Protein–RNA interactions for Protein: A0A0B4J279

TRAV21, T-cell receptor alpha variable 21 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV21A0A0B4J279 KAZN-207ENST00000503743 1475 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
TRAV21A0A0B4J279 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
TRAV21A0A0B4J279 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
TRAV21A0A0B4J279 U2AF1-204ENST00000459639 1675 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
TRAV21A0A0B4J279 U2AF1L5-204ENST00000623375 1675 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
TRAV21A0A0B4J279 BTBD6-203ENST00000392554 2176 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
TRAV21A0A0B4J279 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC18.13■□□□□ 0.49
TRAV21A0A0B4J279 SNX5-201ENST00000377759 2270 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
TRAV21A0A0B4J279 AC231981.1-201ENST00000450917 974 ntTSL 3 BASIC18.13■□□□□ 0.49
TRAV21A0A0B4J279 AC009097.4-201ENST00000566738 777 ntTSL 2 BASIC18.13■□□□□ 0.49
TRAV21A0A0B4J279 TSPOAP1-AS1-205ENST00000580022 2337 ntTSL 2 BASIC18.13■□□□□ 0.49
TRAV21A0A0B4J279 GATA2-AS1-202ENST00000468377 1578 ntTSL 2 BASIC18.13■□□□□ 0.49
TRAV21A0A0B4J279 FBXL20-203ENST00000577399 1620 ntTSL 5 BASIC18.12■□□□□ 0.49
TRAV21A0A0B4J279 NRM-201ENST00000259953 1755 ntAPPRIS P2 TSL 2 BASIC18.12■□□□□ 0.49
TRAV21A0A0B4J279 MAD2L2-201ENST00000235310 1860 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
TRAV21A0A0B4J279 KREMEN2-205ENST00000575769 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
TRAV21A0A0B4J279 TRIM54-201ENST00000296098 2027 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
TRAV21A0A0B4J279 MYH7B-209ENST00000618182 6197 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
TRAV21A0A0B4J279 AC004080.1-201ENST00000523608 757 ntTSL 2 BASIC18.12■□□□□ 0.49
TRAV21A0A0B4J279 KLC1-203ENST00000347839 2271 ntTSL 5 BASIC18.12■□□□□ 0.49
TRAV21A0A0B4J279 CASP9-202ENST00000348549 1621 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
TRAV21A0A0B4J279 TMEM55B-202ENST00000398020 1696 ntAPPRIS ALT1 TSL 1 (best) BASIC18.12■□□□□ 0.49
TRAV21A0A0B4J279 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
TRAV21A0A0B4J279 RINL-208ENST00000598904 1846 ntAPPRIS P3 TSL 5 BASIC18.11■□□□□ 0.49
TRAV21A0A0B4J279 CEBPB-201ENST00000303004 1956 ntAPPRIS P1 BASIC18.1■□□□□ 0.49
TRAV21A0A0B4J279 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
TRAV21A0A0B4J279 PORCN-202ENST00000355961 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC18.09■□□□□ 0.49
TRAV21A0A0B4J279 ARPC2-201ENST00000295685 1605 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
TRAV21A0A0B4J279 GDF1-201ENST00000247005 2517 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
TRAV21A0A0B4J279 CERS1-204ENST00000623882 2517 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
TRAV21A0A0B4J279 HABP4-202ENST00000375251 2304 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
TRAV21A0A0B4J279 PICALM-224ENST00000630913 2261 ntTSL 5 BASIC18.09■□□□□ 0.49
TRAV21A0A0B4J279 RFWD2-201ENST00000308769 2124 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
TRAV21A0A0B4J279 C11orf95-204ENST00000546282 390 ntTSL 3 BASIC18.09■□□□□ 0.49
TRAV21A0A0B4J279 CAPNS1-217ENST00000629983 799 ntTSL 5 BASIC18.09■□□□□ 0.49
TRAV21A0A0B4J279 PDK1-202ENST00000392571 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.49
TRAV21A0A0B4J279 ADAMTSL5-202ENST00000395467 1533 ntTSL 5 BASIC18.08■□□□□ 0.49
TRAV21A0A0B4J279 ST7L-206ENST00000369666 1815 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
TRAV21A0A0B4J279 COPRS-202ENST00000378634 1041 ntTSL 2 BASIC18.08■□□□□ 0.48
TRAV21A0A0B4J279 FKBP1A-204ENST00000400137 1622 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
TRAV21A0A0B4J279 ARPC2-202ENST00000315717 1505 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
TRAV21A0A0B4J279 ZDHHC16-206ENST00000370854 1798 ntAPPRIS P4 TSL 1 (best) BASIC18.07■□□□□ 0.48
TRAV21A0A0B4J279 PCSK6-216ENST00000615296 2921 ntTSL 5 BASIC18.07■□□□□ 0.48
TRAV21A0A0B4J279 TSGA13-204ENST00000456951 2046 ntAPPRIS P2 TSL 2 BASIC18.07■□□□□ 0.48
TRAV21A0A0B4J279 YRDC-201ENST00000373044 1826 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
TRAV21A0A0B4J279 TBX1-201ENST00000329705 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
TRAV21A0A0B4J279 FBXL6-201ENST00000331890 1785 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
TRAV21A0A0B4J279 GCLC-209ENST00000514004 2356 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
TRAV21A0A0B4J279 HOXA4-204ENST00000610970 1728 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
TRAV21A0A0B4J279 VSTM2L-202ENST00000373461 1959 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
TRAV21A0A0B4J279 MEIS2-204ENST00000397620 2295 ntTSL 2 BASIC18.06■□□□□ 0.48
TRAV21A0A0B4J279 ATG16L2-201ENST00000321297 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
TRAV21A0A0B4J279 HNRNPL-201ENST00000221419 2471 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
TRAV21A0A0B4J279 ST6GALNAC2-201ENST00000225276 2170 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
TRAV21A0A0B4J279 TXNRD2-205ENST00000400525 1874 ntTSL 5 BASIC18.06■□□□□ 0.48
TRAV21A0A0B4J279 PMS1-205ENST00000409985 1882 ntTSL 2 BASIC18.06■□□□□ 0.48
TRAV21A0A0B4J279 PIM3-201ENST00000360612 2369 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
TRAV21A0A0B4J279 BIN1-211ENST00000409400 2143 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
TRAV21A0A0B4J279 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC18.05■□□□□ 0.48
TRAV21A0A0B4J279 ANKRD9-205ENST00000560748 1413 ntAPPRIS P1 TSL 2 BASIC18.05■□□□□ 0.48
TRAV21A0A0B4J279 SPIRE2-205ENST00000563972 1823 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
TRAV21A0A0B4J279 G6PC3-201ENST00000269097 1533 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
TRAV21A0A0B4J279 SLC25A10-202ENST00000350690 1885 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
TRAV21A0A0B4J279 AC104109.3-201ENST00000519718 483 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
TRAV21A0A0B4J279 AC010501.1-201ENST00000606270 1962 ntBASIC18.04■□□□□ 0.48
TRAV21A0A0B4J279 SOWAHD-201ENST00000343905 1552 ntAPPRIS P1 BASIC18.04■□□□□ 0.48
TRAV21A0A0B4J279 CCND3-202ENST00000372988 2133 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
TRAV21A0A0B4J279 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC18.04■□□□□ 0.48
TRAV21A0A0B4J279 PLEKHA8-201ENST00000258679 2293 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
TRAV21A0A0B4J279 PDPK1-204ENST00000441549 1729 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
TRAV21A0A0B4J279 TBC1D10A-201ENST00000215790 2077 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
TRAV21A0A0B4J279 CIB2-202ENST00000539011 1511 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
TRAV21A0A0B4J279 CSNK1E-203ENST00000396832 2791 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
TRAV21A0A0B4J279 CABP1-202ENST00000316803 1658 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
TRAV21A0A0B4J279 CAPZB-203ENST00000375142 1686 ntAPPRIS ALT1 TSL 5 BASIC18.03■□□□□ 0.48
TRAV21A0A0B4J279 SPATA33-209ENST00000579310 1490 ntAPPRIS ALT2 TSL 2 BASIC18.03■□□□□ 0.48
TRAV21A0A0B4J279 FSD1-204ENST00000597590 1634 ntTSL 5 BASIC18.03■□□□□ 0.48
TRAV21A0A0B4J279 ATP6V0A2-209ENST00000613625 1620 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
TRAV21A0A0B4J279 TSPAN4-207ENST00000397411 1025 ntAPPRIS P1 TSL 2 BASIC18.03■□□□□ 0.48
TRAV21A0A0B4J279 AC010907.1-201ENST00000441632 807 ntTSL 3 BASIC18.03■□□□□ 0.48
TRAV21A0A0B4J279 CHML-204ENST00000638121 920 ntTSL 2 BASIC18.03■□□□□ 0.48
TRAV21A0A0B4J279 RPUSD1-201ENST00000007264 2050 ntAPPRIS P1 TSL 2 BASIC18.03■□□□□ 0.48
TRAV21A0A0B4J279 C2CD4D-201ENST00000454109 1757 ntAPPRIS P1 TSL 2 BASIC18.02■□□□□ 0.48
TRAV21A0A0B4J279 GSC-201ENST00000238558 1264 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
TRAV21A0A0B4J279 RNF166-201ENST00000312838 1883 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
TRAV21A0A0B4J279 SLC35D2-202ENST00000375257 889 ntTSL 2 BASIC18.02■□□□□ 0.48
TRAV21A0A0B4J279 CAMK1D-203ENST00000615792 1725 ntTSL 5 BASIC18.02■□□□□ 0.48
TRAV21A0A0B4J279 AL451007.3-201ENST00000640271 588 ntAPPRIS P1 BASIC18.02■□□□□ 0.48
TRAV21A0A0B4J279 AMIGO1-201ENST00000369862 2229 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.47
TRAV21A0A0B4J279 DACT1-206ENST00000556859 2239 ntAPPRIS ALT2 TSL 2 BASIC18.02■□□□□ 0.47
TRAV21A0A0B4J279 TMEM221-201ENST00000341130 1930 ntAPPRIS P1 TSL 2 BASIC18.02■□□□□ 0.47
TRAV21A0A0B4J279 MRPL4-201ENST00000253099 1455 ntAPPRIS P2 TSL 1 (best) BASIC18.01■□□□□ 0.47
TRAV21A0A0B4J279 SNAI3-AS1-204ENST00000567997 2048 ntBASIC18.01■□□□□ 0.47
TRAV21A0A0B4J279 LDLRAD3-203ENST00000528989 1879 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
TRAV21A0A0B4J279 KDM4C-203ENST00000401787 1406 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
TRAV21A0A0B4J279 IGFBPL1-201ENST00000377694 1093 ntAPPRIS P1 TSL 2 BASIC18.01■□□□□ 0.47
TRAV21A0A0B4J279 NME2-202ENST00000393190 866 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
TRAV21A0A0B4J279 TSPAN13-201ENST00000262067 2093 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
TRAV21A0A0B4J279 C12orf75-201ENST00000443585 1366 ntAPPRIS P1 TSL 2 BASIC18.01■□□□□ 0.47
TRAV21A0A0B4J279 NPAS3-203ENST00000357798 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 35.5 ms