Protein–RNA interactions for Protein: Q96PC3

AP1S3, AP-1 complex subunit sigma-3, humanhuman

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S3Q96PC3 REPS1-202ENST00000367663 2607 ntAPPRIS ALT1 TSL 5 BASIC13.5□□□□□ -0.25
AP1S3Q96PC3 SOAT1-203ENST00000539888 6794 ntTSL 2 BASIC13.5□□□□□ -0.25
AP1S3Q96PC3 DCAF12L2-201ENST00000360028 2599 ntAPPRIS P1 BASIC13.5□□□□□ -0.25
AP1S3Q96PC3 RBCK1-215ENST00000640614 2599 ntTSL 5 BASIC13.5□□□□□ -0.25
AP1S3Q96PC3 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC13.5□□□□□ -0.25
AP1S3Q96PC3 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
AP1S3Q96PC3 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
AP1S3Q96PC3 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
AP1S3Q96PC3 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC13.5□□□□□ -0.25
AP1S3Q96PC3 VARS2-212ENST00000542001 4064 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
AP1S3Q96PC3 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
AP1S3Q96PC3 KLF10-201ENST00000285407 3097 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
AP1S3Q96PC3 EIF4G3-204ENST00000374935 5567 ntAPPRIS ALT2 TSL 5 BASIC13.5□□□□□ -0.25
AP1S3Q96PC3 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC13.5□□□□□ -0.25
AP1S3Q96PC3 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC13.5□□□□□ -0.25
AP1S3Q96PC3 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
AP1S3Q96PC3 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
AP1S3Q96PC3 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC13.5□□□□□ -0.25
AP1S3Q96PC3 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC13.5□□□□□ -0.25
AP1S3Q96PC3 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC13.5□□□□□ -0.25
AP1S3Q96PC3 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC13.5□□□□□ -0.25
AP1S3Q96PC3 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
AP1S3Q96PC3 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
AP1S3Q96PC3 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
AP1S3Q96PC3 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
AP1S3Q96PC3 VPS53-216ENST00000574029 585 ntTSL 4 BASIC13.5□□□□□ -0.25
AP1S3Q96PC3 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC13.5□□□□□ -0.25
AP1S3Q96PC3 COL4A3BP-204ENST00000405807 2843 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
AP1S3Q96PC3 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC13.5□□□□□ -0.25
AP1S3Q96PC3 C3orf18-201ENST00000357203 2655 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
AP1S3Q96PC3 STK40-201ENST00000359297 4837 ntTSL 2 BASIC13.5□□□□□ -0.25
AP1S3Q96PC3 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC13.5□□□□□ -0.25
AP1S3Q96PC3 AC138028.4-201ENST00000564984 1845 ntBASIC13.5□□□□□ -0.25
AP1S3Q96PC3 STXBP3-201ENST00000370008 2478 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
AP1S3Q96PC3 DISP3-201ENST00000294484 5215 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
AP1S3Q96PC3 ARHGEF7-204ENST00000375736 5032 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
AP1S3Q96PC3 AC012317.2-201ENST00000623305 2251 ntBASIC13.5□□□□□ -0.25
AP1S3Q96PC3 TRIM7-203ENST00000393315 2851 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
AP1S3Q96PC3 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
AP1S3Q96PC3 ACAA1-209ENST00000450296 1570 ntTSL 5 BASIC13.49□□□□□ -0.25
AP1S3Q96PC3 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC13.49□□□□□ -0.25
AP1S3Q96PC3 NFATC4-222ENST00000555590 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
AP1S3Q96PC3 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC13.49□□□□□ -0.25
AP1S3Q96PC3 LINC00896-202ENST00000609602 2128 ntBASIC13.49□□□□□ -0.25
AP1S3Q96PC3 LRP11-201ENST00000239367 3260 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
AP1S3Q96PC3 KRT79-201ENST00000330553 2068 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
AP1S3Q96PC3 KRT8P3-201ENST00000519669 1449 ntBASIC13.49□□□□□ -0.25
AP1S3Q96PC3 ANK1-205ENST00000347528 8237 ntAPPRIS P4 TSL 1 (best) BASIC13.49□□□□□ -0.25
AP1S3Q96PC3 PIK3CG-201ENST00000359195 5377 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
AP1S3Q96PC3 ADAM11-203ENST00000535346 2529 ntTSL 2 BASIC13.49□□□□□ -0.25
AP1S3Q96PC3 VAC14-201ENST00000261776 3099 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
AP1S3Q96PC3 KRAS-202ENST00000311936 5765 ntAPPRIS ALT1 TSL 1 (best) BASIC13.49□□□□□ -0.25
AP1S3Q96PC3 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC13.49□□□□□ -0.25
AP1S3Q96PC3 LINC01502-201ENST00000445997 2471 ntTSL 2 BASIC13.49□□□□□ -0.25
AP1S3Q96PC3 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC13.49□□□□□ -0.25
AP1S3Q96PC3 ZMYM3-203ENST00000373981 1841 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
AP1S3Q96PC3 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
AP1S3Q96PC3 CLPTM1-203ENST00000546079 2342 ntTSL 2 BASIC13.49□□□□□ -0.25
AP1S3Q96PC3 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
AP1S3Q96PC3 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC13.49□□□□□ -0.25
AP1S3Q96PC3 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
AP1S3Q96PC3 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC13.49□□□□□ -0.25
AP1S3Q96PC3 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC13.49□□□□□ -0.25
AP1S3Q96PC3 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC13.49□□□□□ -0.25
AP1S3Q96PC3 POM121L13P-201ENST00000422362 380 ntBASIC13.49□□□□□ -0.25
AP1S3Q96PC3 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
AP1S3Q96PC3 TSPY6P-201ENST00000448518 926 ntBASIC13.49□□□□□ -0.25
AP1S3Q96PC3 GLRB-205ENST00000512619 728 ntTSL 3 BASIC13.49□□□□□ -0.25
AP1S3Q96PC3 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC13.49□□□□□ -0.25
AP1S3Q96PC3 KLF2-202ENST00000592003 564 ntTSL 3 BASIC13.49□□□□□ -0.25
AP1S3Q96PC3 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC13.49□□□□□ -0.25
AP1S3Q96PC3 KIAA0513-202ENST00000538274 7381 ntTSL 2 BASIC13.49□□□□□ -0.25
AP1S3Q96PC3 PAK4-202ENST00000358301 2739 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
AP1S3Q96PC3 AC134043.2-201ENST00000624206 2238 ntBASIC13.49□□□□□ -0.25
AP1S3Q96PC3 STIM2-212ENST00000639640 2241 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
AP1S3Q96PC3 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC13.49□□□□□ -0.25
AP1S3Q96PC3 GRAMD1C-201ENST00000358160 4177 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
AP1S3Q96PC3 CYP4F3-201ENST00000221307 5050 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
AP1S3Q96PC3 ATP2B1-AS1-201ENST00000605386 3632 ntBASIC13.49□□□□□ -0.25
AP1S3Q96PC3 CD24-201ENST00000606017 2180 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
AP1S3Q96PC3 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
AP1S3Q96PC3 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
AP1S3Q96PC3 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
AP1S3Q96PC3 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC13.49□□□□□ -0.25
AP1S3Q96PC3 GRM1-204ENST00000492807 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
AP1S3Q96PC3 EIF4H-202ENST00000353999 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC13.49□□□□□ -0.25
AP1S3Q96PC3 CPZ-203ENST00000382480 2538 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
AP1S3Q96PC3 C15orf61-201ENST00000342683 4253 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
AP1S3Q96PC3 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
AP1S3Q96PC3 ZBTB32-201ENST00000262630 1960 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
AP1S3Q96PC3 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC13.49□□□□□ -0.25
AP1S3Q96PC3 TERT-202ENST00000334602 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
AP1S3Q96PC3 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
AP1S3Q96PC3 EPHB4-201ENST00000358173 4329 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
AP1S3Q96PC3 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
AP1S3Q96PC3 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC13.48□□□□□ -0.25
AP1S3Q96PC3 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
AP1S3Q96PC3 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
AP1S3Q96PC3 TRIM15-207ENST00000376694 2214 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
AP1S3Q96PC3 HMBOX1-212ENST00000558662 1765 ntTSL 5 BASIC13.48□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 51 ms