Protein–RNA interactions for Protein: A0A0B4J249

TRAV5, T-cell receptor alpha variable 5 (Fragment), humanhuman

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV5A0A0B4J249 TMEM221-201ENST00000341130 1930 ntAPPRIS P1 TSL 2 BASIC18.96■□□□□ 0.63
TRAV5A0A0B4J249 RPUSD1-201ENST00000007264 2050 ntAPPRIS P1 TSL 2 BASIC18.96■□□□□ 0.63
TRAV5A0A0B4J249 WIPI2-204ENST00000404704 1663 ntTSL 5 BASIC18.96■□□□□ 0.63
TRAV5A0A0B4J249 VEGFA-226ENST00000611736 1239 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
TRAV5A0A0B4J249 TAZ-201ENST00000369776 1596 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
TRAV5A0A0B4J249 SLC25A10-202ENST00000350690 1885 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
TRAV5A0A0B4J249 PREB-201ENST00000260643 2166 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
TRAV5A0A0B4J249 PDIA6-201ENST00000272227 2338 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
TRAV5A0A0B4J249 NRM-201ENST00000259953 1755 ntAPPRIS P2 TSL 2 BASIC18.96■□□□□ 0.63
TRAV5A0A0B4J249 ERN1-208ENST00000606895 2068 ntBASIC18.96■□□□□ 0.63
TRAV5A0A0B4J249 MAD2L2-207ENST00000376692 1118 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
TRAV5A0A0B4J249 AC004837.3-201ENST00000420748 565 ntTSL 4 BASIC18.95■□□□□ 0.62
TRAV5A0A0B4J249 PCSK6-218ENST00000619160 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
TRAV5A0A0B4J249 U2AF1-204ENST00000459639 1675 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
TRAV5A0A0B4J249 U2AF1L5-204ENST00000623375 1675 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
TRAV5A0A0B4J249 TSGA13-204ENST00000456951 2046 ntAPPRIS P2 TSL 2 BASIC18.93■□□□□ 0.62
TRAV5A0A0B4J249 ARPC2-201ENST00000295685 1605 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
TRAV5A0A0B4J249 CASP9-202ENST00000348549 1621 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
TRAV5A0A0B4J249 TARBP1-201ENST00000040877 5130 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
TRAV5A0A0B4J249 RILPL1-205ENST00000636882 2258 ntTSL 5 BASIC18.93■□□□□ 0.62
TRAV5A0A0B4J249 ECHDC3-201ENST00000379215 1649 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
TRAV5A0A0B4J249 FBXL20-203ENST00000577399 1620 ntTSL 5 BASIC18.92■□□□□ 0.62
TRAV5A0A0B4J249 CDKN2A-201ENST00000304494 1218 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
TRAV5A0A0B4J249 NSMCE4A-201ENST00000369017 1224 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
TRAV5A0A0B4J249 CGGBP1-206ENST00000482016 1147 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
TRAV5A0A0B4J249 NDEL1-201ENST00000334527 2372 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
TRAV5A0A0B4J249 GTPBP3-203ENST00000361619 1894 ntTSL 2 BASIC18.92■□□□□ 0.62
TRAV5A0A0B4J249 KCNG1-201ENST00000371571 2211 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
TRAV5A0A0B4J249 GSR-205ENST00000541648 1410 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
TRAV5A0A0B4J249 PDPK1-204ENST00000441549 1729 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
TRAV5A0A0B4J249 RAP2A-201ENST00000245304 5487 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
TRAV5A0A0B4J249 PORCN-202ENST00000355961 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC18.91■□□□□ 0.62
TRAV5A0A0B4J249 PPAN-202ENST00000393793 1575 ntTSL 5 BASIC18.91■□□□□ 0.62
TRAV5A0A0B4J249 DYRK1B-201ENST00000323039 2535 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
TRAV5A0A0B4J249 H2AFV-204ENST00000350771 687 ntTSL 2 BASIC18.91■□□□□ 0.62
TRAV5A0A0B4J249 NMB-201ENST00000360476 1007 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
TRAV5A0A0B4J249 DNLZ-201ENST00000371738 724 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
TRAV5A0A0B4J249 U2AF1-203ENST00000398137 1019 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
TRAV5A0A0B4J249 PRSS41-201ENST00000399677 1127 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
TRAV5A0A0B4J249 U2AF1L5-212ENST00000639996 1019 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
TRAV5A0A0B4J249 AKT1S1-203ENST00000391831 2025 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
TRAV5A0A0B4J249 SP8-202ENST00000418710 1618 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
TRAV5A0A0B4J249 PEX26-202ENST00000399744 1672 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
TRAV5A0A0B4J249 HDAC11-206ENST00000405025 576 ntTSL 4 BASIC18.9■□□□□ 0.62
TRAV5A0A0B4J249 U2AF1L5-201ENST00000610664 897 ntAPPRIS P5 TSL 1 (best) BASIC18.9■□□□□ 0.62
TRAV5A0A0B4J249 ZNF821-201ENST00000313565 1874 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
TRAV5A0A0B4J249 CRIM1-201ENST00000280527 5912 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
TRAV5A0A0B4J249 FAM118A-205ENST00000441876 1776 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
TRAV5A0A0B4J249 E2F5-203ENST00000418930 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
TRAV5A0A0B4J249 VEGFA-207ENST00000413642 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
TRAV5A0A0B4J249 AC010501.1-201ENST00000606270 1962 ntBASIC18.89■□□□□ 0.61
TRAV5A0A0B4J249 C16orf72-201ENST00000327827 5953 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
TRAV5A0A0B4J249 AKT1-203ENST00000407796 2710 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
TRAV5A0A0B4J249 P2RX4-203ENST00000359949 1836 ntTSL 5 BASIC18.88■□□□□ 0.61
TRAV5A0A0B4J249 AGBL5-201ENST00000323064 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
TRAV5A0A0B4J249 LHX3-201ENST00000371746 2403 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
TRAV5A0A0B4J249 SLC35D2-203ENST00000375259 1361 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
TRAV5A0A0B4J249 NHLRC4-201ENST00000424439 2097 ntAPPRIS P1 TSL 3 BASIC18.87■□□□□ 0.61
TRAV5A0A0B4J249 PPP1R3F-205ENST00000495799 1537 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
TRAV5A0A0B4J249 ANKRD9-205ENST00000560748 1413 ntAPPRIS P1 TSL 2 BASIC18.87■□□□□ 0.61
TRAV5A0A0B4J249 AC087741.3-201ENST00000624270 1347 ntBASIC18.87■□□□□ 0.61
TRAV5A0A0B4J249 VSTM2L-202ENST00000373461 1959 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
TRAV5A0A0B4J249 LDLRAD3-203ENST00000528989 1879 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
TRAV5A0A0B4J249 ZDHHC16-201ENST00000345745 1519 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
TRAV5A0A0B4J249 RINL-208ENST00000598904 1846 ntAPPRIS P3 TSL 5 BASIC18.86■□□□□ 0.61
TRAV5A0A0B4J249 ARMC10-202ENST00000323716 2635 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
TRAV5A0A0B4J249 CAPZB-203ENST00000375142 1686 ntAPPRIS ALT1 TSL 5 BASIC18.85■□□□□ 0.61
TRAV5A0A0B4J249 FAM124A-204ENST00000615498 2383 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
TRAV5A0A0B4J249 PDK1-202ENST00000392571 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
TRAV5A0A0B4J249 FUT11-202ENST00000394790 2175 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
TRAV5A0A0B4J249 AMH-201ENST00000221496 1821 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
TRAV5A0A0B4J249 GATA3-AS1-201ENST00000355358 2214 ntTSL 2 BASIC18.85■□□□□ 0.61
TRAV5A0A0B4J249 BTBD2-201ENST00000255608 2649 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
TRAV5A0A0B4J249 AP000251.1-201ENST00000433071 822 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
TRAV5A0A0B4J249 SMIM12-205ENST00000456842 918 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
TRAV5A0A0B4J249 AP006261.1-201ENST00000584783 668 ntBASIC18.84■□□□□ 0.61
TRAV5A0A0B4J249 TMEM55B-202ENST00000398020 1696 ntAPPRIS ALT1 TSL 1 (best) BASIC18.84■□□□□ 0.61
TRAV5A0A0B4J249 BIN1-206ENST00000352848 2209 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
TRAV5A0A0B4J249 NPAS3-206ENST00000548645 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
TRAV5A0A0B4J249 AC113189.4-201ENST00000575331 5553 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
TRAV5A0A0B4J249 SRSF9-201ENST00000229390 1201 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
TRAV5A0A0B4J249 NRG1-221ENST00000614767 762 ntTSL 5 BASIC18.83■□□□□ 0.6
TRAV5A0A0B4J249 MED17-227ENST00000640521 2047 ntTSL 5 BASIC18.83■□□□□ 0.6
TRAV5A0A0B4J249 CAMK1D-203ENST00000615792 1725 ntTSL 5 BASIC18.83■□□□□ 0.6
TRAV5A0A0B4J249 SNX21-204ENST00000372542 1824 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
TRAV5A0A0B4J249 ANO1-202ENST00000355303 4790 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
TRAV5A0A0B4J249 FOXA2-201ENST00000377115 2401 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
TRAV5A0A0B4J249 C8orf58-201ENST00000289989 2016 ntAPPRIS P3 TSL 5 BASIC18.81■□□□□ 0.6
TRAV5A0A0B4J249 KRT72-201ENST00000293745 2015 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
TRAV5A0A0B4J249 TSPAN3-203ENST00000424443 1530 ntTSL 2 BASIC18.81■□□□□ 0.6
TRAV5A0A0B4J249 SRPK3-205ENST00000393786 1900 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
TRAV5A0A0B4J249 PLEKHJ1-201ENST00000326631 1206 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
TRAV5A0A0B4J249 TMEM147-202ENST00000392204 935 ntTSL 2 BASIC18.81■□□□□ 0.6
TRAV5A0A0B4J249 ZNRF1-201ENST00000320619 2479 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
TRAV5A0A0B4J249 FSD1-204ENST00000597590 1634 ntTSL 5 BASIC18.81■□□□□ 0.6
TRAV5A0A0B4J249 GSK3A-201ENST00000222330 2188 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
TRAV5A0A0B4J249 CCDC106-202ENST00000586790 2162 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
TRAV5A0A0B4J249 THRA-202ENST00000394121 2260 ntTSL 2 BASIC18.8■□□□□ 0.6
TRAV5A0A0B4J249 CTU1-201ENST00000421832 2087 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
TRAV5A0A0B4J249 AC142381.3-201ENST00000568208 1670 ntBASIC18.8■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 70.5 ms