RNA–Protein interactions for RNA: ENST00000578787.1

AP001025.3-201, humanhuman

TSL 3 BASIC

Gene AP001025.3, Length 864 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP001025.3-201ENST00000578787 AEBP2Q6ZN18 517 aaPredicted RBP25.25■■□□□ 1.63
AP001025.3-201ENST00000578787 CHIC1Q5VXU3 224 aa23.93■■□□□ 1.42
AP001025.3-201ENST00000578787 SENP3Q9H4L4 574 aaPredicted RBP21.42■■□□□ 1.02
AP001025.3-201ENST00000578787 PHF23Q9BUL5 403 aaPredicted RBP21.19■□□□□ 0.98
AP001025.3-201ENST00000578787 FOXD1Q16676 465 aa20.03■□□□□ 0.8
AP001025.3-201ENST00000578787 NISCHQ9Y2I1 1504 aa19.68■□□□□ 0.74
AP001025.3-201ENST00000578787 PLPPR3Q6T4P5 718 aa19.08■□□□□ 0.64
AP001025.3-201ENST00000578787 PPP6R1Q9UPN7 881 aa18.79■□□□□ 0.6
AP001025.3-201ENST00000578787 ADRA2BP18089 450 aa18.69■□□□□ 0.58
AP001025.3-201ENST00000578787 PIAS4Q8N2W9 510 aaPredicted RBP18.67■□□□□ 0.58
AP001025.3-201ENST00000578787 MSH5O43196 834 aa18.65■□□□□ 0.58
AP001025.3-201ENST00000578787 POTEDQ86YR6 584 aa18.25■□□□□ 0.51
AP001025.3-201ENST00000578787 CCDC180Q9P1Z9 1646 aa17.47■□□□□ 0.39
AP001025.3-201ENST00000578787 MAPK8IP2Q13387 824 aaPredicted RBP17.19■□□□□ 0.34
AP001025.3-201ENST00000578787 ABCC9O60706 1549 aa17.03■□□□□ 0.32
AP001025.3-201ENST00000578787 DMRT2Q9Y5R5 561 aa17.02■□□□□ 0.32
AP001025.3-201ENST00000578787 SCAF1Q9H7N4 1312 aaKnown RBP16.98■□□□□ 0.31
AP001025.3-201ENST00000578787 PPP4R3CPQ6ZMV5 832 aa16.76■□□□□ 0.27
AP001025.3-201ENST00000578787 DCAF8L2P0C7V8 631 aa16.44■□□□□ 0.22
AP001025.3-201ENST00000578787 HOXD11P31277 338 aaPredicted RBP16.42■□□□□ 0.22
AP001025.3-201ENST00000578787 CNKSR2Q8WXI2 1034 aa16.42■□□□□ 0.22
AP001025.3-201ENST00000578787 NACADO15069 1562 aa16.42■□□□□ 0.22
AP001025.3-201ENST00000578787 RB1CC1Q8TDY2 1594 aa16.42■□□□□ 0.22
AP001025.3-201ENST00000578787 ZCCHC6Q5VYS8 1495 aaKnown RBP16.41■□□□□ 0.22
AP001025.3-201ENST00000578787 MYO15BQ96JP2 1530 aa16.34■□□□□ 0.21
AP001025.3-201ENST00000578787 DCAF1Q9Y4B6 1507 aa16.29■□□□□ 0.2
AP001025.3-201ENST00000578787 RNF216Q9NWF9 866 aaPredicted RBP16.28■□□□□ 0.2
AP001025.3-201ENST00000578787 DCAF8L1A6NGE4 600 aa16.25■□□□□ 0.19
AP001025.3-201ENST00000578787 NCBP3Q53F19 620 aaKnown RBP16.04■□□□□ 0.16
AP001025.3-201ENST00000578787 UNC13AQ9UPW8 1703 aa16.04■□□□□ 0.16
AP001025.3-201ENST00000578787 CACNB1Q02641 598 aaPredicted RBP16■□□□□ 0.15
AP001025.3-201ENST00000578787 RNF39Q9H2S5 420 aa15.98■□□□□ 0.15
AP001025.3-201ENST00000578787 SCRIBQ14160 1630 aa15.94■□□□□ 0.14
AP001025.3-201ENST00000578787 PABPN1Q86U42 306 aaKnown RBP eCLIP15.93■□□□□ 0.14
AP001025.3-201ENST00000578787 BICRAQ9NZM4 1560 aa15.91■□□□□ 0.14
AP001025.3-201ENST00000578787 NPM3O75607 178 aaKnown RBP15.9■□□□□ 0.14
AP001025.3-201ENST00000578787 DNAJC5BQ9UF47 199 aa15.82■□□□□ 0.12
AP001025.3-201ENST00000578787 SHROOM4Q9ULL8 1493 aa15.76■□□□□ 0.11
AP001025.3-201ENST00000578787 C1QBPQ07021 282 aaKnown RBP15.7■□□□□ 0.1
AP001025.3-201ENST00000578787 KCNA4P22459 653 aa15.63■□□□□ 0.09
AP001025.3-201ENST00000578787 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.57■□□□□ 0.08
AP001025.3-201ENST00000578787 EIF4G1Q04637 1599 aaKnown RBP15.49■□□□□ 0.07
AP001025.3-201ENST00000578787 CC2D2AQ9P2K1 1620 aa15.41■□□□□ 0.06
AP001025.3-201ENST00000578787 U3KPZ7 1027 aaPredicted RBP15.33■□□□□ 0.04
AP001025.3-201ENST00000578787 CECR2Q9BXF3 1484 aa15.32■□□□□ 0.04
AP001025.3-201ENST00000578787 BAZ1AQ9NRL2 1556 aaPredicted RBP15.26■□□□□ 0.03
AP001025.3-201ENST00000578787 SMARCA4P51532 1647 aa15.25■□□□□ 0.03
AP001025.3-201ENST00000578787 SLC4A2P04920 1241 aa15.22■□□□□ 0.03
AP001025.3-201ENST00000578787 MROH2BQ7Z745 1585 aa15.16■□□□□ 0.02
AP001025.3-201ENST00000578787 ATAD2BQ9ULI0 1458 aa15.16■□□□□ 0.02
AP001025.3-201ENST00000578787 SMARCA2P51531 1590 aa15.15■□□□□ 0.02
AP001025.3-201ENST00000578787 NCAPD3P42695 1498 aa15.14■□□□□ 0.01
AP001025.3-201ENST00000578787 PEG3Q9GZU2 1588 aa15.11■□□□□ 0.01
AP001025.3-201ENST00000578787 SPINK5Q9NQ38 1064 aaPredicted RBP15.1■□□□□ 0.01
AP001025.3-201ENST00000578787 HMGXB3Q12766 1538 aa15.07■□□□□ 0
AP001025.3-201ENST00000578787 BAZ1BQ9UIG0 1483 aaKnown RBP15.04■□□□□ -0
AP001025.3-201ENST00000578787 RSF1Q96T23 1441 aaPredicted RBP15.01□□□□□ -0.01
AP001025.3-201ENST00000578787 WIZO95785 1651 aa15□□□□□ -0.01
AP001025.3-201ENST00000578787 CAPN15O75808 1086 aa15□□□□□ -0.01
AP001025.3-201ENST00000578787 DSG3P32926 999 aa14.97□□□□□ -0.01
AP001025.3-201ENST00000578787 TOP2AP11388 1531 aaKnown RBP14.85□□□□□ -0.03
AP001025.3-201ENST00000578787 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.78□□□□□ -0.04
AP001025.3-201ENST00000578787 TRHP20396 242 aaPredicted RBP14.78□□□□□ -0.04
AP001025.3-201ENST00000578787 HNRNPUL2Q1KMD3 747 aaKnown RBP14.78□□□□□ -0.04
AP001025.3-201ENST00000578787 NESP48681 1621 aa14.75□□□□□ -0.05
AP001025.3-201ENST00000578787 APLP2Q06481 763 aa14.75□□□□□ -0.05
AP001025.3-201ENST00000578787 LAMC3Q9Y6N6 1575 aa14.74□□□□□ -0.05
AP001025.3-201ENST00000578787 ZNF219Q9P2Y4 722 aaPredicted RBP14.73□□□□□ -0.05
AP001025.3-201ENST00000578787 SAMD1Q6SPF0 538 aaPredicted RBP14.72□□□□□ -0.05
AP001025.3-201ENST00000578787 CADPSQ9ULU8 1353 aa14.72□□□□□ -0.05
AP001025.3-201ENST00000578787 SUPT5HO00267 1087 aaKnown RBP14.7□□□□□ -0.06
AP001025.3-201ENST00000578787 ABCB7O75027 752 aa14.7□□□□□ -0.06
AP001025.3-201ENST00000578787 SLC4A1APQ9BWU0 796 aaKnown RBP14.7□□□□□ -0.06
AP001025.3-201ENST00000578787 ERCC6Q03468 1493 aa14.69□□□□□ -0.06
AP001025.3-201ENST00000578787 CCDC88BA6NC98 1476 aa14.68□□□□□ -0.06
AP001025.3-201ENST00000578787 MYCNP04198 464 aaPredicted RBP14.66□□□□□ -0.06
AP001025.3-201ENST00000578787 PDS5BQ9NTI5 1447 aa14.66□□□□□ -0.06
AP001025.3-201ENST00000578787 CFTRP13569 1480 aa14.63□□□□□ -0.07
AP001025.3-201ENST00000578787 KIF21AQ7Z4S6 1674 aa14.58□□□□□ -0.07
AP001025.3-201ENST00000578787 FANCD2Q9BXW9 1451 aa14.54□□□□□ -0.08
AP001025.3-201ENST00000578787 PRDM2Q13029 1718 aa14.53□□□□□ -0.08
AP001025.3-201ENST00000578787 FOXD4L1Q9NU39 408 aa14.53□□□□□ -0.08
AP001025.3-201ENST00000578787 CEP164Q9UPV0 1460 aa14.52□□□□□ -0.08
AP001025.3-201ENST00000578787 THOC2Q8NI27 1593 aaKnown RBP14.51□□□□□ -0.09
AP001025.3-201ENST00000578787 CUX2O14529 1486 aa14.51□□□□□ -0.09
AP001025.3-201ENST00000578787 MRC2Q9UBG0 1479 aa14.48□□□□□ -0.09
AP001025.3-201ENST00000578787 WDR62O43379 1518 aa14.42□□□□□ -0.1
AP001025.3-201ENST00000578787 ZBTB22O15209 634 aa14.42□□□□□ -0.1
AP001025.3-201ENST00000578787 ATF5Q9Y2D1 282 aaPredicted RBP14.42□□□□□ -0.1
AP001025.3-201ENST00000578787 POLA2Q14181 598 aa14.41□□□□□ -0.1
AP001025.3-201ENST00000578787 URB2Q14146 1524 aaKnown RBP14.38□□□□□ -0.11
AP001025.3-201ENST00000578787 ABCC8Q09428 1581 aa14.34□□□□□ -0.11
AP001025.3-201ENST00000578787 TOPBP1Q92547 1522 aa14.31□□□□□ -0.12
AP001025.3-201ENST00000578787 DNMBPQ6XZF7 1577 aa14.3□□□□□ -0.12
AP001025.3-201ENST00000578787 POTEHQ6S545 545 aa14.29□□□□□ -0.12
AP001025.3-201ENST00000578787 CUX1P39880 1505 aa14.22□□□□□ -0.13
AP001025.3-201ENST00000578787 IFT140Q96RY7 1462 aa14.21□□□□□ -0.13
AP001025.3-201ENST00000578787 POLA1P09884 1462 aaPredicted RBP14.19□□□□□ -0.14
AP001025.3-201ENST00000578787 RBM42Q9BTD8 480 aaKnown RBP14.19□□□□□ -0.14
AP001025.3-201ENST00000578787 FGD5Q6ZNL6 1462 aa14.17□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms