Protein–RNA interactions for Protein: A0A0K0K1A5

TRBV6-5, T-cell receptor beta variable 6-5 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV6-5A0A0K0K1A5 CYS1-201ENST00000381813 2738 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
TRBV6-5A0A0K0K1A5 HOMER3-202ENST00000392351 1557 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
TRBV6-5A0A0K0K1A5 GATA2-AS1-202ENST00000468377 1578 ntTSL 2 BASIC17.37■□□□□ 0.37
TRBV6-5A0A0K0K1A5 C8orf58-201ENST00000289989 2016 ntAPPRIS P3 TSL 5 BASIC17.37■□□□□ 0.37
TRBV6-5A0A0K0K1A5 TWF2-201ENST00000305533 1718 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
TRBV6-5A0A0K0K1A5 ABHD12-202ENST00000376542 1725 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
TRBV6-5A0A0K0K1A5 VSTM2L-202ENST00000373461 1959 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
TRBV6-5A0A0K0K1A5 PRR35-201ENST00000409413 2216 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
TRBV6-5A0A0K0K1A5 HAS2-AS1-201ENST00000514180 1656 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
TRBV6-5A0A0K0K1A5 RILPL1-205ENST00000636882 2258 ntTSL 5 BASIC17.36■□□□□ 0.37
TRBV6-5A0A0K0K1A5 ITM2C-203ENST00000335005 1889 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
TRBV6-5A0A0K0K1A5 UBALD2-203ENST00000589240 660 ntTSL 2 BASIC17.36■□□□□ 0.37
TRBV6-5A0A0K0K1A5 AL121987.2-201ENST00000418602 1578 ntTSL 2 BASIC17.36■□□□□ 0.37
TRBV6-5A0A0K0K1A5 H2AFV-204ENST00000350771 687 ntTSL 2 BASIC17.35■□□□□ 0.37
TRBV6-5A0A0K0K1A5 DUX4L28-201ENST00000623687 678 ntBASIC17.35■□□□□ 0.37
TRBV6-5A0A0K0K1A5 SLC25A10-202ENST00000350690 1885 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
TRBV6-5A0A0K0K1A5 ZC3H14-202ENST00000302216 2560 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
TRBV6-5A0A0K0K1A5 SLC35D2-203ENST00000375259 1361 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
TRBV6-5A0A0K0K1A5 PDK1-202ENST00000392571 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
TRBV6-5A0A0K0K1A5 KHSRP-201ENST00000398148 2993 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
TRBV6-5A0A0K0K1A5 FAM185A-202ENST00000413034 1179 ntAPPRIS P4 TSL 5 BASIC17.34■□□□□ 0.37
TRBV6-5A0A0K0K1A5 ZNF747-203ENST00000568028 1511 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
TRBV6-5A0A0K0K1A5 AFDN-201ENST00000344191 5249 ntTSL 5 BASIC17.34■□□□□ 0.37
TRBV6-5A0A0K0K1A5 NDEL1-201ENST00000334527 2372 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
TRBV6-5A0A0K0K1A5 ATP5G2-201ENST00000338662 1792 ntTSL 2 BASIC17.33■□□□□ 0.37
TRBV6-5A0A0K0K1A5 ZSWIM6-201ENST00000252744 5501 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
TRBV6-5A0A0K0K1A5 MARCH2-202ENST00000381035 1192 ntTSL 5 BASIC17.33■□□□□ 0.36
TRBV6-5A0A0K0K1A5 LYNX1-208ENST00000615007 1293 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
TRBV6-5A0A0K0K1A5 P2RX4-203ENST00000359949 1836 ntTSL 5 BASIC17.33■□□□□ 0.36
TRBV6-5A0A0K0K1A5 C1QTNF1-206ENST00000579760 1672 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
TRBV6-5A0A0K0K1A5 AGBL5-201ENST00000323064 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
TRBV6-5A0A0K0K1A5 FUT11-202ENST00000394790 2175 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
TRBV6-5A0A0K0K1A5 HOPX-206ENST00000503639 1248 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
TRBV6-5A0A0K0K1A5 ZNF821-201ENST00000313565 1874 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
TRBV6-5A0A0K0K1A5 MED17-227ENST00000640521 2047 ntTSL 5 BASIC17.31■□□□□ 0.36
TRBV6-5A0A0K0K1A5 SRPK3-205ENST00000393786 1900 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
TRBV6-5A0A0K0K1A5 ARRB2-210ENST00000572457 1660 ntTSL 5 BASIC17.31■□□□□ 0.36
TRBV6-5A0A0K0K1A5 EPB41L4B-202ENST00000374566 5800 ntAPPRIS P4 TSL 1 (best) BASIC17.31■□□□□ 0.36
TRBV6-5A0A0K0K1A5 AL357033.1-201ENST00000370520 1933 ntTSL 2 BASIC17.31■□□□□ 0.36
TRBV6-5A0A0K0K1A5 FKBP8-213ENST00000608443 1849 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
TRBV6-5A0A0K0K1A5 BTBD2-201ENST00000255608 2649 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
TRBV6-5A0A0K0K1A5 NPAS3-206ENST00000548645 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
TRBV6-5A0A0K0K1A5 VAX2-201ENST00000234392 1147 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
TRBV6-5A0A0K0K1A5 MSANTD2-203ENST00000524950 1109 ntTSL 2 BASIC17.3■□□□□ 0.36
TRBV6-5A0A0K0K1A5 CIB2-204ENST00000557846 934 ntTSL 3 BASIC17.3■□□□□ 0.36
TRBV6-5A0A0K0K1A5 MIR3665-201ENST00000578708 105 ntBASIC17.3■□□□□ 0.36
TRBV6-5A0A0K0K1A5 R3HDM4-203ENST00000587975 1765 ntTSL 3 BASIC17.3■□□□□ 0.36
TRBV6-5A0A0K0K1A5 RARA-203ENST00000394086 2008 ntTSL 2 BASIC17.3■□□□□ 0.36
TRBV6-5A0A0K0K1A5 PURG-202ENST00000475541 2875 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
TRBV6-5A0A0K0K1A5 PHF23-212ENST00000576955 1944 ntTSL 2 BASIC17.29■□□□□ 0.36
TRBV6-5A0A0K0K1A5 AMH-201ENST00000221496 1821 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
TRBV6-5A0A0K0K1A5 U2AF1-203ENST00000398137 1019 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
TRBV6-5A0A0K0K1A5 U2AF1L5-212ENST00000639996 1019 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
TRBV6-5A0A0K0K1A5 ZDHHC16-201ENST00000345745 1519 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
TRBV6-5A0A0K0K1A5 ADAMTSL5-202ENST00000395467 1533 ntTSL 5 BASIC17.29■□□□□ 0.36
TRBV6-5A0A0K0K1A5 THRA-202ENST00000394121 2260 ntTSL 2 BASIC17.29■□□□□ 0.36
TRBV6-5A0A0K0K1A5 ZNF598-202ENST00000562103 2717 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
TRBV6-5A0A0K0K1A5 CCDC106-202ENST00000586790 2162 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
TRBV6-5A0A0K0K1A5 FAM124A-204ENST00000615498 2383 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
TRBV6-5A0A0K0K1A5 PORCN-203ENST00000359882 1877 ntAPPRIS ALT1 TSL 5 BASIC17.29■□□□□ 0.36
TRBV6-5A0A0K0K1A5 ARPC2-201ENST00000295685 1605 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
TRBV6-5A0A0K0K1A5 FOXF2-201ENST00000259806 2187 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
TRBV6-5A0A0K0K1A5 ID4-201ENST00000378700 2344 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
TRBV6-5A0A0K0K1A5 IFFO2-203ENST00000455833 6188 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
TRBV6-5A0A0K0K1A5 MAZ-201ENST00000219782 2698 ntAPPRIS P4 TSL 1 (best) BASIC17.28■□□□□ 0.36
TRBV6-5A0A0K0K1A5 NECAB2-201ENST00000305202 1608 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
TRBV6-5A0A0K0K1A5 FKBP1A-204ENST00000400137 1622 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
TRBV6-5A0A0K0K1A5 KRT72-202ENST00000354310 1764 ntTSL 2 BASIC17.28■□□□□ 0.36
TRBV6-5A0A0K0K1A5 PTH1R-201ENST00000313049 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
TRBV6-5A0A0K0K1A5 MXD3-201ENST00000423571 1534 ntTSL 2 BASIC17.27■□□□□ 0.36
TRBV6-5A0A0K0K1A5 MAD2L2-207ENST00000376692 1118 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
TRBV6-5A0A0K0K1A5 RPS2-210ENST00000530225 765 ntTSL 2 BASIC17.27■□□□□ 0.36
TRBV6-5A0A0K0K1A5 AC022211.4-201ENST00000625094 2161 ntBASIC17.27■□□□□ 0.36
TRBV6-5A0A0K0K1A5 ANKRD9-205ENST00000560748 1413 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.35
TRBV6-5A0A0K0K1A5 PTPN2-202ENST00000327283 1706 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
TRBV6-5A0A0K0K1A5 SCTR-201ENST00000019103 1865 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
TRBV6-5A0A0K0K1A5 AL139125.2-201ENST00000623134 1869 ntBASIC17.27■□□□□ 0.35
TRBV6-5A0A0K0K1A5 APBA3-201ENST00000316757 2075 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
TRBV6-5A0A0K0K1A5 CDKN2A-201ENST00000304494 1218 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
TRBV6-5A0A0K0K1A5 DNLZ-201ENST00000371738 724 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
TRBV6-5A0A0K0K1A5 ARTN-204ENST00000438616 889 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
TRBV6-5A0A0K0K1A5 CAMK1D-203ENST00000615792 1725 ntTSL 5 BASIC17.26■□□□□ 0.35
TRBV6-5A0A0K0K1A5 ZNF365-206ENST00000395255 1674 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
TRBV6-5A0A0K0K1A5 LHX3-201ENST00000371746 2403 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
TRBV6-5A0A0K0K1A5 SLC9A3-201ENST00000264938 2584 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
TRBV6-5A0A0K0K1A5 KRT72-201ENST00000293745 2015 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
TRBV6-5A0A0K0K1A5 YWHAH-202ENST00000397492 1879 ntTSL 3 BASIC17.25■□□□□ 0.35
TRBV6-5A0A0K0K1A5 GBX2-201ENST00000306318 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
TRBV6-5A0A0K0K1A5 VEGFA-226ENST00000611736 1239 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
TRBV6-5A0A0K0K1A5 EPM2A-208ENST00000618445 1694 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
TRBV6-5A0A0K0K1A5 KCNMA1-283ENST00000640523 5425 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
TRBV6-5A0A0K0K1A5 TBX1-201ENST00000329705 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
TRBV6-5A0A0K0K1A5 TARBP1-201ENST00000040877 5130 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
TRBV6-5A0A0K0K1A5 CABP1-202ENST00000316803 1658 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
TRBV6-5A0A0K0K1A5 PREB-202ENST00000406567 1910 ntTSL 5 BASIC17.24■□□□□ 0.35
TRBV6-5A0A0K0K1A5 AC138932.3-201ENST00000567634 1902 ntBASIC17.24■□□□□ 0.35
TRBV6-5A0A0K0K1A5 MROH6-211ENST00000534459 1789 ntAPPRIS ALT2 TSL 2 BASIC17.24■□□□□ 0.35
TRBV6-5A0A0K0K1A5 C12orf75-201ENST00000443585 1366 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
TRBV6-5A0A0K0K1A5 BIN1-206ENST00000352848 2209 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
TRBV6-5A0A0K0K1A5 PCOLCE2-201ENST00000295992 2021 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 30.3 ms