Protein–RNA interactions for Protein: Q96EP0

RNF31, E3 ubiquitin-protein ligase RNF31, humanhuman

Predictions only

Length 1,072 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF31Q96EP0 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC17.2■□□□□ 0.34
RNF31Q96EP0 B4GALT2-202ENST00000356836 2629 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
RNF31Q96EP0 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
RNF31Q96EP0 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
RNF31Q96EP0 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC17.19■□□□□ 0.34
RNF31Q96EP0 POM121C-208ENST00000615331 5835 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
RNF31Q96EP0 FZR1-202ENST00000395095 1491 ntAPPRIS ALT1 TSL 1 (best) BASIC17.19■□□□□ 0.34
RNF31Q96EP0 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
RNF31Q96EP0 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC17.19■□□□□ 0.34
RNF31Q96EP0 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
RNF31Q96EP0 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
RNF31Q96EP0 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
RNF31Q96EP0 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
RNF31Q96EP0 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC17.19■□□□□ 0.34
RNF31Q96EP0 SLC5A10-204ENST00000395647 2140 ntTSL 2 BASIC17.19■□□□□ 0.34
RNF31Q96EP0 CRELD2-202ENST00000403427 1242 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
RNF31Q96EP0 AC132008.2-207ENST00000454517 770 ntBASIC17.19■□□□□ 0.34
RNF31Q96EP0 TMEM218-203ENST00000526175 972 ntAPPRIS P1 TSL 3 BASIC17.19■□□□□ 0.34
RNF31Q96EP0 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
RNF31Q96EP0 TMEM25-225ENST00000533102 1410 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
RNF31Q96EP0 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
RNF31Q96EP0 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
RNF31Q96EP0 ITGB4-201ENST00000200181 5919 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
RNF31Q96EP0 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
RNF31Q96EP0 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC17.19■□□□□ 0.34
RNF31Q96EP0 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
RNF31Q96EP0 MGLL-204ENST00000434178 4941 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
RNF31Q96EP0 TPSD1-201ENST00000211076 1499 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
RNF31Q96EP0 LRRC29-201ENST00000393992 1468 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
RNF31Q96EP0 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
RNF31Q96EP0 PCDHA5-202ENST00000529859 5218 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
RNF31Q96EP0 TBX20-201ENST00000408931 1871 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
RNF31Q96EP0 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
RNF31Q96EP0 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
RNF31Q96EP0 HEG1-201ENST00000311127 9156 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
RNF31Q96EP0 ZNF512B-201ENST00000369888 5919 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
RNF31Q96EP0 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
RNF31Q96EP0 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
RNF31Q96EP0 OGFOD2-211ENST00000538628 1696 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
RNF31Q96EP0 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
RNF31Q96EP0 LCE1F-201ENST00000334371 357 ntAPPRIS P1 BASIC17.18■□□□□ 0.34
RNF31Q96EP0 PRSS38-201ENST00000366757 1267 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
RNF31Q96EP0 TCEAL2-202ENST00000372780 1100 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
RNF31Q96EP0 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC17.18■□□□□ 0.34
RNF31Q96EP0 PRSS42-201ENST00000429665 882 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
RNF31Q96EP0 TM4SF19-TCTEX1D2-201ENST00000442633 964 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
RNF31Q96EP0 AL137026.1-202ENST00000452578 1089 ntTSL 2 BASIC17.18■□□□□ 0.34
RNF31Q96EP0 SAPCD2P3-201ENST00000455031 850 ntBASIC17.18■□□□□ 0.34
RNF31Q96EP0 RPP14-206ENST00000466547 805 ntAPPRIS P1 TSL 3 BASIC17.18■□□□□ 0.34
RNF31Q96EP0 AC008610.1-201ENST00000504573 393 ntTSL 2 BASIC17.18■□□□□ 0.34
RNF31Q96EP0 MIR5100-201ENST00000579544 119 ntBASIC17.18■□□□□ 0.34
RNF31Q96EP0 CHMP4A-211ENST00000609024 735 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
RNF31Q96EP0 REXO1L6P-202ENST00000619970 1078 ntBASIC17.18■□□□□ 0.34
RNF31Q96EP0 TJP1-212ENST00000614355 6977 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
RNF31Q96EP0 C16orf89-202ENST00000472572 1444 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
RNF31Q96EP0 AC112777.1-201ENST00000540175 1423 ntBASIC17.18■□□□□ 0.34
RNF31Q96EP0 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC17.18■□□□□ 0.34
RNF31Q96EP0 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
RNF31Q96EP0 MAZ-212ENST00000568282 1593 ntTSL 5 BASIC17.18■□□□□ 0.34
RNF31Q96EP0 OR6D1P-202ENST00000641007 5290 ntBASIC17.18■□□□□ 0.34
RNF31Q96EP0 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
RNF31Q96EP0 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
RNF31Q96EP0 HLA-A-201ENST00000376802 1334 ntBASIC17.18■□□□□ 0.34
RNF31Q96EP0 PLCH2-203ENST00000378486 4837 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
RNF31Q96EP0 PLCH2-204ENST00000419816 4837 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
RNF31Q96EP0 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
RNF31Q96EP0 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
RNF31Q96EP0 FBXW11-202ENST00000296933 4539 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
RNF31Q96EP0 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC17.17■□□□□ 0.34
RNF31Q96EP0 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC17.17■□□□□ 0.34
RNF31Q96EP0 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
RNF31Q96EP0 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
RNF31Q96EP0 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
RNF31Q96EP0 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
RNF31Q96EP0 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
RNF31Q96EP0 CLYBL-203ENST00000376355 6771 ntAPPRIS P1 TSL 2 BASIC17.17■□□□□ 0.34
RNF31Q96EP0 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
RNF31Q96EP0 PRMT2-201ENST00000291705 1011 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
RNF31Q96EP0 C6orf132-201ENST00000341865 6210 ntAPPRIS P2 TSL 5 BASIC17.17■□□□□ 0.34
RNF31Q96EP0 PPA2-202ENST00000348706 1414 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
RNF31Q96EP0 MAL-203ENST00000353004 873 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
RNF31Q96EP0 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
RNF31Q96EP0 RAB24-204ENST00000393611 1236 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
RNF31Q96EP0 PAX3-208ENST00000409828 1254 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
RNF31Q96EP0 AC068472.1-201ENST00000474589 881 ntBASIC17.17■□□□□ 0.34
RNF31Q96EP0 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC17.17■□□□□ 0.34
RNF31Q96EP0 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
RNF31Q96EP0 AC084125.4-201ENST00000580385 338 ntTSL 3 BASIC17.17■□□□□ 0.34
RNF31Q96EP0 AC016590.1-204ENST00000586442 813 ntTSL 5 BASIC17.17■□□□□ 0.34
RNF31Q96EP0 AC012615.3-201ENST00000592884 500 ntTSL 3 BASIC17.17■□□□□ 0.34
RNF31Q96EP0 AL049840.3-201ENST00000602669 611 ntBASIC17.17■□□□□ 0.34
RNF31Q96EP0 MUC1-224ENST00000611577 1023 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
RNF31Q96EP0 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
RNF31Q96EP0 MALT1-202ENST00000348428 9368 ntAPPRIS P4 TSL 1 (best) BASIC17.17■□□□□ 0.34
RNF31Q96EP0 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC17.17■□□□□ 0.34
RNF31Q96EP0 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
RNF31Q96EP0 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
RNF31Q96EP0 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
RNF31Q96EP0 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
RNF31Q96EP0 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 41 ms