Protein–RNA interactions for Protein: Q9HBX3

SND1-IT1, Uncharacterized protein encoded by SND1-IT1, humanhuman

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-IT1Q9HBX3 PARP9-204ENST00000471785 3040 ntAPPRIS ALT2 TSL 2 BASIC11.97□□□□□ -0.49
SND1-IT1Q9HBX3 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
SND1-IT1Q9HBX3 GRAMD1A-211ENST00000599564 2825 ntTSL 5 BASIC11.97□□□□□ -0.49
SND1-IT1Q9HBX3 SSFA2-202ENST00000409001 4987 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
SND1-IT1Q9HBX3 STK39-201ENST00000355999 3820 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
SND1-IT1Q9HBX3 C15orf52-202ENST00000397536 4717 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
SND1-IT1Q9HBX3 LITAF-209ENST00000571688 2632 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
SND1-IT1Q9HBX3 SLC12A2-208ENST00000628403 3617 ntAPPRIS ALT2 TSL 5 BASIC11.97□□□□□ -0.49
SND1-IT1Q9HBX3 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
SND1-IT1Q9HBX3 CPZ-203ENST00000382480 2538 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
SND1-IT1Q9HBX3 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC11.97□□□□□ -0.49
SND1-IT1Q9HBX3 ENDOV-225ENST00000522751 1475 ntTSL 5 BASIC11.97□□□□□ -0.49
SND1-IT1Q9HBX3 OPA1-201ENST00000361150 6330 ntTSL 5 BASIC11.97□□□□□ -0.49
SND1-IT1Q9HBX3 IL4I1-204ENST00000595948 2407 ntAPPRIS P4 TSL 1 (best) BASIC11.97□□□□□ -0.49
SND1-IT1Q9HBX3 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
SND1-IT1Q9HBX3 RBBP7-203ENST00000380087 2333 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
SND1-IT1Q9HBX3 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC11.97□□□□□ -0.49
SND1-IT1Q9HBX3 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC11.97□□□□□ -0.49
SND1-IT1Q9HBX3 AC131160.1-201ENST00000639401 3058 ntAPPRIS P1 TSL 5 BASIC11.97□□□□□ -0.49
SND1-IT1Q9HBX3 AIDA-201ENST00000340020 3008 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
SND1-IT1Q9HBX3 TNNC1-201ENST00000232975 714 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
SND1-IT1Q9HBX3 PIN1-201ENST00000247970 997 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
SND1-IT1Q9HBX3 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
SND1-IT1Q9HBX3 RPP25L-201ENST00000297613 1092 ntAPPRIS P1 TSL 2 BASIC11.97□□□□□ -0.49
SND1-IT1Q9HBX3 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC11.97□□□□□ -0.49
SND1-IT1Q9HBX3 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
SND1-IT1Q9HBX3 DUSP23-201ENST00000368107 756 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
SND1-IT1Q9HBX3 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC11.97□□□□□ -0.49
SND1-IT1Q9HBX3 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC11.97□□□□□ -0.49
SND1-IT1Q9HBX3 AP002982.1-201ENST00000492365 877 ntBASIC11.97□□□□□ -0.49
SND1-IT1Q9HBX3 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC11.97□□□□□ -0.49
SND1-IT1Q9HBX3 BCL2L10-202ENST00000561198 825 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
SND1-IT1Q9HBX3 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC11.97□□□□□ -0.49
SND1-IT1Q9HBX3 TMEM191B-201ENST00000612978 1220 ntAPPRIS P2 TSL 5 BASIC11.97□□□□□ -0.49
SND1-IT1Q9HBX3 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC11.97□□□□□ -0.49
SND1-IT1Q9HBX3 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC11.97□□□□□ -0.49
SND1-IT1Q9HBX3 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
SND1-IT1Q9HBX3 ATXN7-213ENST00000538065 6842 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
SND1-IT1Q9HBX3 TBC1D28-201ENST00000345096 2789 ntAPPRIS P1 TSL 2 BASIC11.97□□□□□ -0.49
SND1-IT1Q9HBX3 KRT23-201ENST00000209718 1987 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
SND1-IT1Q9HBX3 PEX6-202ENST00000304611 3478 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
SND1-IT1Q9HBX3 BATF2-202ENST00000435842 1949 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
SND1-IT1Q9HBX3 PABPC1L-201ENST00000217073 1851 ntAPPRIS P1 TSL 5 BASIC11.97□□□□□ -0.49
SND1-IT1Q9HBX3 TSKS-201ENST00000246801 1883 ntAPPRIS P2 TSL 1 (best) BASIC11.97□□□□□ -0.49
SND1-IT1Q9HBX3 GSPT1-202ENST00000434724 7105 ntAPPRIS P4 TSL 1 (best) BASIC11.97□□□□□ -0.49
SND1-IT1Q9HBX3 GUCA1A-201ENST00000053469 1874 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
SND1-IT1Q9HBX3 KIAA0319L-201ENST00000325722 4789 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
SND1-IT1Q9HBX3 PDIA5-201ENST00000316218 1799 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
SND1-IT1Q9HBX3 MFF-202ENST00000337110 1760 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
SND1-IT1Q9HBX3 IL12RB2-202ENST00000371000 2454 ntTSL 2 BASIC11.97□□□□□ -0.49
SND1-IT1Q9HBX3 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
SND1-IT1Q9HBX3 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC11.97□□□□□ -0.49
SND1-IT1Q9HBX3 ITGB2-AS1-202ENST00000441379 2282 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
SND1-IT1Q9HBX3 TSHZ1-204ENST00000580243 3582 ntAPPRIS P1 TSL 2 BASIC11.97□□□□□ -0.49
SND1-IT1Q9HBX3 RAB15-203ENST00000533601 3515 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
SND1-IT1Q9HBX3 AL138688.1-201ENST00000624851 1594 ntBASIC11.96□□□□□ -0.49
SND1-IT1Q9HBX3 WIPF2-210ENST00000585043 2693 ntAPPRIS P2 TSL 1 (best) BASIC11.96□□□□□ -0.49
SND1-IT1Q9HBX3 CDK4-201ENST00000257904 2076 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
SND1-IT1Q9HBX3 CNTNAP3-205ENST00000377659 2649 ntTSL 2 BASIC11.96□□□□□ -0.49
SND1-IT1Q9HBX3 LMAN1-201ENST00000251047 5521 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
SND1-IT1Q9HBX3 ACAT2-201ENST00000367048 3180 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
SND1-IT1Q9HBX3 AKAP12-201ENST00000253332 6597 ntAPPRIS P4 TSL 1 (best) BASIC11.96□□□□□ -0.49
SND1-IT1Q9HBX3 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC11.96□□□□□ -0.49
SND1-IT1Q9HBX3 SPRYD7-202ENST00000378195 3086 ntTSL 2 BASIC11.96□□□□□ -0.49
SND1-IT1Q9HBX3 WIPF1-201ENST00000272746 3028 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.49
SND1-IT1Q9HBX3 SLC10A3-203ENST00000393586 1893 ntTSL 5 BASIC11.96□□□□□ -0.49
SND1-IT1Q9HBX3 USP2-202ENST00000455332 2903 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
SND1-IT1Q9HBX3 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC11.96□□□□□ -0.49
SND1-IT1Q9HBX3 BMI1-201ENST00000376663 3428 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
SND1-IT1Q9HBX3 EPB41L3-204ENST00000540638 3370 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.49
SND1-IT1Q9HBX3 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
SND1-IT1Q9HBX3 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
SND1-IT1Q9HBX3 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
SND1-IT1Q9HBX3 RALGPS1-206ENST00000394011 819 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
SND1-IT1Q9HBX3 GAS7-202ENST00000396115 929 ntTSL 5 BASIC11.96□□□□□ -0.49
SND1-IT1Q9HBX3 PPP1R14BP5-201ENST00000440334 435 ntBASIC11.96□□□□□ -0.49
SND1-IT1Q9HBX3 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC11.96□□□□□ -0.49
SND1-IT1Q9HBX3 AC233263.1-201ENST00000578059 224 ntBASIC11.96□□□□□ -0.49
SND1-IT1Q9HBX3 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC11.96□□□□□ -0.49
SND1-IT1Q9HBX3 AC011298.2-201ENST00000617989 482 ntBASIC11.96□□□□□ -0.49
SND1-IT1Q9HBX3 TSC22D3-203ENST00000372383 2266 ntTSL 2 BASIC11.96□□□□□ -0.49
SND1-IT1Q9HBX3 PTPRF-201ENST00000359947 7727 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
SND1-IT1Q9HBX3 PMS1-213ENST00000441310 3225 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
SND1-IT1Q9HBX3 GRB7-201ENST00000309156 2243 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
SND1-IT1Q9HBX3 ETV4-211ENST00000591713 1727 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
SND1-IT1Q9HBX3 MAPK8IP1-202ENST00000395629 3180 ntTSL 5 BASIC11.96□□□□□ -0.5
SND1-IT1Q9HBX3 GBA2-203ENST00000378103 3611 ntAPPRIS P3 TSL 1 (best) BASIC11.96□□□□□ -0.5
SND1-IT1Q9HBX3 SIPA1-201ENST00000394224 3628 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
SND1-IT1Q9HBX3 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
SND1-IT1Q9HBX3 DPP9-AS1-201ENST00000381796 3071 ntTSL 2 BASIC11.96□□□□□ -0.5
SND1-IT1Q9HBX3 SLC22A11-203ENST00000377585 2124 ntTSL 2 BASIC11.96□□□□□ -0.5
SND1-IT1Q9HBX3 UGP2-202ENST00000394417 2136 ntTSL 1 (best) BASIC11.96□□□□□ -0.5
SND1-IT1Q9HBX3 AC046158.3-201ENST00000624947 2558 ntBASIC11.96□□□□□ -0.5
SND1-IT1Q9HBX3 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC11.96□□□□□ -0.5
SND1-IT1Q9HBX3 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC11.96□□□□□ -0.5
SND1-IT1Q9HBX3 ZAP70-201ENST00000264972 2437 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
SND1-IT1Q9HBX3 LINC00200-201ENST00000425630 2434 ntTSL 1 (best) BASIC11.96□□□□□ -0.5
SND1-IT1Q9HBX3 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC11.96□□□□□ -0.5
SND1-IT1Q9HBX3 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
SND1-IT1Q9HBX3 PSMD8-210ENST00000620216 1538 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Retrieved 100 of 98,524 protein–RNA pairs in 32 ms