Protein–RNA interactions for Protein: O00570

SOX1, Transcription factor SOX-1, humanhuman

Predicted RBP Predictions only

Length 391 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX1O00570 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC26.93■■□□□ 1.9
SOX1O00570 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC26.93■■□□□ 1.9
SOX1O00570 TMEM171-202ENST00000454765 1535 ntAPPRIS P3 TSL 1 (best) BASIC26.92■■□□□ 1.9
SOX1O00570 C5orf38-202ENST00000397835 681 ntAPPRIS ALT2 TSL 5 BASIC26.92■■□□□ 1.9
SOX1O00570 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC26.92■■□□□ 1.9
SOX1O00570 TMEM191C-206ENST00000432134 1129 ntAPPRIS ALT2 TSL 5 BASIC26.91■■□□□ 1.9
SOX1O00570 RPP21-222ENST00000433076 577 ntTSL 2 BASIC26.91■■□□□ 1.9
SOX1O00570 TIMM29-201ENST00000270502 1425 ntAPPRIS P1 TSL 1 (best) BASIC26.9■■□□□ 1.9
SOX1O00570 MLST8-203ENST00000397124 1691 ntAPPRIS P3 TSL 5 BASIC26.9■■□□□ 1.9
SOX1O00570 MEST-211ENST00000437945 1455 ntTSL 5 BASIC26.9■■□□□ 1.9
SOX1O00570 OSCAR-202ENST00000351806 1375 ntAPPRIS ALT2 TSL 1 (best) BASIC26.9■■□□□ 1.9
SOX1O00570 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC26.9■■□□□ 1.9
SOX1O00570 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC26.9■■□□□ 1.9
SOX1O00570 AC096631.2-201ENST00000436136 790 ntBASIC26.9■■□□□ 1.9
SOX1O00570 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC26.9■■□□□ 1.9
SOX1O00570 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC26.89■■□□□ 1.9
SOX1O00570 BX664725.1-201ENST00000438252 379 ntBASIC26.89■■□□□ 1.9
SOX1O00570 AC010907.1-201ENST00000441632 807 ntTSL 3 BASIC26.89■■□□□ 1.9
SOX1O00570 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC26.89■■□□□ 1.9
SOX1O00570 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC26.89■■□□□ 1.9
SOX1O00570 EBPL-204ENST00000378272 766 ntTSL 3 BASIC26.88■■□□□ 1.89
SOX1O00570 SRR-208ENST00000576848 588 ntTSL 4 BASIC26.88■■□□□ 1.89
SOX1O00570 EFNA1-202ENST00000368407 1926 ntAPPRIS P1 TSL 1 (best) BASIC26.88■■□□□ 1.89
SOX1O00570 SDCCAG3-202ENST00000357365 2304 ntAPPRIS P4 TSL 5 BASIC26.88■■□□□ 1.89
SOX1O00570 TXNRD2-205ENST00000400525 1874 ntTSL 5 BASIC26.87■■□□□ 1.89
SOX1O00570 AL121987.2-201ENST00000418602 1578 ntTSL 2 BASIC26.87■■□□□ 1.89
SOX1O00570 MAZ-205ENST00000562337 1574 ntTSL 3 BASIC26.87■■□□□ 1.89
SOX1O00570 SLC35D2-201ENST00000253270 1613 ntAPPRIS P1 TSL 1 (best) BASIC26.87■■□□□ 1.89
SOX1O00570 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC26.86■■□□□ 1.89
SOX1O00570 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC26.86■■□□□ 1.89
SOX1O00570 TSPY9P-201ENST00000440215 945 ntBASIC26.86■■□□□ 1.89
SOX1O00570 TSPY11P-201ENST00000442607 1045 ntBASIC26.86■■□□□ 1.89
SOX1O00570 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC26.86■■□□□ 1.89
SOX1O00570 WTAP-207ENST00000631126 1430 ntTSL 3 BASIC26.86■■□□□ 1.89
SOX1O00570 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC26.86■■□□□ 1.89
SOX1O00570 CCDC160-202ENST00000517294 1790 ntAPPRIS P1 TSL 5 BASIC26.86■■□□□ 1.89
SOX1O00570 EMC10-206ENST00000598585 1610 ntAPPRIS ALT2 TSL 5 BASIC26.86■■□□□ 1.89
SOX1O00570 VEGFA-209ENST00000425836 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC26.85■■□□□ 1.89
SOX1O00570 HERC2P9-201ENST00000507787 1023 ntTSL 1 (best) BASIC26.85■■□□□ 1.89
SOX1O00570 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC26.85■■□□□ 1.89
SOX1O00570 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC26.85■■□□□ 1.89
SOX1O00570 SLC16A8-201ENST00000320521 1878 ntAPPRIS P1 TSL 1 (best) BASIC26.85■■□□□ 1.89
SOX1O00570 KDM4C-203ENST00000401787 1406 ntTSL 1 (best) BASIC26.84■■□□□ 1.89
SOX1O00570 HOXB3-210ENST00000489475 1845 ntTSL 2 BASIC26.84■■□□□ 1.89
SOX1O00570 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC26.84■■□□□ 1.89
SOX1O00570 MYDGF-201ENST00000262947 1018 ntAPPRIS P1 TSL 1 (best) BASIC26.84■■□□□ 1.89
SOX1O00570 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC26.84■■□□□ 1.89
SOX1O00570 GNPTG-204ENST00000527137 386 ntTSL 2 BASIC26.84■■□□□ 1.89
SOX1O00570 FXYD7-204ENST00000588265 636 ntTSL 2 BASIC26.84■■□□□ 1.89
SOX1O00570 FTCD-203ENST00000397746 1878 ntAPPRIS P1 TSL 1 (best) BASIC26.84■■□□□ 1.89
SOX1O00570 ARPC2-202ENST00000315717 1505 ntAPPRIS P1 TSL 1 (best) BASIC26.84■■□□□ 1.89
SOX1O00570 SLC25A10-203ENST00000545862 1911 ntTSL 1 (best) BASIC26.82■■□□□ 1.88
SOX1O00570 FGF20-201ENST00000180166 1688 ntAPPRIS P1 TSL 1 (best) BASIC26.82■■□□□ 1.88
SOX1O00570 NIT1-201ENST00000368007 1749 ntTSL 2 BASIC26.82■■□□□ 1.88
SOX1O00570 RASL10A-201ENST00000216101 1490 ntAPPRIS P1 TSL 1 (best) BASIC26.82■■□□□ 1.88
SOX1O00570 CDCA5-202ENST00000404147 1012 ntTSL 2 BASIC26.82■■□□□ 1.88
SOX1O00570 NKX2-5-204ENST00000521848 1027 ntTSL 2 BASIC26.82■■□□□ 1.88
SOX1O00570 LRRC61-202ENST00000359623 1877 ntAPPRIS P1 TSL 2 BASIC26.81■■□□□ 1.88
SOX1O00570 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC26.81■■□□□ 1.88
SOX1O00570 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC26.81■■□□□ 1.88
SOX1O00570 PRELID2-204ENST00000505416 738 ntAPPRIS P2 TSL 3 BASIC26.81■■□□□ 1.88
SOX1O00570 EME2-205ENST00000568449 1234 ntAPPRIS P1 TSL 1 (best) BASIC26.81■■□□□ 1.88
SOX1O00570 MIR5787-201ENST00000611784 55 ntBASIC26.81■■□□□ 1.88
SOX1O00570 HNRNPAB-205ENST00000506259 1674 ntAPPRIS ALT2 TSL 1 (best) BASIC26.81■■□□□ 1.88
SOX1O00570 BARX1-202ENST00000401724 1323 ntTSL 1 (best) BASIC26.81■■□□□ 1.88
SOX1O00570 INPP4A-203ENST00000409463 1565 ntTSL 1 (best) BASIC26.8■■□□□ 1.88
SOX1O00570 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC26.8■■□□□ 1.88
SOX1O00570 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC26.8■■□□□ 1.88
SOX1O00570 TOLLIP-208ENST00000527938 549 ntTSL 4 BASIC26.8■■□□□ 1.88
SOX1O00570 AC133561.4-201ENST00000566112 224 ntBASIC26.8■■□□□ 1.88
SOX1O00570 MORF4L1-203ENST00000426013 1880 ntAPPRIS P1 TSL 1 (best) BASIC26.79■■□□□ 1.88
SOX1O00570 EID2-201ENST00000390658 1629 ntAPPRIS P1 BASIC26.79■■□□□ 1.88
SOX1O00570 AC078883.1-201ENST00000442417 950 ntTSL 3 BASIC26.78■■□□□ 1.88
SOX1O00570 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC26.78■■□□□ 1.88
SOX1O00570 TBX1-201ENST00000329705 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC26.78■■□□□ 1.88
SOX1O00570 MBLAC1-201ENST00000398075 1502 ntAPPRIS P1 TSL 1 (best) BASIC26.78■■□□□ 1.88
SOX1O00570 MLST8-219ENST00000565250 1588 ntAPPRIS P3 TSL 3 BASIC26.78■■□□□ 1.88
SOX1O00570 FMR1-219ENST00000621453 1864 ntTSL 1 (best) BASIC26.78■■□□□ 1.88
SOX1O00570 C11orf63-202ENST00000307257 1964 ntTSL 2 BASIC26.78■■□□□ 1.88
SOX1O00570 AC135279.3-201ENST00000610945 1311 ntBASIC26.77■■□□□ 1.88
SOX1O00570 KLRG2-202ENST00000393039 1148 ntTSL 5 BASIC26.77■■□□□ 1.88
SOX1O00570 MAPK12-201ENST00000215659 1918 ntAPPRIS P1 TSL 1 (best) BASIC26.77■■□□□ 1.88
SOX1O00570 FSD1L-208ENST00000495708 1906 ntTSL 1 (best) BASIC26.77■■□□□ 1.88
SOX1O00570 HES5-201ENST00000378453 1306 ntAPPRIS P1 TSL 1 (best) BASIC26.76■■□□□ 1.87
SOX1O00570 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC26.76■■□□□ 1.87
SOX1O00570 AC087393.1-201ENST00000582896 145 ntBASIC26.76■■□□□ 1.87
SOX1O00570 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC26.75■■□□□ 1.87
SOX1O00570 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC26.75■■□□□ 1.87
SOX1O00570 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC26.75■■□□□ 1.87
SOX1O00570 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC26.75■■□□□ 1.87
SOX1O00570 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC26.74■■□□□ 1.87
SOX1O00570 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC26.74■■□□□ 1.87
SOX1O00570 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC26.74■■□□□ 1.87
SOX1O00570 RMI2-201ENST00000312499 1457 ntAPPRIS P1 TSL 1 (best) BASIC26.74■■□□□ 1.87
SOX1O00570 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC26.73■■□□□ 1.87
SOX1O00570 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC26.73■■□□□ 1.87
SOX1O00570 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC26.71■■□□□ 1.87
SOX1O00570 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC26.71■■□□□ 1.87
SOX1O00570 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC26.71■■□□□ 1.87
SOX1O00570 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC26.71■■□□□ 1.87
Retrieved 100 of 98,524 protein–RNA pairs in 11.8 ms