Protein–RNA interactions for Protein: A6NFN3

RBFOX3, RNA binding protein fox-1 homolog 3, humanhuman

Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX3A6NFN3 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
RBFOX3A6NFN3 VPS53-211ENST00000571805 2356 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
RBFOX3A6NFN3 WIPI2-204ENST00000404704 1663 ntTSL 5 BASIC19.34■□□□□ 0.69
RBFOX3A6NFN3 BATF3-201ENST00000243440 980 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
RBFOX3A6NFN3 ACTR1B-201ENST00000289228 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
RBFOX3A6NFN3 UNC50-204ENST00000409975 2172 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
RBFOX3A6NFN3 PDPK1-204ENST00000441549 1729 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
RBFOX3A6NFN3 BIN1-206ENST00000352848 2209 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
RBFOX3A6NFN3 CDYL-203ENST00000397588 2184 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
RBFOX3A6NFN3 BTBD7-205ENST00000554565 2697 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
RBFOX3A6NFN3 YRDC-201ENST00000373044 1826 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
RBFOX3A6NFN3 MAL2-204ENST00000614891 2818 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
RBFOX3A6NFN3 MAF-203ENST00000569649 1217 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.68
RBFOX3A6NFN3 CASK-201ENST00000378154 2494 ntTSL 5 BASIC19.33■□□□□ 0.68
RBFOX3A6NFN3 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
RBFOX3A6NFN3 LHX3-201ENST00000371746 2403 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
RBFOX3A6NFN3 TTLL11-202ENST00000373776 2012 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
RBFOX3A6NFN3 RIMKLB-205ENST00000535829 2236 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
RBFOX3A6NFN3 ARHGEF35-201ENST00000378115 2431 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
RBFOX3A6NFN3 AC138932.3-201ENST00000567634 1902 ntBASIC19.32■□□□□ 0.68
RBFOX3A6NFN3 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
RBFOX3A6NFN3 COQ2-202ENST00000311469 1641 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
RBFOX3A6NFN3 SNX10-207ENST00000446848 2613 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
RBFOX3A6NFN3 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
RBFOX3A6NFN3 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
RBFOX3A6NFN3 RPUSD1-208ENST00000567114 1835 ntTSL 2 BASIC19.31■□□□□ 0.68
RBFOX3A6NFN3 SLC35D2-201ENST00000253270 1613 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
RBFOX3A6NFN3 SAMD4B-208ENST00000598913 2877 ntAPPRIS ALT1 TSL 1 (best) BASIC19.31■□□□□ 0.68
RBFOX3A6NFN3 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
RBFOX3A6NFN3 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
RBFOX3A6NFN3 MAGI2-217ENST00000629359 6704 ntTSL 5 BASIC19.3■□□□□ 0.68
RBFOX3A6NFN3 KCTD5-201ENST00000301738 2482 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
RBFOX3A6NFN3 F8A1-201ENST00000610495 1713 ntAPPRIS P1 BASIC19.3■□□□□ 0.68
RBFOX3A6NFN3 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC19.3■□□□□ 0.68
RBFOX3A6NFN3 BIN1-211ENST00000409400 2143 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
RBFOX3A6NFN3 TMEM256-PLSCR3-204ENST00000573331 2557 ntAPPRIS P5 TSL 2 BASIC19.29■□□□□ 0.68
RBFOX3A6NFN3 MSX2-202ENST00000507785 1188 ntTSL 2 BASIC19.29■□□□□ 0.68
RBFOX3A6NFN3 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
RBFOX3A6NFN3 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
RBFOX3A6NFN3 RNF175-201ENST00000347063 1604 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
RBFOX3A6NFN3 PEX5-205ENST00000420616 2477 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
RBFOX3A6NFN3 AC022211.4-201ENST00000625094 2161 ntBASIC19.28■□□□□ 0.68
RBFOX3A6NFN3 AC027237.3-202ENST00000558617 1778 ntTSL 2 BASIC19.28■□□□□ 0.68
RBFOX3A6NFN3 TTC3-225ENST00000540756 2025 ntTSL 2 BASIC19.28■□□□□ 0.68
RBFOX3A6NFN3 HADH-203ENST00000505878 1719 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
RBFOX3A6NFN3 STUB1-201ENST00000219548 1472 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
RBFOX3A6NFN3 HAS2-AS1-201ENST00000514180 1656 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
RBFOX3A6NFN3 CLDN5-201ENST00000403084 2357 ntBASIC19.27■□□□□ 0.68
RBFOX3A6NFN3 CTF1-202ENST00000395019 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC19.27■□□□□ 0.68
RBFOX3A6NFN3 SAP30-201ENST00000296504 1108 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
RBFOX3A6NFN3 NPC2-207ENST00000555619 1035 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.68
RBFOX3A6NFN3 C18orf65-201ENST00000622985 2076 ntTSL 2 BASIC19.27■□□□□ 0.68
RBFOX3A6NFN3 RCC2-201ENST00000375433 2030 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
RBFOX3A6NFN3 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC19.26■□□□□ 0.67
RBFOX3A6NFN3 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
RBFOX3A6NFN3 CAPNS1-215ENST00000628018 1509 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
RBFOX3A6NFN3 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC19.25■□□□□ 0.67
RBFOX3A6NFN3 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
RBFOX3A6NFN3 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
RBFOX3A6NFN3 HORMAD2-201ENST00000336726 2187 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
RBFOX3A6NFN3 TXNRD2-205ENST00000400525 1874 ntTSL 5 BASIC19.25■□□□□ 0.67
RBFOX3A6NFN3 CCDC151-202ENST00000586836 1867 ntTSL 2 BASIC19.25■□□□□ 0.67
RBFOX3A6NFN3 SSBP4-201ENST00000270061 1768 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
RBFOX3A6NFN3 SPOCK3-221ENST00000512648 1456 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
RBFOX3A6NFN3 NKX1-1-201ENST00000422806 1236 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
RBFOX3A6NFN3 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC19.25■□□□□ 0.67
RBFOX3A6NFN3 EMID1-202ENST00000404755 2049 ntTSL 5 BASIC19.25■□□□□ 0.67
RBFOX3A6NFN3 GET4-201ENST00000265857 2090 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
RBFOX3A6NFN3 NUDT18-202ENST00000613958 1754 ntTSL 2 BASIC19.24■□□□□ 0.67
RBFOX3A6NFN3 TNIP2-206ENST00000510267 2006 ntAPPRIS ALT2 TSL 2 BASIC19.24■□□□□ 0.67
RBFOX3A6NFN3 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC19.24■□□□□ 0.67
RBFOX3A6NFN3 SETBP1-202ENST00000426838 1785 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
RBFOX3A6NFN3 NELFB-202ENST00000634710 1887 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
RBFOX3A6NFN3 LY6K-203ENST00000519387 963 ntAPPRIS ALT2 TSL 2 BASIC19.23■□□□□ 0.67
RBFOX3A6NFN3 MAZ-205ENST00000562337 1574 ntTSL 3 BASIC19.23■□□□□ 0.67
RBFOX3A6NFN3 MYBL1-204ENST00000522677 5192 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
RBFOX3A6NFN3 QDPR-201ENST00000281243 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
RBFOX3A6NFN3 ZNF837-201ENST00000427624 2038 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
RBFOX3A6NFN3 TSGA13-204ENST00000456951 2046 ntAPPRIS P2 TSL 2 BASIC19.22■□□□□ 0.67
RBFOX3A6NFN3 ZNF76-203ENST00000373953 2716 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
RBFOX3A6NFN3 AL031258.1-201ENST00000623562 325 ntBASIC19.22■□□□□ 0.67
RBFOX3A6NFN3 TSPAN10-203ENST00000574882 1837 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
RBFOX3A6NFN3 MKRN1-202ENST00000443720 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
RBFOX3A6NFN3 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
RBFOX3A6NFN3 GTF2E2-201ENST00000355904 1762 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
RBFOX3A6NFN3 SIAH2-201ENST00000312960 2517 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
RBFOX3A6NFN3 AGTR1-203ENST00000404754 2252 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
RBFOX3A6NFN3 ARTN-201ENST00000372354 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
RBFOX3A6NFN3 CPNE2-202ENST00000535318 2316 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
RBFOX3A6NFN3 CCDC96-201ENST00000310085 2091 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
RBFOX3A6NFN3 NRBF2-202ENST00000435510 1816 ntTSL 2 BASIC19.21■□□□□ 0.67
RBFOX3A6NFN3 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.66
RBFOX3A6NFN3 GDI1-204ENST00000447750 2474 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
RBFOX3A6NFN3 ID2-201ENST00000234091 2041 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
RBFOX3A6NFN3 CCSER2-202ENST00000359979 2066 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
RBFOX3A6NFN3 MRGBP-201ENST00000370487 2781 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
RBFOX3A6NFN3 RYK-209ENST00000623711 2934 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
RBFOX3A6NFN3 HOXA10-201ENST00000283921 2541 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
RBFOX3A6NFN3 AC010501.1-201ENST00000606270 1962 ntBASIC19.19■□□□□ 0.66
RBFOX3A6NFN3 FUS-202ENST00000380244 1818 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 26.4 ms