Protein–RNA interactions for Protein: Q9HD20

ATP13A1, Manganese-transporting ATPase 13A1, humanhuman

Predictions only

Length 1,204 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP13A1Q9HD20 CSAD-209ENST00000453446 1774 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
ATP13A1Q9HD20 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC18.26■□□□□ 0.51
ATP13A1Q9HD20 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
ATP13A1Q9HD20 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
ATP13A1Q9HD20 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
ATP13A1Q9HD20 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC18.26■□□□□ 0.51
ATP13A1Q9HD20 PLA2G4C-222ENST00000599921 1984 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
ATP13A1Q9HD20 AL133373.2-201ENST00000623187 2828 ntBASIC18.26■□□□□ 0.51
ATP13A1Q9HD20 KAZN-208ENST00000636203 6874 ntTSL 5 BASIC18.26■□□□□ 0.51
ATP13A1Q9HD20 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
ATP13A1Q9HD20 ISLR2-201ENST00000361742 4817 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
ATP13A1Q9HD20 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
ATP13A1Q9HD20 ST6GALNAC6-201ENST00000291839 2280 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
ATP13A1Q9HD20 PRRT2-216ENST00000637403 2033 ntTSL 5 BASIC18.25■□□□□ 0.51
ATP13A1Q9HD20 C6orf136-203ENST00000376473 1402 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
ATP13A1Q9HD20 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
ATP13A1Q9HD20 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
ATP13A1Q9HD20 KRT18P55-202ENST00000578578 1546 ntBASIC18.25■□□□□ 0.51
ATP13A1Q9HD20 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC18.25■□□□□ 0.51
ATP13A1Q9HD20 CHIC2-201ENST00000263921 1194 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
ATP13A1Q9HD20 SLX1A-202ENST00000345535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
ATP13A1Q9HD20 SLX1B-202ENST00000351581 762 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
ATP13A1Q9HD20 HYI-201ENST00000372425 1265 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
ATP13A1Q9HD20 NUS1P2-201ENST00000417358 873 ntBASIC18.25■□□□□ 0.51
ATP13A1Q9HD20 SDHD-206ENST00000528182 754 ntTSL 3 BASIC18.25■□□□□ 0.51
ATP13A1Q9HD20 BARHL1-202ENST00000542090 1197 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
ATP13A1Q9HD20 AC013356.2-201ENST00000559730 729 ntTSL 3 BASIC18.25■□□□□ 0.51
ATP13A1Q9HD20 SPINK2-205ENST00000616980 677 ntTSL 5 BASIC18.25■□□□□ 0.51
ATP13A1Q9HD20 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC18.25■□□□□ 0.51
ATP13A1Q9HD20 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC18.25■□□□□ 0.51
ATP13A1Q9HD20 CD276-203ENST00000537340 2439 ntTSL 2 BASIC18.25■□□□□ 0.51
ATP13A1Q9HD20 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC18.25■□□□□ 0.51
ATP13A1Q9HD20 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC18.25■□□□□ 0.51
ATP13A1Q9HD20 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC18.25■□□□□ 0.51
ATP13A1Q9HD20 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
ATP13A1Q9HD20 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
ATP13A1Q9HD20 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
ATP13A1Q9HD20 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
ATP13A1Q9HD20 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC18.25■□□□□ 0.51
ATP13A1Q9HD20 CNTNAP3-204ENST00000377656 4986 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
ATP13A1Q9HD20 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
ATP13A1Q9HD20 ARHGAP26-201ENST00000274498 6862 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
ATP13A1Q9HD20 GPANK1-201ENST00000375893 1598 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
ATP13A1Q9HD20 ZDHHC4-205ENST00000396713 1552 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
ATP13A1Q9HD20 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
ATP13A1Q9HD20 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
ATP13A1Q9HD20 OLFM2-203ENST00000590841 1665 ntTSL 2 BASIC18.25■□□□□ 0.51
ATP13A1Q9HD20 MOCS2-202ENST00000396954 1785 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
ATP13A1Q9HD20 SH3BP5-203ENST00000408919 1880 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
ATP13A1Q9HD20 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC18.24■□□□□ 0.51
ATP13A1Q9HD20 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC18.24■□□□□ 0.51
ATP13A1Q9HD20 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
ATP13A1Q9HD20 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
ATP13A1Q9HD20 ADCY8-201ENST00000286355 5938 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
ATP13A1Q9HD20 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
ATP13A1Q9HD20 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
ATP13A1Q9HD20 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
ATP13A1Q9HD20 SLC22A1-201ENST00000324965 1521 ntTSL 5 BASIC18.24■□□□□ 0.51
ATP13A1Q9HD20 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC18.24■□□□□ 0.51
ATP13A1Q9HD20 ALKBH5-203ENST00000541285 1605 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
ATP13A1Q9HD20 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC18.24■□□□□ 0.51
ATP13A1Q9HD20 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
ATP13A1Q9HD20 ANXA6-201ENST00000354546 2593 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
ATP13A1Q9HD20 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
ATP13A1Q9HD20 BOLA1-202ENST00000369152 859 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
ATP13A1Q9HD20 RPUSD3-201ENST00000383820 1225 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
ATP13A1Q9HD20 SBDSP1-202ENST00000423945 618 ntTSL 3 BASIC18.24■□□□□ 0.51
ATP13A1Q9HD20 MEG3-211ENST00000452514 461 ntTSL 3 BASIC18.24■□□□□ 0.51
ATP13A1Q9HD20 TNFSF13-208ENST00000483039 959 ntTSL 2 BASIC18.24■□□□□ 0.51
ATP13A1Q9HD20 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC18.24■□□□□ 0.51
ATP13A1Q9HD20 AC025259.3-201ENST00000564531 542 ntTSL 3 BASIC18.24■□□□□ 0.51
ATP13A1Q9HD20 ZNF772-206ENST00000600175 737 ntTSL 2 BASIC18.24■□□□□ 0.51
ATP13A1Q9HD20 AL121772.3-201ENST00000610840 674 ntBASIC18.24■□□□□ 0.51
ATP13A1Q9HD20 SMN2-213ENST00000614240 804 ntAPPRIS ALT2 TSL 5 BASIC18.24■□□□□ 0.51
ATP13A1Q9HD20 AL162497.1-201ENST00000615635 518 ntTSL 4 BASIC18.24■□□□□ 0.51
ATP13A1Q9HD20 YDJC-201ENST00000292778 1351 ntAPPRIS P1 TSL 2 BASIC18.24■□□□□ 0.51
ATP13A1Q9HD20 IGSF9B-206ENST00000533871 5050 ntAPPRIS P2 TSL 5 BASIC18.24■□□□□ 0.51
ATP13A1Q9HD20 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
ATP13A1Q9HD20 HSD11B1L-223ENST00000616276 1580 ntAPPRIS ALT2 TSL 5 BASIC18.24■□□□□ 0.51
ATP13A1Q9HD20 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
ATP13A1Q9HD20 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
ATP13A1Q9HD20 TBC1D3P5-201ENST00000579401 1545 ntBASIC18.23■□□□□ 0.51
ATP13A1Q9HD20 DMKN-213ENST00000447113 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
ATP13A1Q9HD20 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
ATP13A1Q9HD20 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
ATP13A1Q9HD20 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
ATP13A1Q9HD20 NRXN1-220ENST00000611589 1857 ntTSL 5 BASIC18.23■□□□□ 0.51
ATP13A1Q9HD20 PITPNM2-209ENST00000546049 1793 ntTSL 5 BASIC18.23■□□□□ 0.51
ATP13A1Q9HD20 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
ATP13A1Q9HD20 SKIDA1-202ENST00000449193 6598 ntAPPRIS P2 TSL 3 BASIC18.23■□□□□ 0.51
ATP13A1Q9HD20 CDKN1C-201ENST00000380725 1220 ntAPPRIS ALT2 TSL 2 BASIC18.23■□□□□ 0.51
ATP13A1Q9HD20 TP53TG1-202ENST00000416560 710 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
ATP13A1Q9HD20 POM121L3P-201ENST00000419331 1163 ntBASIC18.23■□□□□ 0.51
ATP13A1Q9HD20 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
ATP13A1Q9HD20 SLC2A1-204ENST00000460369 541 ntTSL 2 BASIC18.23■□□□□ 0.51
ATP13A1Q9HD20 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC18.23■□□□□ 0.51
ATP13A1Q9HD20 COX18-204ENST00000507544 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC18.23■□□□□ 0.51
ATP13A1Q9HD20 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC18.23■□□□□ 0.51
ATP13A1Q9HD20 AC009533.2-201ENST00000543664 586 ntBASIC18.23■□□□□ 0.51
ATP13A1Q9HD20 AC005625.1-201ENST00000590304 472 ntTSL 3 BASIC18.23■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 33.9 ms