Protein–RNA interactions for Protein: A6NLU0

RFPL4A, Ret finger protein-like 4A, humanhuman

Predictions only

Length 287 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFPL4AA6NLU0 GPR25-201ENST00000304244 1224 ntAPPRIS P1 BASIC21.05■□□□□ 0.96
RFPL4AA6NLU0 AURKAIP1-203ENST00000338370 1072 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
RFPL4AA6NLU0 MIR7108-201ENST00000614319 87 ntBASIC21.05■□□□□ 0.96
RFPL4AA6NLU0 RAD21-AS1-201ENST00000521487 2010 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
RFPL4AA6NLU0 NELFB-202ENST00000634710 1887 ntAPPRIS P2 TSL 1 (best) BASIC21.05■□□□□ 0.96
RFPL4AA6NLU0 NTN3-201ENST00000293973 1986 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
RFPL4AA6NLU0 ATP8B2-201ENST00000368487 1523 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
RFPL4AA6NLU0 QKI-207ENST00000453779 5685 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
RFPL4AA6NLU0 GADD45G-201ENST00000252506 1065 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
RFPL4AA6NLU0 NXNL1-201ENST00000301944 946 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
RFPL4AA6NLU0 CTXN1-201ENST00000318978 1274 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
RFPL4AA6NLU0 NSMCE4A-201ENST00000369017 1224 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
RFPL4AA6NLU0 MXRA7-202ENST00000375036 1950 ntAPPRIS ALT2 TSL 2 BASIC21.04■□□□□ 0.96
RFPL4AA6NLU0 CYS1-201ENST00000381813 2738 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
RFPL4AA6NLU0 IGFBPL1-201ENST00000377694 1093 ntAPPRIS P1 TSL 2 BASIC21.03■□□□□ 0.96
RFPL4AA6NLU0 AC187653.1-201ENST00000506382 702 ntAPPRIS P1 TSL 5 BASIC21.03■□□□□ 0.96
RFPL4AA6NLU0 CR559946.2-201ENST00000623684 991 ntBASIC21.03■□□□□ 0.96
RFPL4AA6NLU0 MYPOP-201ENST00000322217 1890 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
RFPL4AA6NLU0 HNRNPL-201ENST00000221419 2471 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
RFPL4AA6NLU0 APLP1-201ENST00000221891 2495 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
RFPL4AA6NLU0 LYPD6B-203ENST00000409642 1577 ntAPPRIS P3 TSL 1 (best) BASIC21.02■□□□□ 0.96
RFPL4AA6NLU0 AL121987.2-201ENST00000418602 1578 ntTSL 2 BASIC21.02■□□□□ 0.96
RFPL4AA6NLU0 EZH2-208ENST00000483967 2466 ntAPPRIS ALT1 TSL 2 BASIC21.02■□□□□ 0.96
RFPL4AA6NLU0 KAT8-206ENST00000543774 1846 ntAPPRIS P1 TSL 5 BASIC21.02■□□□□ 0.96
RFPL4AA6NLU0 GDF1-201ENST00000247005 2517 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
RFPL4AA6NLU0 CERS1-204ENST00000623882 2517 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
RFPL4AA6NLU0 CCDC136-206ENST00000464832 1720 ntAPPRIS ALT2 TSL 5 BASIC21.02■□□□□ 0.96
RFPL4AA6NLU0 KCNMA1-283ENST00000640523 5425 ntAPPRIS ALT2 TSL 5 BASIC21.02■□□□□ 0.96
RFPL4AA6NLU0 UNCX-201ENST00000316333 2048 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
RFPL4AA6NLU0 HAS1-205ENST00000601714 2086 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
RFPL4AA6NLU0 PCSK6-218ENST00000619160 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
RFPL4AA6NLU0 RTN2-208ENST00000590526 2357 ntTSL 5 BASIC21.01■□□□□ 0.95
RFPL4AA6NLU0 PCYT2-202ENST00000538721 1765 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
RFPL4AA6NLU0 TMEM185A-208ENST00000611119 2662 ntTSL 2 BASIC21.01■□□□□ 0.95
RFPL4AA6NLU0 MIR3648-2-201ENST00000581792 180 ntBASIC21.01■□□□□ 0.95
RFPL4AA6NLU0 MIR3648-1-201ENST00000615959 180 ntBASIC21.01■□□□□ 0.95
RFPL4AA6NLU0 GDI1-215ENST00000630693 786 ntTSL 4 BASIC21.01■□□□□ 0.95
RFPL4AA6NLU0 C14orf80-205ENST00000392523 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
RFPL4AA6NLU0 FOXA2-201ENST00000377115 2401 ntAPPRIS P3 TSL 1 (best) BASIC21■□□□□ 0.95
RFPL4AA6NLU0 TSEN34-204ENST00000429671 1912 ntTSL 2 BASIC21■□□□□ 0.95
RFPL4AA6NLU0 BBC3-204ENST00000449228 1827 ntTSL 1 (best) BASIC21■□□□□ 0.95
RFPL4AA6NLU0 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC21■□□□□ 0.95
RFPL4AA6NLU0 AC008813.1-201ENST00000536597 885 ntBASIC21■□□□□ 0.95
RFPL4AA6NLU0 AARD-201ENST00000378279 2299 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
RFPL4AA6NLU0 C8orf58-202ENST00000409586 2021 ntAPPRIS ALT2 TSL 2 BASIC20.99■□□□□ 0.95
RFPL4AA6NLU0 UBE2J2-202ENST00000349431 1733 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
RFPL4AA6NLU0 MACF1-219ENST00000484793 834 ntTSL 2 BASIC20.99■□□□□ 0.95
RFPL4AA6NLU0 SYT7-203ENST00000539008 2061 ntTSL 5 BASIC20.99■□□□□ 0.95
RFPL4AA6NLU0 GATA4-209ENST00000622443 1982 ntTSL 5 BASIC20.99■□□□□ 0.95
RFPL4AA6NLU0 HABP4-202ENST00000375251 2304 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
RFPL4AA6NLU0 PRR5-ARHGAP8-202ENST00000361473 2013 ntTSL 5 BASIC20.99■□□□□ 0.95
RFPL4AA6NLU0 AC009690.3-201ENST00000569547 1902 ntAPPRIS P1 TSL 2 BASIC20.98■□□□□ 0.95
RFPL4AA6NLU0 AC006455.5-202ENST00000615248 2284 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
RFPL4AA6NLU0 GSR-205ENST00000541648 1410 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
RFPL4AA6NLU0 NRG1-210ENST00000520407 1955 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
RFPL4AA6NLU0 DYRK1B-201ENST00000323039 2535 ntAPPRIS P3 TSL 1 (best) BASIC20.98■□□□□ 0.95
RFPL4AA6NLU0 LAGE3-201ENST00000357360 949 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
RFPL4AA6NLU0 SURF1-201ENST00000371974 1093 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
RFPL4AA6NLU0 SURF1-205ENST00000615505 991 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
RFPL4AA6NLU0 AC092902.2-221ENST00000628476 965 ntTSL 5 BASIC20.98■□□□□ 0.95
RFPL4AA6NLU0 ARL2-SNX15-201ENST00000301886 2392 ntAPPRIS P1 TSL 2 BASIC20.98■□□□□ 0.95
RFPL4AA6NLU0 BTBD2-201ENST00000255608 2649 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
RFPL4AA6NLU0 EPB41L4B-202ENST00000374566 5800 ntAPPRIS P4 TSL 1 (best) BASIC20.98■□□□□ 0.95
RFPL4AA6NLU0 RP9-201ENST00000297157 1121 ntAPPRIS P2 TSL 1 (best) BASIC20.97■□□□□ 0.95
RFPL4AA6NLU0 PVT1-219ENST00000523427 938 ntTSL 3 BASIC20.97■□□□□ 0.95
RFPL4AA6NLU0 AC016575.1-201ENST00000607026 382 ntBASIC20.97■□□□□ 0.95
RFPL4AA6NLU0 G6PC3-201ENST00000269097 1533 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
RFPL4AA6NLU0 POLR3H-201ENST00000337566 1330 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
RFPL4AA6NLU0 ANKRD53-203ENST00000441349 1797 ntTSL 5 BASIC20.97■□□□□ 0.95
RFPL4AA6NLU0 PABPN1-202ENST00000397276 2768 ntAPPRIS ALT1 TSL 1 (best) BASIC20.96■□□□□ 0.95
RFPL4AA6NLU0 NECTIN2-202ENST00000252485 2112 ntAPPRIS P3 TSL 1 (best) BASIC20.96■□□□□ 0.95
RFPL4AA6NLU0 IRX4-202ENST00000505790 2538 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
RFPL4AA6NLU0 NFKBIE-201ENST00000275015 2581 ntTSL 1 (best) BASIC20.95■□□□□ 0.95
RFPL4AA6NLU0 EMID1-202ENST00000404755 2049 ntTSL 5 BASIC20.95■□□□□ 0.94
RFPL4AA6NLU0 TADA2B-201ENST00000310074 4350 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
RFPL4AA6NLU0 RARA-203ENST00000394086 2008 ntTSL 2 BASIC20.95■□□□□ 0.94
RFPL4AA6NLU0 USP25-203ENST00000351097 2158 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
RFPL4AA6NLU0 SPATA33-209ENST00000579310 1490 ntAPPRIS ALT2 TSL 2 BASIC20.94■□□□□ 0.94
RFPL4AA6NLU0 DLG3-203ENST00000374360 5905 ntAPPRIS P2 TSL 1 (best) BASIC20.94■□□□□ 0.94
RFPL4AA6NLU0 RARA-202ENST00000394081 2285 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
RFPL4AA6NLU0 C9orf50-201ENST00000372478 1620 ntAPPRIS P2 TSL 2 BASIC20.94■□□□□ 0.94
RFPL4AA6NLU0 CDK9-201ENST00000373264 2463 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
RFPL4AA6NLU0 GBX2-201ENST00000306318 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
RFPL4AA6NLU0 PWWP2B-201ENST00000305233 2651 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
RFPL4AA6NLU0 CTBP2-211ENST00000494626 2014 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
RFPL4AA6NLU0 LACTBL1-202ENST00000618559 1500 ntAPPRIS ALT2 TSL 5 BASIC20.94■□□□□ 0.94
RFPL4AA6NLU0 DLX2-202ENST00000466293 1852 ntTSL 2 BASIC20.93■□□□□ 0.94
RFPL4AA6NLU0 SAE1-209ENST00000598840 1831 ntTSL 5 BASIC20.92■□□□□ 0.94
RFPL4AA6NLU0 TRIM54-201ENST00000296098 2027 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
RFPL4AA6NLU0 HLA-V-202ENST00000446817 847 ntBASIC20.92■□□□□ 0.94
RFPL4AA6NLU0 LINC01896-206ENST00000575722 1256 ntTSL 2 BASIC20.92■□□□□ 0.94
RFPL4AA6NLU0 KRT18-201ENST00000388835 1562 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
RFPL4AA6NLU0 RFFL-206ENST00000447669 2030 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
RFPL4AA6NLU0 DVL1-201ENST00000378888 3239 ntAPPRIS ALT1 TSL 5 BASIC20.91■□□□□ 0.94
RFPL4AA6NLU0 CPLX1-201ENST00000304062 2181 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
RFPL4AA6NLU0 SPIRE2-205ENST00000563972 1823 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
RFPL4AA6NLU0 DHFR-203ENST00000505337 1719 ntAPPRIS P1 TSL 2 BASIC20.9■□□□□ 0.94
RFPL4AA6NLU0 MIR219A2-201ENST00000608502 1504 ntBASIC20.9■□□□□ 0.94
RFPL4AA6NLU0 CAPNS1-215ENST00000628018 1509 ntAPPRIS ALT2 TSL 5 BASIC20.9■□□□□ 0.94
RFPL4AA6NLU0 CDPF1-201ENST00000314567 1875 ntAPPRIS P2 TSL 1 (best) BASIC20.9■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 21.6 ms