Protein–RNA interactions for Protein: Q9Y5L0

TNPO3, Transportin-3, humanhuman

Known RBP Predictions only

Length 923 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNPO3Q9Y5L0 ARPC1B-201ENST00000252725 1551 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
TNPO3Q9Y5L0 EML3-212ENST00000494176 2901 ntTSL 2 BASIC17.4■□□□□ 0.38
TNPO3Q9Y5L0 EML3-216ENST00000529309 2909 ntTSL 2 BASIC17.4■□□□□ 0.38
TNPO3Q9Y5L0 SERPINB6-208ENST00000616722 2047 ntTSL 2 BASIC17.4■□□□□ 0.38
TNPO3Q9Y5L0 OBSL1-201ENST00000289656 2274 ntTSL 5 BASIC17.4■□□□□ 0.38
TNPO3Q9Y5L0 FST-202ENST00000396947 2538 ntTSL 5 BASIC17.4■□□□□ 0.38
TNPO3Q9Y5L0 AC073508.3-201ENST00000619697 1419 ntBASIC17.39■□□□□ 0.38
TNPO3Q9Y5L0 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC17.39■□□□□ 0.37
TNPO3Q9Y5L0 SH3BP4-202ENST00000392011 5194 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
TNPO3Q9Y5L0 CTSB-232ENST00000534510 1989 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
TNPO3Q9Y5L0 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC17.39■□□□□ 0.37
TNPO3Q9Y5L0 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
TNPO3Q9Y5L0 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
TNPO3Q9Y5L0 AP001922.1-201ENST00000499390 1504 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
TNPO3Q9Y5L0 HOPX-201ENST00000317745 1129 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
TNPO3Q9Y5L0 FGF8-201ENST00000320185 799 ntAPPRIS P4 TSL 1 (best) BASIC17.39■□□□□ 0.37
TNPO3Q9Y5L0 TMUB1-205ENST00000482202 899 ntAPPRIS P1 TSL 3 BASIC17.39■□□□□ 0.37
TNPO3Q9Y5L0 AC004080.5-201ENST00000498652 368 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
TNPO3Q9Y5L0 ZNF444P1-201ENST00000559497 298 ntBASIC17.39■□□□□ 0.37
TNPO3Q9Y5L0 AC092118.1-202ENST00000568697 718 ntTSL 3 BASIC17.39■□□□□ 0.37
TNPO3Q9Y5L0 C17orf62-221ENST00000581196 668 ntTSL 4 BASIC17.39■□□□□ 0.37
TNPO3Q9Y5L0 UQCR11-201ENST00000585671 753 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
TNPO3Q9Y5L0 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC17.39■□□□□ 0.37
TNPO3Q9Y5L0 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
TNPO3Q9Y5L0 ILKAP-212ENST00000622223 1088 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
TNPO3Q9Y5L0 ANKRD20A8P-203ENST00000641373 517 ntBASIC17.39■□□□□ 0.37
TNPO3Q9Y5L0 CORO6-210ENST00000580212 2345 ntTSL 5 BASIC17.39■□□□□ 0.37
TNPO3Q9Y5L0 PLEKHM2-201ENST00000375793 4004 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
TNPO3Q9Y5L0 AL023806.1-201ENST00000603994 1649 ntBASIC17.39■□□□□ 0.37
TNPO3Q9Y5L0 PYGL-201ENST00000216392 3048 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
TNPO3Q9Y5L0 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC17.39■□□□□ 0.37
TNPO3Q9Y5L0 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
TNPO3Q9Y5L0 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
TNPO3Q9Y5L0 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC17.39■□□□□ 0.37
TNPO3Q9Y5L0 SNAPC3-202ENST00000380821 5680 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
TNPO3Q9Y5L0 THAP12-201ENST00000260045 3300 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
TNPO3Q9Y5L0 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
TNPO3Q9Y5L0 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC17.38■□□□□ 0.37
TNPO3Q9Y5L0 GSTO2-201ENST00000338595 1179 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
TNPO3Q9Y5L0 PRICKLE4-202ENST00000394260 1035 ntAPPRIS ALT2 TSL 2 BASIC17.38■□□□□ 0.37
TNPO3Q9Y5L0 PRICKLE4-203ENST00000394263 1155 ntAPPRIS P2 TSL 5 BASIC17.38■□□□□ 0.37
TNPO3Q9Y5L0 MDK-205ENST00000405308 1166 ntAPPRIS P2 TSL 2 BASIC17.38■□□□□ 0.37
TNPO3Q9Y5L0 AC092159.3-201ENST00000439196 571 ntTSL 4 BASIC17.38■□□□□ 0.37
TNPO3Q9Y5L0 AC012618.3-202ENST00000440004 472 ntTSL 4 BASIC17.38■□□□□ 0.37
TNPO3Q9Y5L0 CDKN2AIPNL-202ENST00000458198 1223 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
TNPO3Q9Y5L0 SNX5-210ENST00000481323 562 ntTSL 3 BASIC17.38■□□□□ 0.37
TNPO3Q9Y5L0 SLF2-205ENST00000609386 891 ntAPPRIS ALT2 BASIC17.38■□□□□ 0.37
TNPO3Q9Y5L0 KLF3-201ENST00000261438 5122 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
TNPO3Q9Y5L0 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC17.38■□□□□ 0.37
TNPO3Q9Y5L0 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC17.38■□□□□ 0.37
TNPO3Q9Y5L0 GAB1-201ENST00000262994 2648 ntAPPRIS ALT1 TSL 1 (best) BASIC17.38■□□□□ 0.37
TNPO3Q9Y5L0 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
TNPO3Q9Y5L0 SMIM24-201ENST00000215531 1329 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
TNPO3Q9Y5L0 ST3GAL3-205ENST00000347631 1324 ntTSL 5 BASIC17.38■□□□□ 0.37
TNPO3Q9Y5L0 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
TNPO3Q9Y5L0 FAM50A-202ENST00000393600 1352 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
TNPO3Q9Y5L0 KCNH1-214ENST00000640566 1365 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
TNPO3Q9Y5L0 AL645608.8-201ENST00000606034 2086 ntBASIC17.38■□□□□ 0.37
TNPO3Q9Y5L0 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC17.38■□□□□ 0.37
TNPO3Q9Y5L0 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC17.38■□□□□ 0.37
TNPO3Q9Y5L0 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
TNPO3Q9Y5L0 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
TNPO3Q9Y5L0 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC17.37■□□□□ 0.37
TNPO3Q9Y5L0 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
TNPO3Q9Y5L0 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC17.37■□□□□ 0.37
TNPO3Q9Y5L0 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC17.37■□□□□ 0.37
TNPO3Q9Y5L0 ST8SIA5-201ENST00000315087 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
TNPO3Q9Y5L0 AC139713.2-201ENST00000641328 2723 ntBASIC17.37■□□□□ 0.37
TNPO3Q9Y5L0 ZNF256-202ENST00000598928 1958 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
TNPO3Q9Y5L0 KDM6A-213ENST00000611820 5924 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
TNPO3Q9Y5L0 PDCD7-201ENST00000204549 2851 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
TNPO3Q9Y5L0 INF2-204ENST00000398337 1689 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
TNPO3Q9Y5L0 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
TNPO3Q9Y5L0 TMEM190-201ENST00000291934 593 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
TNPO3Q9Y5L0 CD7-201ENST00000312648 1281 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
TNPO3Q9Y5L0 NDUFA1-201ENST00000371437 766 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
TNPO3Q9Y5L0 OARD1-201ENST00000373154 1129 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
TNPO3Q9Y5L0 MIR662-201ENST00000384847 95 ntBASIC17.37■□□□□ 0.37
TNPO3Q9Y5L0 IGHGP-201ENST00000390555 1178 ntBASIC17.37■□□□□ 0.37
TNPO3Q9Y5L0 RNF152P1-201ENST00000397754 604 ntBASIC17.37■□□□□ 0.37
TNPO3Q9Y5L0 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
TNPO3Q9Y5L0 TSPY5P-201ENST00000426936 936 ntBASIC17.37■□□□□ 0.37
TNPO3Q9Y5L0 AC117947.1-201ENST00000427448 529 ntBASIC17.37■□□□□ 0.37
TNPO3Q9Y5L0 AC108025.1-201ENST00000453678 1058 ntTSL 5 BASIC17.37■□□□□ 0.37
TNPO3Q9Y5L0 AP003733.1-201ENST00000491725 852 ntBASIC17.37■□□□□ 0.37
TNPO3Q9Y5L0 AC112698.1-201ENST00000510299 916 ntBASIC17.37■□□□□ 0.37
TNPO3Q9Y5L0 LY6E-214ENST00000522971 857 ntAPPRIS P2 TSL 2 BASIC17.37■□□□□ 0.37
TNPO3Q9Y5L0 AC087623.2-201ENST00000528407 534 ntTSL 4 BASIC17.37■□□□□ 0.37
TNPO3Q9Y5L0 ISCU-208ENST00000539593 1071 ntTSL 2 BASIC17.37■□□□□ 0.37
TNPO3Q9Y5L0 PHB2-207ENST00000542912 1138 ntTSL 5 BASIC17.37■□□□□ 0.37
TNPO3Q9Y5L0 AC090970.2-201ENST00000561318 865 ntTSL 5 BASIC17.37■□□□□ 0.37
TNPO3Q9Y5L0 P4HB-223ENST00000576390 439 ntTSL 4 BASIC17.37■□□□□ 0.37
TNPO3Q9Y5L0 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
TNPO3Q9Y5L0 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC17.37■□□□□ 0.37
TNPO3Q9Y5L0 SPEG-225ENST00000617028 815 ntTSL 5 BASIC17.37■□□□□ 0.37
TNPO3Q9Y5L0 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC17.37■□□□□ 0.37
TNPO3Q9Y5L0 MOGS-205ENST00000452063 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
TNPO3Q9Y5L0 BIRC7-202ENST00000342412 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
TNPO3Q9Y5L0 SLC7A9-204ENST00000590341 1752 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
TNPO3Q9Y5L0 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 33.2 ms