Protein–RNA interactions for Protein: A8K830

COLCA2, Colorectal cancer-associated protein 2, humanhuman

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA2A8K830 XKR6-201ENST00000297303 1550 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
COLCA2A8K830 PTGES2-202ENST00000338961 2331 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
COLCA2A8K830 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
COLCA2A8K830 FBXO45-201ENST00000311630 5899 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
COLCA2A8K830 GRK2-204ENST00000526285 1458 ntTSL 5 BASIC19.1■□□□□ 0.65
COLCA2A8K830 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
COLCA2A8K830 ARHGEF35-201ENST00000378115 2431 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
COLCA2A8K830 R3HDM4-201ENST00000361574 1815 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
COLCA2A8K830 ZFAND4-205ENST00000374371 2283 ntTSL 5 BASIC19.1■□□□□ 0.65
COLCA2A8K830 GAL3ST1-204ENST00000402369 1712 ntAPPRIS P1 TSL 3 BASIC19.1■□□□□ 0.65
COLCA2A8K830 ECE2-202ENST00000357474 2667 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
COLCA2A8K830 EPB41L4B-202ENST00000374566 5800 ntAPPRIS P4 TSL 1 (best) BASIC19.1■□□□□ 0.65
COLCA2A8K830 RPUSD1-201ENST00000007264 2050 ntAPPRIS P1 TSL 2 BASIC19.1■□□□□ 0.65
COLCA2A8K830 GSX1-201ENST00000302945 1663 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
COLCA2A8K830 SRP68-202ENST00000539137 2386 ntTSL 2 BASIC19.09■□□□□ 0.65
COLCA2A8K830 NUDT18-202ENST00000613958 1754 ntTSL 2 BASIC19.09■□□□□ 0.65
COLCA2A8K830 RBPMS2-201ENST00000300069 2008 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
COLCA2A8K830 G6PD-202ENST00000393562 2631 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.65
COLCA2A8K830 G6PD-211ENST00000621232 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.65
COLCA2A8K830 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC19.08■□□□□ 0.65
COLCA2A8K830 LHX3-201ENST00000371746 2403 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
COLCA2A8K830 AC243773.2-204ENST00000621428 1462 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
COLCA2A8K830 PPP1R26-201ENST00000356818 4932 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
COLCA2A8K830 CCNYL1-203ENST00000392209 1952 ntTSL 2 BASIC19.08■□□□□ 0.64
COLCA2A8K830 C1QL3-201ENST00000298943 2493 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
COLCA2A8K830 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
COLCA2A8K830 ID2-201ENST00000234091 2041 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
COLCA2A8K830 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC19.07■□□□□ 0.64
COLCA2A8K830 GLRB-203ENST00000509282 1757 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
COLCA2A8K830 HADH-203ENST00000505878 1719 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
COLCA2A8K830 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
COLCA2A8K830 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
COLCA2A8K830 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
COLCA2A8K830 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC19.06■□□□□ 0.64
COLCA2A8K830 TBCC-201ENST00000372876 1616 ntAPPRIS P1 BASIC19.06■□□□□ 0.64
COLCA2A8K830 TMSB15B-202ENST00000436583 2186 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
COLCA2A8K830 TMEM64-201ENST00000418210 4663 ntTSL 2 BASIC19.06■□□□□ 0.64
COLCA2A8K830 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
COLCA2A8K830 CCDC151-202ENST00000586836 1867 ntTSL 2 BASIC19.05■□□□□ 0.64
COLCA2A8K830 TMEM102-201ENST00000323206 1973 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
COLCA2A8K830 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC19.05■□□□□ 0.64
COLCA2A8K830 IRX5-201ENST00000320990 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC19.05■□□□□ 0.64
COLCA2A8K830 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC19.04■□□□□ 0.64
COLCA2A8K830 USP48-205ENST00000421625 2818 ntTSL 2 BASIC19.04■□□□□ 0.64
COLCA2A8K830 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
COLCA2A8K830 TNIP2-206ENST00000510267 2006 ntAPPRIS ALT2 TSL 2 BASIC19.04■□□□□ 0.64
COLCA2A8K830 ELOC-206ENST00000520242 1573 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
COLCA2A8K830 TP53I3-201ENST00000238721 1998 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
COLCA2A8K830 EVA1C-201ENST00000300255 1998 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
COLCA2A8K830 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
COLCA2A8K830 CCDC106-202ENST00000586790 2162 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
COLCA2A8K830 FBXO2-201ENST00000354287 1560 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
COLCA2A8K830 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
COLCA2A8K830 NPTXR-202ENST00000640136 1503 ntAPPRIS P2 TSL 1 (best) BASIC19.03■□□□□ 0.64
COLCA2A8K830 SERF1A-202ENST00000354833 1889 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
COLCA2A8K830 SERF1B-201ENST00000380750 1889 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
COLCA2A8K830 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC19.03■□□□□ 0.64
COLCA2A8K830 HNRNPAB-207ENST00000514633 1571 ntAPPRIS ALT2 TSL 5 BASIC19.02■□□□□ 0.64
COLCA2A8K830 DUSP8P5-201ENST00000422884 1815 ntBASIC19.02■□□□□ 0.64
COLCA2A8K830 BIN1-201ENST00000259238 2338 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
COLCA2A8K830 ST8SIA6-201ENST00000377602 2276 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
COLCA2A8K830 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC19.02■□□□□ 0.64
COLCA2A8K830 FUS-202ENST00000380244 1818 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.63
COLCA2A8K830 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC19.02■□□□□ 0.63
COLCA2A8K830 RAD21-AS1-201ENST00000521487 2010 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
COLCA2A8K830 AC097639.1-201ENST00000565519 1891 ntBASIC19.01■□□□□ 0.63
COLCA2A8K830 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
COLCA2A8K830 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
COLCA2A8K830 EFS-203ENST00000429593 2610 ntTSL 2 BASIC19.01■□□□□ 0.63
COLCA2A8K830 HRAS-203ENST00000397596 1100 ntAPPRIS P1 TSL 3 BASIC19.01■□□□□ 0.63
COLCA2A8K830 RBM4B-203ENST00000525754 2339 ntAPPRIS P1 TSL 2 BASIC19.01■□□□□ 0.63
COLCA2A8K830 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
COLCA2A8K830 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
COLCA2A8K830 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
COLCA2A8K830 AC022211.4-201ENST00000625094 2161 ntBASIC19■□□□□ 0.63
COLCA2A8K830 SLC25A24-204ENST00000569674 2357 ntBASIC19■□□□□ 0.63
COLCA2A8K830 C16orf59-202ENST00000483320 1709 ntAPPRIS ALT2 TSL 2 BASIC19■□□□□ 0.63
COLCA2A8K830 C5orf58-204ENST00000521850 2113 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
COLCA2A8K830 MED17-221ENST00000639724 2317 ntTSL 5 BASIC19■□□□□ 0.63
COLCA2A8K830 MVK-208ENST00000539696 608 ntTSL 5 BASIC19■□□□□ 0.63
COLCA2A8K830 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC19■□□□□ 0.63
COLCA2A8K830 AMZ2-202ENST00000359904 2402 ntAPPRIS P1 TSL 2 BASIC18.99■□□□□ 0.63
COLCA2A8K830 AC009690.3-201ENST00000569547 1902 ntAPPRIS P1 TSL 2 BASIC18.99■□□□□ 0.63
COLCA2A8K830 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC18.99■□□□□ 0.63
COLCA2A8K830 ME2-208ENST00000638937 2471 ntTSL 5 BASIC18.99■□□□□ 0.63
COLCA2A8K830 NOP53-201ENST00000246802 1528 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
COLCA2A8K830 CLPTM1-201ENST00000337392 2604 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
COLCA2A8K830 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
COLCA2A8K830 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
COLCA2A8K830 RPUSD1-208ENST00000567114 1835 ntTSL 2 BASIC18.97■□□□□ 0.63
COLCA2A8K830 ECEL1-202ENST00000409941 2322 ntAPPRIS ALT1 TSL 1 (best) BASIC18.97■□□□□ 0.63
COLCA2A8K830 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
COLCA2A8K830 RHBDD2-202ENST00000318622 1878 ntTSL 2 BASIC18.97■□□□□ 0.63
COLCA2A8K830 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC18.97■□□□□ 0.63
COLCA2A8K830 PCYT2-206ENST00000571105 1628 ntTSL 5 BASIC18.97■□□□□ 0.63
COLCA2A8K830 FBXL20-203ENST00000577399 1620 ntTSL 5 BASIC18.97■□□□□ 0.63
COLCA2A8K830 CCDC160-202ENST00000517294 1790 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
COLCA2A8K830 RAP2A-201ENST00000245304 5487 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
COLCA2A8K830 HACD1-202ENST00000361271 2237 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
COLCA2A8K830 TARBP1-201ENST00000040877 5130 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 13.2 ms