Protein–RNA interactions for Protein: Q8N6Y1

PCDH20, Protocadherin-20, humanhuman

Known RBP Predictions only

Length 951 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH20Q8N6Y1 AHCYL2-201ENST00000325006 5056 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
PCDH20Q8N6Y1 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
PCDH20Q8N6Y1 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
PCDH20Q8N6Y1 CCS-201ENST00000310190 942 ntTSL 5 BASIC18.2■□□□□ 0.5
PCDH20Q8N6Y1 MEF2B-202ENST00000409447 1297 ntTSL 3 BASIC18.2■□□□□ 0.5
PCDH20Q8N6Y1 TSPY19P-201ENST00000418461 509 ntBASIC18.2■□□□□ 0.5
PCDH20Q8N6Y1 POM121L3P-201ENST00000419331 1163 ntBASIC18.2■□□□□ 0.5
PCDH20Q8N6Y1 TSPY18P-201ENST00000441642 509 ntBASIC18.2■□□□□ 0.5
PCDH20Q8N6Y1 BET1L-206ENST00000486280 665 ntTSL 3 BASIC18.2■□□□□ 0.5
PCDH20Q8N6Y1 PACRGL-218ENST00000507634 1142 ntTSL 5 BASIC18.2■□□□□ 0.5
PCDH20Q8N6Y1 NPM2-204ENST00000518119 1190 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
PCDH20Q8N6Y1 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC18.2■□□□□ 0.5
PCDH20Q8N6Y1 RAP1B-228ENST00000542145 1060 ntTSL 2 BASIC18.2■□□□□ 0.5
PCDH20Q8N6Y1 EFCAB11-211ENST00000556609 568 ntTSL 3 BASIC18.2■□□□□ 0.5
PCDH20Q8N6Y1 AC013356.2-201ENST00000559730 729 ntTSL 3 BASIC18.2■□□□□ 0.5
PCDH20Q8N6Y1 AC005336.2-201ENST00000593183 939 ntBASIC18.2■□□□□ 0.5
PCDH20Q8N6Y1 AC138894.3-201ENST00000603787 634 ntBASIC18.2■□□□□ 0.5
PCDH20Q8N6Y1 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
PCDH20Q8N6Y1 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
PCDH20Q8N6Y1 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
PCDH20Q8N6Y1 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC18.2■□□□□ 0.5
PCDH20Q8N6Y1 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
PCDH20Q8N6Y1 GOLGA6L10-207ENST00000610657 1705 ntAPPRIS P2 TSL 2 BASIC18.2■□□□□ 0.5
PCDH20Q8N6Y1 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
PCDH20Q8N6Y1 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
PCDH20Q8N6Y1 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
PCDH20Q8N6Y1 FZR1-202ENST00000395095 1491 ntAPPRIS ALT1 TSL 1 (best) BASIC18.2■□□□□ 0.5
PCDH20Q8N6Y1 LEXM-201ENST00000358193 1777 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
PCDH20Q8N6Y1 SP100-208ENST00000427101 1922 ntTSL 2 BASIC18.19■□□□□ 0.5
PCDH20Q8N6Y1 PDE1C-206ENST00000396193 5109 ntAPPRIS P4 TSL 2 BASIC18.19■□□□□ 0.5
PCDH20Q8N6Y1 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
PCDH20Q8N6Y1 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
PCDH20Q8N6Y1 MEN1-203ENST00000337652 3162 ntAPPRIS P3 TSL 5 BASIC18.19■□□□□ 0.5
PCDH20Q8N6Y1 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
PCDH20Q8N6Y1 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
PCDH20Q8N6Y1 RBFA-202ENST00000306735 1407 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
PCDH20Q8N6Y1 C18orf32-201ENST00000318240 1128 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
PCDH20Q8N6Y1 CKLF-202ENST00000345436 571 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
PCDH20Q8N6Y1 PSMB8-202ENST00000374882 1124 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
PCDH20Q8N6Y1 CLDN7-202ENST00000397317 1228 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
PCDH20Q8N6Y1 KMT5B-205ENST00000402789 1599 ntTSL 5 BASIC18.19■□□□□ 0.5
PCDH20Q8N6Y1 SEC61G-203ENST00000415949 732 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
PCDH20Q8N6Y1 SBDSP1-202ENST00000423945 618 ntTSL 3 BASIC18.19■□□□□ 0.5
PCDH20Q8N6Y1 AL596442.1-201ENST00000429305 429 ntTSL 2 BASIC18.19■□□□□ 0.5
PCDH20Q8N6Y1 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
PCDH20Q8N6Y1 SLC2A1-204ENST00000460369 541 ntTSL 2 BASIC18.19■□□□□ 0.5
PCDH20Q8N6Y1 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC18.19■□□□□ 0.5
PCDH20Q8N6Y1 COX18-204ENST00000507544 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC18.19■□□□□ 0.5
PCDH20Q8N6Y1 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
PCDH20Q8N6Y1 AC111152.3-201ENST00000569699 673 ntBASIC18.19■□□□□ 0.5
PCDH20Q8N6Y1 TBCB-205ENST00000585746 875 ntTSL 3 BASIC18.19■□□□□ 0.5
PCDH20Q8N6Y1 AL691432.3-201ENST00000621860 400 ntBASIC18.19■□□□□ 0.5
PCDH20Q8N6Y1 CCNC-219ENST00000627680 896 ntTSL 5 BASIC18.19■□□□□ 0.5
PCDH20Q8N6Y1 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
PCDH20Q8N6Y1 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
PCDH20Q8N6Y1 N4BP3-201ENST00000274605 6080 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
PCDH20Q8N6Y1 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC18.19■□□□□ 0.5
PCDH20Q8N6Y1 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
PCDH20Q8N6Y1 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC18.19■□□□□ 0.5
PCDH20Q8N6Y1 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
PCDH20Q8N6Y1 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC18.19■□□□□ 0.5
PCDH20Q8N6Y1 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
PCDH20Q8N6Y1 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC18.19■□□□□ 0.5
PCDH20Q8N6Y1 PODN-203ENST00000395871 2744 ntTSL 5 BASIC18.19■□□□□ 0.5
PCDH20Q8N6Y1 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC18.19■□□□□ 0.5
PCDH20Q8N6Y1 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
PCDH20Q8N6Y1 SPRED3-201ENST00000338502 4778 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
PCDH20Q8N6Y1 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
PCDH20Q8N6Y1 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
PCDH20Q8N6Y1 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
PCDH20Q8N6Y1 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC18.18■□□□□ 0.5
PCDH20Q8N6Y1 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC18.18■□□□□ 0.5
PCDH20Q8N6Y1 AQP8-201ENST00000219660 1359 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
PCDH20Q8N6Y1 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
PCDH20Q8N6Y1 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
PCDH20Q8N6Y1 GOLGA6L2-204ENST00000567107 3030 ntAPPRIS P2 TSL 5 BASIC18.18■□□□□ 0.5
PCDH20Q8N6Y1 PYCR1-217ENST00000629768 1740 ntTSL 5 BASIC18.18■□□□□ 0.5
PCDH20Q8N6Y1 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
PCDH20Q8N6Y1 SDCBP2-201ENST00000339987 1404 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
PCDH20Q8N6Y1 TRPV4-208ENST00000544971 2295 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
PCDH20Q8N6Y1 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
PCDH20Q8N6Y1 LCE1D-201ENST00000326233 430 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
PCDH20Q8N6Y1 HYI-201ENST00000372425 1265 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
PCDH20Q8N6Y1 KRT18P31-201ENST00000506277 1292 ntBASIC18.18■□□□□ 0.5
PCDH20Q8N6Y1 BARHL1-202ENST00000542090 1197 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
PCDH20Q8N6Y1 FICD-205ENST00000552758 603 ntTSL 2 BASIC18.18■□□□□ 0.5
PCDH20Q8N6Y1 AC091304.2-201ENST00000564639 760 ntBASIC18.18■□□□□ 0.5
PCDH20Q8N6Y1 FAM57A-205ENST00000572018 373 ntTSL 3 BASIC18.18■□□□□ 0.5
PCDH20Q8N6Y1 BIRC5-207ENST00000590449 568 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
PCDH20Q8N6Y1 BNIP3P18-201ENST00000593976 575 ntBASIC18.18■□□□□ 0.5
PCDH20Q8N6Y1 AL732314.6-201ENST00000627721 484 ntTSL 4 BASIC18.18■□□□□ 0.5
PCDH20Q8N6Y1 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
PCDH20Q8N6Y1 PDLIM7-202ENST00000355841 1689 ntAPPRIS P4 TSL 1 (best) BASIC18.18■□□□□ 0.5
PCDH20Q8N6Y1 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC18.18■□□□□ 0.5
PCDH20Q8N6Y1 FLYWCH1P1-201ENST00000460917 1874 ntBASIC18.18■□□□□ 0.5
PCDH20Q8N6Y1 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
PCDH20Q8N6Y1 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC18.17■□□□□ 0.5
PCDH20Q8N6Y1 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
PCDH20Q8N6Y1 VPS26A-202ENST00000373382 3229 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
PCDH20Q8N6Y1 TTLL8-201ENST00000266182 2505 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 18.3 ms