Protein–RNA interactions for Protein: Q9UPN3

MACF1, Microtubule-actin cross-linking factor 1, isoforms 1/2/3/5, humanhuman

Known RBP Predictions only

Length 7,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MACF1Q9UPN3 NEU3-203ENST00000529024 581 ntTSL 3 BASIC7.22□□□□□ -1.25
MACF1Q9UPN3 AC022167.4-201ENST00000570290 498 ntTSL 3 BASIC7.22□□□□□ -1.25
MACF1Q9UPN3 KRT16P2-202ENST00000579062 563 ntTSL 4 BASIC7.22□□□□□ -1.25
MACF1Q9UPN3 BID-203ENST00000399765 1879 ntTSL 2 BASIC7.22□□□□□ -1.25
MACF1Q9UPN3 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
MACF1Q9UPN3 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC7.22□□□□□ -1.25
MACF1Q9UPN3 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
MACF1Q9UPN3 ADK-206ENST00000541550 2222 ntTSL 2 BASIC7.22□□□□□ -1.25
MACF1Q9UPN3 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC7.21□□□□□ -1.25
MACF1Q9UPN3 FBXO15-201ENST00000419743 1708 ntAPPRIS P2 TSL 2 BASIC7.21□□□□□ -1.25
MACF1Q9UPN3 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC7.21□□□□□ -1.25
MACF1Q9UPN3 CARTPT-201ENST00000296777 915 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.25
MACF1Q9UPN3 UBXN1-202ENST00000301935 1153 ntAPPRIS P2 TSL 1 (best) BASIC7.21□□□□□ -1.25
MACF1Q9UPN3 TPM1-207ENST00000403994 1049 ntAPPRIS ALT1 TSL 1 (best) BASIC7.21□□□□□ -1.25
MACF1Q9UPN3 AC006033.1-201ENST00000440505 426 ntBASIC7.21□□□□□ -1.25
MACF1Q9UPN3 TMEM220-AS1-206ENST00000583343 876 ntTSL 3 BASIC7.21□□□□□ -1.25
MACF1Q9UPN3 UBXN1-218ENST00000616865 1002 ntTSL 5 BASIC7.21□□□□□ -1.25
MACF1Q9UPN3 AC018665.1-201ENST00000622927 1362 ntBASIC7.21□□□□□ -1.25
MACF1Q9UPN3 CETN1-201ENST00000327228 1758 ntAPPRIS P1 BASIC7.21□□□□□ -1.25
MACF1Q9UPN3 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC7.21□□□□□ -1.25
MACF1Q9UPN3 PDLIM1-201ENST00000329399 1452 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.25
MACF1Q9UPN3 RAB29-201ENST00000235932 1723 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.25
MACF1Q9UPN3 PTHLH-203ENST00000395872 1318 ntAPPRIS ALT1 TSL 5 BASIC7.21□□□□□ -1.25
MACF1Q9UPN3 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC7.21□□□□□ -1.25
MACF1Q9UPN3 RPL37A-203ENST00000427280 698 ntTSL 5 BASIC7.21□□□□□ -1.25
MACF1Q9UPN3 AP000345.1-201ENST00000454863 569 ntTSL 4 BASIC7.21□□□□□ -1.25
MACF1Q9UPN3 RPL37A-206ENST00000456586 401 ntTSL 5 BASIC7.21□□□□□ -1.25
MACF1Q9UPN3 AC090515.4-201ENST00000558042 450 ntTSL 3 BASIC7.21□□□□□ -1.25
MACF1Q9UPN3 RORA-AS1-205ENST00000559824 761 ntTSL 3 BASIC7.21□□□□□ -1.25
MACF1Q9UPN3 AC137723.1-201ENST00000584705 709 ntTSL 3 BASIC7.21□□□□□ -1.25
MACF1Q9UPN3 RPL37A-211ENST00000598925 775 ntTSL 5 BASIC7.21□□□□□ -1.25
MACF1Q9UPN3 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC7.21□□□□□ -1.25
MACF1Q9UPN3 GFI1B-208ENST00000636263 1604 ntTSL 5 BASIC7.21□□□□□ -1.25
MACF1Q9UPN3 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC7.21□□□□□ -1.25
MACF1Q9UPN3 TMEM185A-208ENST00000611119 2662 ntTSL 2 BASIC7.21□□□□□ -1.25
MACF1Q9UPN3 AC010460.3-201ENST00000511359 1579 ntBASIC7.21□□□□□ -1.25
MACF1Q9UPN3 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC7.21□□□□□ -1.26
MACF1Q9UPN3 EEF1B2-201ENST00000236957 844 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.26
MACF1Q9UPN3 VAPA-201ENST00000340541 1227 ntTSL 5 BASIC7.21□□□□□ -1.26
MACF1Q9UPN3 MIR346-201ENST00000362234 95 ntBASIC7.21□□□□□ -1.26
MACF1Q9UPN3 MAPK15-202ENST00000395107 834 ntTSL 1 (best) BASIC7.21□□□□□ -1.26
MACF1Q9UPN3 AF131215.3-201ENST00000532453 639 ntTSL 1 (best) BASIC7.21□□□□□ -1.26
MACF1Q9UPN3 AL031717.1-201ENST00000569670 565 ntTSL 4 BASIC7.21□□□□□ -1.26
MACF1Q9UPN3 LINC00116-203ENST00000611969 441 ntAPPRIS ALT2 TSL 1 (best) BASIC7.21□□□□□ -1.26
MACF1Q9UPN3 ZNFX1-AS1_1.1-201ENST00000615787 198 ntBASIC7.21□□□□□ -1.26
MACF1Q9UPN3 Metazoa_SRP.80-201ENST00000619894 320 ntBASIC7.21□□□□□ -1.26
MACF1Q9UPN3 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.26
MACF1Q9UPN3 LEXM-201ENST00000358193 1777 ntAPPRIS P3 TSL 1 (best) BASIC7.21□□□□□ -1.26
MACF1Q9UPN3 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC7.21□□□□□ -1.26
MACF1Q9UPN3 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.26
MACF1Q9UPN3 AC087294.1-202ENST00000439136 487 ntTSL 3 BASIC7.21□□□□□ -1.26
MACF1Q9UPN3 AL121845.2-201ENST00000467211 252 ntAPPRIS P1 TSL 3 BASIC7.21□□□□□ -1.26
MACF1Q9UPN3 AC087294.1-201ENST00000580291 1152 ntTSL 2 BASIC7.21□□□□□ -1.26
MACF1Q9UPN3 BTNL10-201ENST00000595971 695 ntBASIC7.21□□□□□ -1.26
MACF1Q9UPN3 SPDYE12P-201ENST00000618416 771 ntBASIC7.21□□□□□ -1.26
MACF1Q9UPN3 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC7.21□□□□□ -1.26
MACF1Q9UPN3 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC7.21□□□□□ -1.26
MACF1Q9UPN3 SZT2-202ENST00000372450 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC7.21□□□□□ -1.26
MACF1Q9UPN3 CYB5A-203ENST00000397914 619 ntTSL 3 BASIC7.21□□□□□ -1.26
MACF1Q9UPN3 ZNF564-202ENST00000416136 255 ntTSL 3 BASIC7.21□□□□□ -1.26
MACF1Q9UPN3 CALR4P-201ENST00000431943 946 ntBASIC7.21□□□□□ -1.26
MACF1Q9UPN3 RPL13AP19-201ENST00000434320 584 ntBASIC7.21□□□□□ -1.26
MACF1Q9UPN3 COMMD4-207ENST00000562789 746 ntTSL 2 BASIC7.21□□□□□ -1.26
MACF1Q9UPN3 SIRT2-219ENST00000613542 1170 ntTSL 5 BASIC7.21□□□□□ -1.26
MACF1Q9UPN3 RBM4B-203ENST00000525754 2339 ntAPPRIS P1 TSL 2 BASIC7.21□□□□□ -1.26
MACF1Q9UPN3 CAP2-202ENST00000378990 1812 ntTSL 2 BASIC7.21□□□□□ -1.26
MACF1Q9UPN3 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.26
MACF1Q9UPN3 AL391422.3-201ENST00000603791 2761 ntBASIC7.21□□□□□ -1.26
MACF1Q9UPN3 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.26
MACF1Q9UPN3 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.26
MACF1Q9UPN3 NDUFV1-223ENST00000532303 1493 ntTSL 2 BASIC7.21□□□□□ -1.26
MACF1Q9UPN3 HIST1H2AJ-201ENST00000333151 387 ntAPPRIS P1 BASIC7.21□□□□□ -1.26
MACF1Q9UPN3 CACNB2-206ENST00000377328 1233 ntTSL 1 (best) BASIC7.21□□□□□ -1.26
MACF1Q9UPN3 AL157392.3-216ENST00000437446 462 ntTSL 3 BASIC7.21□□□□□ -1.26
MACF1Q9UPN3 SNRPB-202ENST00000438552 1008 ntAPPRIS P4 TSL 1 (best) BASIC7.21□□□□□ -1.26
MACF1Q9UPN3 Z98752.1-201ENST00000442482 518 ntTSL 3 BASIC7.21□□□□□ -1.26
MACF1Q9UPN3 RPL27A-202ENST00000524496 558 ntTSL 3 BASIC7.21□□□□□ -1.26
MACF1Q9UPN3 UBXN1-214ENST00000533000 367 ntTSL 5 BASIC7.21□□□□□ -1.26
MACF1Q9UPN3 AC040162.1-202ENST00000573493 573 ntAPPRIS P1 TSL 3 BASIC7.21□□□□□ -1.26
MACF1Q9UPN3 KLC1-205ENST00000380038 2322 ntTSL 2 BASIC7.21□□□□□ -1.26
MACF1Q9UPN3 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC7.2□□□□□ -1.26
MACF1Q9UPN3 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
MACF1Q9UPN3 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC7.2□□□□□ -1.26
MACF1Q9UPN3 MBOAT7-205ENST00000431666 2471 ntTSL 1 (best) BASIC7.2□□□□□ -1.26
MACF1Q9UPN3 PIGF-202ENST00000306465 1061 ntTSL 1 (best) BASIC7.2□□□□□ -1.26
MACF1Q9UPN3 CNR1-201ENST00000362094 1252 ntTSL 1 (best) BASIC7.2□□□□□ -1.26
MACF1Q9UPN3 LINC01248-201ENST00000458264 468 ntTSL 3 BASIC7.2□□□□□ -1.26
MACF1Q9UPN3 CD81-207ENST00000481687 890 ntTSL 2 BASIC7.2□□□□□ -1.26
MACF1Q9UPN3 ZNF226-211ENST00000588742 447 ntTSL 1 (best) BASIC7.2□□□□□ -1.26
MACF1Q9UPN3 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
MACF1Q9UPN3 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC7.2□□□□□ -1.26
MACF1Q9UPN3 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC7.2□□□□□ -1.26
MACF1Q9UPN3 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
MACF1Q9UPN3 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC7.2□□□□□ -1.26
MACF1Q9UPN3 IER3-201ENST00000259874 1244 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
MACF1Q9UPN3 ARL16-201ENST00000397498 1227 ntTSL 1 (best) BASIC7.2□□□□□ -1.26
MACF1Q9UPN3 RAB35-202ENST00000534951 939 ntTSL 2 BASIC7.2□□□□□ -1.26
MACF1Q9UPN3 AP003419.4-201ENST00000616071 517 ntBASIC7.2□□□□□ -1.26
MACF1Q9UPN3 ARL16-214ENST00000621051 1181 ntTSL 1 (best) BASIC7.2□□□□□ -1.26
MACF1Q9UPN3 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC7.2□□□□□ -1.26
Retrieved 100 of 98,524 protein–RNA pairs in 29.8 ms