Protein–RNA interactions for Protein: Q9BYR6

KRTAP3-3, Keratin-associated protein 3-3, humanhuman

Predictions only

Length 98 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP3-3Q9BYR6 AL360295.1-201ENST00000425435 1824 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
KRTAP3-3Q9BYR6 LINC01970-201ENST00000581489 1810 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
KRTAP3-3Q9BYR6 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC11.16□□□□□ -0.62
KRTAP3-3Q9BYR6 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
KRTAP3-3Q9BYR6 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
KRTAP3-3Q9BYR6 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
KRTAP3-3Q9BYR6 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
KRTAP3-3Q9BYR6 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
KRTAP3-3Q9BYR6 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
KRTAP3-3Q9BYR6 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
KRTAP3-3Q9BYR6 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC11.15□□□□□ -0.62
KRTAP3-3Q9BYR6 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
KRTAP3-3Q9BYR6 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
KRTAP3-3Q9BYR6 AMD1P4-201ENST00000299540 1345 ntBASIC11.15□□□□□ -0.62
KRTAP3-3Q9BYR6 CRYM-AS1-201ENST00000338573 1661 ntTSL 2 BASIC11.15□□□□□ -0.62
KRTAP3-3Q9BYR6 BCL7B-202ENST00000411832 1458 ntTSL 2 BASIC11.15□□□□□ -0.62
KRTAP3-3Q9BYR6 FUNDC2P3-201ENST00000334716 533 ntBASIC11.15□□□□□ -0.62
KRTAP3-3Q9BYR6 LAIR2-202ENST00000351841 538 ntAPPRIS ALT2 TSL 1 (best) BASIC11.15□□□□□ -0.62
KRTAP3-3Q9BYR6 FCER1A-201ENST00000368114 765 ntTSL 3 BASIC11.15□□□□□ -0.62
KRTAP3-3Q9BYR6 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
KRTAP3-3Q9BYR6 KRTAP2-3-201ENST00000391418 875 ntAPPRIS P1 BASIC11.15□□□□□ -0.62
KRTAP3-3Q9BYR6 LYPD6B-204ENST00000409876 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC11.15□□□□□ -0.62
KRTAP3-3Q9BYR6 IGF1-205ENST00000424202 612 ntAPPRIS ALT1 TSL 1 (best) BASIC11.15□□□□□ -0.62
KRTAP3-3Q9BYR6 AC078845.1-202ENST00000435996 733 ntTSL 3 BASIC11.15□□□□□ -0.62
KRTAP3-3Q9BYR6 GCSAM-202ENST00000460387 623 ntTSL 3 BASIC11.15□□□□□ -0.62
KRTAP3-3Q9BYR6 AC092944.1-203ENST00000488040 567 ntTSL 4 BASIC11.15□□□□□ -0.62
KRTAP3-3Q9BYR6 NMU-202ENST00000505262 693 ntTSL 3 BASIC11.15□□□□□ -0.62
KRTAP3-3Q9BYR6 PTGES3P3-201ENST00000511479 482 ntBASIC11.15□□□□□ -0.62
KRTAP3-3Q9BYR6 C1GALT1P3-201ENST00000522049 819 ntBASIC11.15□□□□□ -0.62
KRTAP3-3Q9BYR6 AP000755.2-201ENST00000526777 571 ntTSL 5 BASIC11.15□□□□□ -0.62
KRTAP3-3Q9BYR6 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC11.15□□□□□ -0.62
KRTAP3-3Q9BYR6 RAB3IP-214ENST00000550847 670 ntTSL 3 BASIC11.15□□□□□ -0.62
KRTAP3-3Q9BYR6 NPAS3-209ENST00000551008 1002 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
KRTAP3-3Q9BYR6 AC018946.1-201ENST00000560578 458 ntTSL 5 BASIC11.15□□□□□ -0.62
KRTAP3-3Q9BYR6 AC092123.1-201ENST00000565623 871 ntTSL 2 BASIC11.15□□□□□ -0.62
KRTAP3-3Q9BYR6 AC106730.2-201ENST00000566641 540 ntBASIC11.15□□□□□ -0.62
KRTAP3-3Q9BYR6 SSSCA1-AS1-201ENST00000567594 614 ntBASIC11.15□□□□□ -0.62
KRTAP3-3Q9BYR6 ULK4P3-205ENST00000568486 1158 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
KRTAP3-3Q9BYR6 AC023043.1-201ENST00000568654 609 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
KRTAP3-3Q9BYR6 AC020779.2-201ENST00000568984 393 ntTSL 3 BASIC11.15□□□□□ -0.62
KRTAP3-3Q9BYR6 AC004233.1-201ENST00000570515 608 ntTSL 4 BASIC11.15□□□□□ -0.62
KRTAP3-3Q9BYR6 AC009121.2-201ENST00000572913 714 ntTSL 3 BASIC11.15□□□□□ -0.62
KRTAP3-3Q9BYR6 AP001025.3-201ENST00000578787 864 ntTSL 3 BASIC11.15□□□□□ -0.62
KRTAP3-3Q9BYR6 IFT20-209ENST00000579419 787 ntAPPRIS ALT1 TSL 3 BASIC11.15□□□□□ -0.62
KRTAP3-3Q9BYR6 AC087399.1-201ENST00000579769 573 ntTSL 4 BASIC11.15□□□□□ -0.62
KRTAP3-3Q9BYR6 ZNF180-204ENST00000586637 1023 ntTSL 5 BASIC11.15□□□□□ -0.62
KRTAP3-3Q9BYR6 YTHDF3-AS1-201ENST00000603538 718 ntBASIC11.15□□□□□ -0.62
KRTAP3-3Q9BYR6 AL391597.2-201ENST00000635698 479 ntTSL 5 BASIC11.15□□□□□ -0.62
KRTAP3-3Q9BYR6 AC103706.2-201ENST00000638080 240 ntBASIC11.15□□□□□ -0.62
KRTAP3-3Q9BYR6 AC099654.14-201ENST00000638599 341 ntBASIC11.15□□□□□ -0.62
KRTAP3-3Q9BYR6 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC11.15□□□□□ -0.62
KRTAP3-3Q9BYR6 MOGS-202ENST00000409065 2668 ntTSL 5 BASIC11.15□□□□□ -0.62
KRTAP3-3Q9BYR6 IL15-202ENST00000320650 1447 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
KRTAP3-3Q9BYR6 SERINC5-203ENST00000509193 1441 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
KRTAP3-3Q9BYR6 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
KRTAP3-3Q9BYR6 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC11.15□□□□□ -0.62
KRTAP3-3Q9BYR6 UBE2E3-202ENST00000410062 1570 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
KRTAP3-3Q9BYR6 PSMG3-202ENST00000288607 1391 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.63
KRTAP3-3Q9BYR6 IQCD-201ENST00000299732 1369 ntAPPRIS P3 TSL 1 (best) BASIC11.15□□□□□ -0.63
KRTAP3-3Q9BYR6 RPS6-204ENST00000380394 1387 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.63
KRTAP3-3Q9BYR6 AL391825.1-201ENST00000457671 1364 ntBASIC11.15□□□□□ -0.63
KRTAP3-3Q9BYR6 GGPS1-206ENST00000488594 1396 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.63
KRTAP3-3Q9BYR6 LINC02381-201ENST00000508564 1369 ntTSL 1 (best) BASIC11.15□□□□□ -0.63
KRTAP3-3Q9BYR6 TRIM53CP-201ENST00000531490 1354 ntBASIC11.15□□□□□ -0.63
KRTAP3-3Q9BYR6 OR4K1-203ENST00000641429 1358 ntAPPRIS P1 BASIC11.15□□□□□ -0.63
KRTAP3-3Q9BYR6 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC11.15□□□□□ -0.63
KRTAP3-3Q9BYR6 PAPD7-201ENST00000230859 5459 ntTSL 1 (best) BASIC11.15□□□□□ -0.63
KRTAP3-3Q9BYR6 WFDC1-201ENST00000219454 1534 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
KRTAP3-3Q9BYR6 AC130464.1-201ENST00000416201 1500 ntBASIC11.14□□□□□ -0.63
KRTAP3-3Q9BYR6 FBXO7-206ENST00000452138 1535 ntTSL 2 BASIC11.14□□□□□ -0.63
KRTAP3-3Q9BYR6 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC11.14□□□□□ -0.63
KRTAP3-3Q9BYR6 MTERF3-204ENST00000523821 1529 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
KRTAP3-3Q9BYR6 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
KRTAP3-3Q9BYR6 AL358216.1-201ENST00000451601 1657 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
KRTAP3-3Q9BYR6 ZNF736P9Y-201ENST00000439586 1345 ntBASIC11.14□□□□□ -0.63
KRTAP3-3Q9BYR6 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
KRTAP3-3Q9BYR6 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC11.14□□□□□ -0.63
KRTAP3-3Q9BYR6 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
KRTAP3-3Q9BYR6 UBXN8-201ENST00000265616 1450 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
KRTAP3-3Q9BYR6 MRPS31-201ENST00000323563 1462 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
KRTAP3-3Q9BYR6 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC11.14□□□□□ -0.63
KRTAP3-3Q9BYR6 ACAA1-219ENST00000625927 1760 ntTSL 5 BASIC11.14□□□□□ -0.63
KRTAP3-3Q9BYR6 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
KRTAP3-3Q9BYR6 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
KRTAP3-3Q9BYR6 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC11.14□□□□□ -0.63
KRTAP3-3Q9BYR6 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC11.14□□□□□ -0.63
KRTAP3-3Q9BYR6 SLC51B-201ENST00000334287 940 ntAPPRIS P1 TSL 2 BASIC11.14□□□□□ -0.63
KRTAP3-3Q9BYR6 ANAPC13-201ENST00000354910 1209 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
KRTAP3-3Q9BYR6 BCAS2-201ENST00000369541 1299 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
KRTAP3-3Q9BYR6 UBE2C-205ENST00000372568 914 ntTSL 2 BASIC11.14□□□□□ -0.63
KRTAP3-3Q9BYR6 UBD-203ENST00000377050 1087 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
KRTAP3-3Q9BYR6 PTRH2-201ENST00000393038 901 ntAPPRIS P3 TSL 1 (best) BASIC11.14□□□□□ -0.63
KRTAP3-3Q9BYR6 AL592295.1-201ENST00000400984 884 ntBASIC11.14□□□□□ -0.63
KRTAP3-3Q9BYR6 AL590004.1-201ENST00000405321 300 ntBASIC11.14□□□□□ -0.63
KRTAP3-3Q9BYR6 AL451046.1-201ENST00000406097 534 ntBASIC11.14□□□□□ -0.63
KRTAP3-3Q9BYR6 PTCHD3P2-201ENST00000424937 1205 ntBASIC11.14□□□□□ -0.63
KRTAP3-3Q9BYR6 PCDH9-AS1-201ENST00000430861 532 ntTSL 2 BASIC11.14□□□□□ -0.63
KRTAP3-3Q9BYR6 AL360091.3-201ENST00000442146 387 ntTSL 5 BASIC11.14□□□□□ -0.63
KRTAP3-3Q9BYR6 SPIN4-AS1-201ENST00000451979 426 ntTSL 2 BASIC11.14□□□□□ -0.63
KRTAP3-3Q9BYR6 NREP-209ENST00000455559 698 ntAPPRIS P1 TSL 4 BASIC11.14□□□□□ -0.63
Retrieved 100 of 98,524 protein–RNA pairs in 59.3 ms