710 1618 ntAPPRIS ALT2 TSL 1 (best) BASIC23.06■■□□□ 1.28
CLDN4O14493 DNAJC21-201ENST00000342382 2309 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
CLDN4O14493 ARPC5L-202ENST00000353214 2507 ntAPPRIS P1 TSL 2 BASIC23.06■■□□□ 1.28
CLDN4O14493 HOXC9-201ENST00000303450 1516 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
CLDN4O14493 OPRD1-202ENST00000621425 1217 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
CLDN4O14493 FUS-202ENST00000380244 1818 ntAPPRIS ALT2 TSL 1 (best) BASIC23.04■■□□□ 1.28
CLDN4O14493 PWWP2B-201ENST00000305233 2651 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
CLDN4O14493 PLEKHJ1-204ENST00000586608 935 ntTSL 3 BASIC23.04■■□□□ 1.28
CLDN4O14493 STOML1-202ENST00000316911 1891 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
CLDN4O14493 ZCCHC2-201ENST00000269499 5959 ntAPPRIS P2 TSL 5 BASIC23.04■■□□□ 1.28
CLDN4O14493 SSTR5-201ENST00000293897 1362 ntAPPRIS P1 BASIC23.03■■□□□ 1.28
CLDN4O14493 AL121749.1-202ENST00000609313 2153 ntBASIC23.03■■□□□ 1.28
CLDN4O14493 NPAS3-201ENST00000346562 5847 ntAPPRIS P3 TSL 1 (best) BASIC23.03■■□□□ 1.28
CLDN4O14493 LOR-201ENST00000368742 1230 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
CLDN4O14493 NKIRAS2-208ENST00000462043 585 ntTSL 4 BASIC23.03■■□□□ 1.28
CLDN4O14493 AC007029.1-201ENST00000604183 313 ntBASIC23.03■■□□□ 1.28
CLDN4O14493 TANGO2-214ENST00000447208 2086 ntTSL 3 BASIC23.03■■□□□ 1.28
CLDN4O14493 FADD-201ENST00000301838 1841 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
CLDN4O14493 TSGA13-204ENST00000456951 2046 ntAPPRIS P2 TSL 2 BASIC23.03■■□□□ 1.28
CLDN4O14493 FRAT2-201ENST00000371019 2213 ntAPPRIS P1 BASIC23.02■■□□□ 1.28
CLDN4O14493 RAD51-210ENST00000557850 1397 ntTSL 2 BASIC23.02■■□□□ 1.28
CLDN4O14493 PKIG-205ENST00000372891 1443 ntAPPRIS P1 TSL 2 BASIC23.02■■□□□ 1.28
CLDN4O14493 RINL-208ENST00000598904 1846 ntAPPRIS P3 TSL 5 BASIC23.02■■□□□ 1.28
CLDN4O14493 TMEM150A-201ENST00000306353 1484 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
CLDN4O14493 FOXO6-202ENST00000641094 1476 ntAPPRIS P1 BASIC23.02■■□□□ 1.28
CLDN4O14493 CNNM2-201ENST00000369875 2059 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
CLDN4O14493 POTEF-201ENST00000361163 1586 ntTSL 5 BASIC23.01■■□□□ 1.27
CLDN4O14493 VSTM2L-202ENST00000373461 1959 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
CLDN4O14493 SSTR4-201ENST00000255008 1427 ntAPPRIS P1 BASIC23.01■■□□□ 1.27
CLDN4O14493 MAPK3-203ENST00000395199 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC23.01■■□□□ 1.27
CLDN4O14493 MAPK3-205ENST00000395202 1008 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
CLDN4O14493 AC007383.2-202ENST00000435627 482 ntTSL 2 BASIC23.01■■□□□ 1.27
CLDN4O14493 ARL6IP4-208ENST00000439686 796 ntAPPRIS ALT2 TSL 3 BASIC23.01■■□□□ 1.27
CLDN4O14493 RP9P-202ENST00000450133 1212 ntBASIC23.01■■□□□ 1.27
CLDN4O14493 VEGFA-209ENST00000425836 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC23.01■■□□□ 1.27
CLDN4O14493 ST7L-206ENST00000369666 1815 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
CLDN4O14493 HAND2-201ENST00000359562 2780 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
CLDN4O14493 CCDC136-202ENST00000378685 1689 ntAPPRIS ALT2 TSL 2 BASIC23■■□□□ 1.27
CLDN4O14493 PQLC3-204ENST00000441908 1784 ntTSL 2 BASIC23■■□□□ 1.27
CLDN4O14493 MXD3-201ENST00000423571 1534 ntTSL 2 BASIC23■■□□□ 1.27
CLDN4O14493 ENDOG-201ENST00000372642 1172 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
CLDN4O14493 NPW-202ENST00000566435 991 ntAPPRIS ALT2 TSL 1 (best) BASIC23■■□□□ 1.27
CLDN4O14493 PICK1-201ENST00000356976 2055 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
CLDN4O14493 BARX1-202ENST00000401724 1323 ntTSL 1 (best) BASIC23■■□□□ 1.27
CLDN4O14493 AKAP8L-208ENST00000595465 1933 ntTSL 2 BASIC23■■□□□ 1.27
CLDN4O14493 NKPD1-202ENST00000589776 1950 ntAPPRIS P1 BASIC23■■□□□ 1.27
CLDN4O14493 ZDHHC16-204ENST00000370842 1877 ntAPPRIS ALT1 TSL 5 BASIC22.99■■□□□ 1.27
CLDN4O14493 ARHGEF7-AS2-201ENST00000425094 1239 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
CLDN4O14493 FLVCR1-AS1-203ENST00000426161 892 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
CLDN4O14493 HECA-201ENST00000367658 5614 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
CLDN4O14493 ZNF768-201ENST00000380412 2315 ntAPPRIS P2 TSL 1 (best) BASIC22.98■■□□□ 1.27
CLDN4O14493 TCFL5-201ENST00000217162 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC22.98■■□□□ 1.27
CLDN4O14493 TCFL5-202ENST00000335351 2456 ntAPPRIS P2 TSL 1 (best) BASIC22.98■■□□□ 1.27
CLDN4O14493 GFER-205ENST00000569451 517 ntTSL 5 BASIC22.98■■□□□ 1.27
CLDN4O14493 ABHD17AP5-201ENST00000580133 923 ntBASIC22.98■■□□□ 1.27
CLDN4O14493 EPHB2-207ENST00000544305 1709 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
CLDN4O14493 DNMT3A-206ENST00000406659 1775 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
CLDN4O14493 IGFBP7-201ENST00000295666 1427 ntAPPRIS P3 TSL 1 (best) BASIC22.98■■□□□ 1.27
CLDN4O14493 NRG2-203ENST00000340391 1944 ntTSL 5 BASIC22.98■■□□□ 1.27
CLDN4O14493 ZSCAN18-202ENST00000421612 1488 ntTSL 4 BASIC22.98■■□□□ 1.27
CLDN4O14493 ZDHHC16-207ENST00000393760 2014 ntAPPRIS P4 TSL 1 (best) BASIC22.98■■□□□ 1.27
CLDN4O14493 COMT-204ENST00000403710 1548 ntAPPRIS P3 TSL 5 BASIC22.98■■□□□ 1.27
CLDN4O14493 TM6SF1-204ENST00000379390 1638 ntTSL 1 (best) BASIC22.97■■□□□ 1.27
CLDN4O14493 CAMKK1-201ENST00000158166 2459 ntTSL 1 (best) BASIC22.97■■□□□ 1.27
CLDN4O14493 WBP1-202ENST00000393972 1325 ntTSL 2 BASIC22.97■■□□□ 1.27
CLDN4O14493 CTF1-202ENST00000395019 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC22.96■■□□□ 1.27
CLDN4O14493 ROM1-201ENST00000278833 1878 ntAPPRIS P2 TSL 1 (best) BASIC22.95■■□□□ 1.26
Retrieved 100 of 98,524 protein–RNA pairs in 89.3 ms