Protein–RNA interactions for Protein: Q9Y5G1

PCDHGB3, Protocadherin gamma-B3, humanhuman

Predictions only

Length 929 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB3Q9Y5G1 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC16.95■□□□□ 0.3
PCDHGB3Q9Y5G1 CASZ1-202ENST00000377022 7936 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
PCDHGB3Q9Y5G1 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
PCDHGB3Q9Y5G1 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
PCDHGB3Q9Y5G1 RRAGD-202ENST00000369415 4900 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
PCDHGB3Q9Y5G1 ARHGAP8-202ENST00000356099 1584 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
PCDHGB3Q9Y5G1 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC16.94■□□□□ 0.3
PCDHGB3Q9Y5G1 AANAT-201ENST00000250615 1913 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
PCDHGB3Q9Y5G1 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
PCDHGB3Q9Y5G1 DIABLO-206ENST00000443649 2250 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
PCDHGB3Q9Y5G1 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
PCDHGB3Q9Y5G1 HMGXB3-201ENST00000502717 4974 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
PCDHGB3Q9Y5G1 GNGT2-201ENST00000300406 889 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
PCDHGB3Q9Y5G1 FAM19A3-201ENST00000361886 1056 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
PCDHGB3Q9Y5G1 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC16.94■□□□□ 0.3
PCDHGB3Q9Y5G1 AC003075.1-204ENST00000433005 540 ntTSL 2 BASIC16.94■□□□□ 0.3
PCDHGB3Q9Y5G1 C10orf142-201ENST00000619243 1110 ntAPPRIS P2 TSL 2 BASIC16.94■□□□□ 0.3
PCDHGB3Q9Y5G1 C1QTNF8-202ENST00000621771 897 ntTSL 5 BASIC16.94■□□□□ 0.3
PCDHGB3Q9Y5G1 AL023973.1-201ENST00000624619 620 ntBASIC16.94■□□□□ 0.3
PCDHGB3Q9Y5G1 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
PCDHGB3Q9Y5G1 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
PCDHGB3Q9Y5G1 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
PCDHGB3Q9Y5G1 TLE2-219ENST00000591529 2483 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
PCDHGB3Q9Y5G1 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC16.94■□□□□ 0.3
PCDHGB3Q9Y5G1 NFATC1-206ENST00000542384 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
PCDHGB3Q9Y5G1 CADM3-201ENST00000368124 2546 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
PCDHGB3Q9Y5G1 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
PCDHGB3Q9Y5G1 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
PCDHGB3Q9Y5G1 WDFY4-202ENST00000360890 2193 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
PCDHGB3Q9Y5G1 RGS3-211ENST00000462403 2155 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
PCDHGB3Q9Y5G1 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
PCDHGB3Q9Y5G1 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC16.93■□□□□ 0.3
PCDHGB3Q9Y5G1 COL4A2-201ENST00000360467 6281 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
PCDHGB3Q9Y5G1 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
PCDHGB3Q9Y5G1 GATAD2A-202ENST00000360315 5671 ntAPPRIS P3 TSL 5 BASIC16.93■□□□□ 0.3
PCDHGB3Q9Y5G1 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC16.93■□□□□ 0.3
PCDHGB3Q9Y5G1 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
PCDHGB3Q9Y5G1 PRSS36-207ENST00000569305 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
PCDHGB3Q9Y5G1 ADAM23-201ENST00000264377 6330 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
PCDHGB3Q9Y5G1 AC005833.1-201ENST00000280684 4237 ntAPPRIS P1 BASIC16.93■□□□□ 0.3
PCDHGB3Q9Y5G1 MTMR14-203ENST00000353332 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
PCDHGB3Q9Y5G1 NME9-203ENST00000383180 2133 ntTSL 2 BASIC16.93■□□□□ 0.3
PCDHGB3Q9Y5G1 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
PCDHGB3Q9Y5G1 BPGM-203ENST00000418040 1870 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
PCDHGB3Q9Y5G1 DTX2-206ENST00000430490 2623 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
PCDHGB3Q9Y5G1 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC16.93■□□□□ 0.3
PCDHGB3Q9Y5G1 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC16.93■□□□□ 0.3
PCDHGB3Q9Y5G1 ARFGAP2-229ENST00000627920 2613 ntTSL 2 BASIC16.93■□□□□ 0.3
PCDHGB3Q9Y5G1 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC16.93■□□□□ 0.3
PCDHGB3Q9Y5G1 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
PCDHGB3Q9Y5G1 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
PCDHGB3Q9Y5G1 TYMSOS-201ENST00000323813 844 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
PCDHGB3Q9Y5G1 PTGDS-202ENST00000371625 807 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
PCDHGB3Q9Y5G1 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC16.93■□□□□ 0.3
PCDHGB3Q9Y5G1 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC16.93■□□□□ 0.3
PCDHGB3Q9Y5G1 PVRIG2P-201ENST00000435460 978 ntBASIC16.93■□□□□ 0.3
PCDHGB3Q9Y5G1 SGO1-208ENST00000437051 1187 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
PCDHGB3Q9Y5G1 AKTIP-212ENST00000570004 1162 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
PCDHGB3Q9Y5G1 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
PCDHGB3Q9Y5G1 AP000550.4-202ENST00000639755 178 ntBASIC16.93■□□□□ 0.3
PCDHGB3Q9Y5G1 RCC1-202ENST00000373832 2424 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
PCDHGB3Q9Y5G1 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
PCDHGB3Q9Y5G1 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
PCDHGB3Q9Y5G1 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
PCDHGB3Q9Y5G1 CAMK2G-205ENST00000372765 1822 ntTSL 5 BASIC16.93■□□□□ 0.3
PCDHGB3Q9Y5G1 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC16.93■□□□□ 0.3
PCDHGB3Q9Y5G1 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC16.93■□□□□ 0.3
PCDHGB3Q9Y5G1 ENC1-205ENST00000510316 5381 ntTSL 2 BASIC16.93■□□□□ 0.3
PCDHGB3Q9Y5G1 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
PCDHGB3Q9Y5G1 RAB17-201ENST00000264601 1966 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
PCDHGB3Q9Y5G1 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC16.93■□□□□ 0.3
PCDHGB3Q9Y5G1 SEMA6C-209ENST00000613223 1950 ntTSL 5 BASIC16.93■□□□□ 0.3
PCDHGB3Q9Y5G1 AC009053.2-201ENST00000563701 2365 ntBASIC16.93■□□□□ 0.3
PCDHGB3Q9Y5G1 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC16.93■□□□□ 0.3
PCDHGB3Q9Y5G1 CHUK-201ENST00000370397 3625 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
PCDHGB3Q9Y5G1 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
PCDHGB3Q9Y5G1 ST8SIA5-201ENST00000315087 2716 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
PCDHGB3Q9Y5G1 CPT2-208ENST00000636891 2746 ntTSL 5 BASIC16.92■□□□□ 0.3
PCDHGB3Q9Y5G1 FO681492.1-201ENST00000623662 5321 ntAPPRIS P5 TSL 2 BASIC16.92■□□□□ 0.3
PCDHGB3Q9Y5G1 COL4A3BP-203ENST00000380494 5651 ntTSL 2 BASIC16.92■□□□□ 0.3
PCDHGB3Q9Y5G1 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
PCDHGB3Q9Y5G1 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
PCDHGB3Q9Y5G1 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
PCDHGB3Q9Y5G1 ATXN7-210ENST00000487717 3683 ntAPPRIS P3 TSL 5 BASIC16.92■□□□□ 0.3
PCDHGB3Q9Y5G1 PIEZO1-202ENST00000327397 1246 ntTSL 2 BASIC16.92■□□□□ 0.3
PCDHGB3Q9Y5G1 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
PCDHGB3Q9Y5G1 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
PCDHGB3Q9Y5G1 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
PCDHGB3Q9Y5G1 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC16.92■□□□□ 0.3
PCDHGB3Q9Y5G1 SURF4-206ENST00000485435 1206 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
PCDHGB3Q9Y5G1 AP003396.1-201ENST00000501918 507 ntTSL 5 BASIC16.92■□□□□ 0.3
PCDHGB3Q9Y5G1 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC16.92■□□□□ 0.3
PCDHGB3Q9Y5G1 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC16.92■□□□□ 0.3
PCDHGB3Q9Y5G1 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
PCDHGB3Q9Y5G1 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
PCDHGB3Q9Y5G1 TMEM119-201ENST00000392806 2707 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
PCDHGB3Q9Y5G1 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
PCDHGB3Q9Y5G1 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC16.92■□□□□ 0.3
PCDHGB3Q9Y5G1 AL024508.2-201ENST00000607749 1894 ntBASIC16.92■□□□□ 0.3
PCDHGB3Q9Y5G1 MAP7-209ENST00000618822 4497 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 27.6 ms