Protein–RNA interactions for Protein: Q8N3U4

STAG2, Cohesin subunit SA-2, humanhuman

Predictions only

Length 1,231 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
STAG2Q8N3U4 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC20.59■□□□□ 0.89
STAG2Q8N3U4 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC20.59■□□□□ 0.89
STAG2Q8N3U4 DCTN3-201ENST00000259632 808 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
STAG2Q8N3U4 AC004870.1-201ENST00000315132 882 ntBASIC20.59■□□□□ 0.89
STAG2Q8N3U4 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
STAG2Q8N3U4 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
STAG2Q8N3U4 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
STAG2Q8N3U4 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC20.59■□□□□ 0.89
STAG2Q8N3U4 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC20.59■□□□□ 0.89
STAG2Q8N3U4 TMEM218-203ENST00000526175 972 ntAPPRIS P1 TSL 3 BASIC20.59■□□□□ 0.89
STAG2Q8N3U4 AC135586.2-201ENST00000537262 567 ntAPPRIS P1 TSL 4 BASIC20.59■□□□□ 0.89
STAG2Q8N3U4 SPAG7-207ENST00000575142 1094 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
STAG2Q8N3U4 ATPAF2-213ENST00000585101 566 ntTSL 4 BASIC20.59■□□□□ 0.89
STAG2Q8N3U4 AC104692.2-201ENST00000603054 253 ntBASIC20.59■□□□□ 0.89
STAG2Q8N3U4 LINC00454-206ENST00000609861 841 ntTSL 5 BASIC20.59■□□□□ 0.89
STAG2Q8N3U4 LDHAL6A-203ENST00000615355 1042 ntTSL 5 BASIC20.59■□□□□ 0.89
STAG2Q8N3U4 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
STAG2Q8N3U4 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC20.59■□□□□ 0.89
STAG2Q8N3U4 CLEC10A-204ENST00000571664 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
STAG2Q8N3U4 STAP2-201ENST00000594605 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
STAG2Q8N3U4 GBGT1-203ENST00000372040 1980 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
STAG2Q8N3U4 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
STAG2Q8N3U4 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC20.59■□□□□ 0.89
STAG2Q8N3U4 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC20.59■□□□□ 0.89
STAG2Q8N3U4 CABP1-201ENST00000288616 1369 ntAPPRIS P4 TSL 1 (best) BASIC20.59■□□□□ 0.89
STAG2Q8N3U4 AC005329.3-201ENST00000626781 1366 ntTSL 5 BASIC20.59■□□□□ 0.89
STAG2Q8N3U4 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC20.58■□□□□ 0.89
STAG2Q8N3U4 AC008764.6-201ENST00000595909 2069 ntBASIC20.58■□□□□ 0.89
STAG2Q8N3U4 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC20.58■□□□□ 0.89
STAG2Q8N3U4 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC20.58■□□□□ 0.89
STAG2Q8N3U4 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC20.58■□□□□ 0.89
STAG2Q8N3U4 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
STAG2Q8N3U4 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC20.58■□□□□ 0.89
STAG2Q8N3U4 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
STAG2Q8N3U4 PCCB-207ENST00000466072 1844 ntAPPRIS ALT2 TSL 3 BASIC20.58■□□□□ 0.89
STAG2Q8N3U4 CACNG7-201ENST00000222212 1016 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
STAG2Q8N3U4 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.89
STAG2Q8N3U4 TPM4P1-201ENST00000436100 807 ntBASIC20.58■□□□□ 0.89
STAG2Q8N3U4 SAPCD2P3-201ENST00000455031 850 ntBASIC20.58■□□□□ 0.89
STAG2Q8N3U4 ACP6-203ENST00000487562 1258 ntTSL 5 BASIC20.58■□□□□ 0.89
STAG2Q8N3U4 CUTA-210ENST00000488034 769 ntAPPRIS ALT1 TSL 2 BASIC20.58■□□□□ 0.89
STAG2Q8N3U4 SMN1-203ENST00000503079 1219 ntTSL 5 BASIC20.58■□□□□ 0.89
STAG2Q8N3U4 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC20.58■□□□□ 0.89
STAG2Q8N3U4 COX5A-204ENST00000567270 579 ntTSL 3 BASIC20.58■□□□□ 0.89
STAG2Q8N3U4 TMED1-207ENST00000591695 809 ntTSL 5 BASIC20.58■□□□□ 0.89
STAG2Q8N3U4 LINC01711-201ENST00000598340 967 ntBASIC20.58■□□□□ 0.89
STAG2Q8N3U4 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
STAG2Q8N3U4 TNFAIP3-207ENST00000614035 1430 ntTSL 5 BASIC20.58■□□□□ 0.88
STAG2Q8N3U4 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.88
STAG2Q8N3U4 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
STAG2Q8N3U4 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC20.58■□□□□ 0.88
STAG2Q8N3U4 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC20.58■□□□□ 0.88
STAG2Q8N3U4 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC20.58■□□□□ 0.88
STAG2Q8N3U4 UBQLN4-201ENST00000368309 3576 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
STAG2Q8N3U4 C11orf80-203ENST00000525449 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
STAG2Q8N3U4 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
STAG2Q8N3U4 PANX1-202ENST00000436171 2750 ntAPPRIS ALT1 TSL 1 (best) BASIC20.57■□□□□ 0.88
STAG2Q8N3U4 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
STAG2Q8N3U4 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
STAG2Q8N3U4 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC20.57■□□□□ 0.88
STAG2Q8N3U4 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
STAG2Q8N3U4 MOAP1-201ENST00000298894 2441 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
STAG2Q8N3U4 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
STAG2Q8N3U4 PROK1-201ENST00000271331 1338 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
STAG2Q8N3U4 C2orf27B-201ENST00000623129 1325 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
STAG2Q8N3U4 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
STAG2Q8N3U4 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
STAG2Q8N3U4 HES1-201ENST00000232424 1578 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
STAG2Q8N3U4 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC20.57■□□□□ 0.88
STAG2Q8N3U4 AP2S1-202ENST00000352203 793 ntTSL 2 BASIC20.57■□□□□ 0.88
STAG2Q8N3U4 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
STAG2Q8N3U4 SUMF2-203ENST00000395435 1287 ntTSL 2 BASIC20.57■□□□□ 0.88
STAG2Q8N3U4 MPG-203ENST00000397817 1039 ntAPPRIS ALT2 TSL 2 BASIC20.57■□□□□ 0.88
STAG2Q8N3U4 DDX43P3-201ENST00000441064 443 ntBASIC20.57■□□□□ 0.88
STAG2Q8N3U4 RBSN-204ENST00000449050 903 ntTSL 2 BASIC20.57■□□□□ 0.88
STAG2Q8N3U4 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC20.57■□□□□ 0.88
STAG2Q8N3U4 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC20.57■□□□□ 0.88
STAG2Q8N3U4 AC080013.1-203ENST00000468242 720 ntTSL 5 BASIC20.57■□□□□ 0.88
STAG2Q8N3U4 AC080013.1-201ENST00000495318 566 ntTSL 4 BASIC20.57■□□□□ 0.88
STAG2Q8N3U4 AC122714.2-201ENST00000502787 707 ntBASIC20.57■□□□□ 0.88
STAG2Q8N3U4 ZBED5-AS1-202ENST00000529014 771 ntTSL 5 BASIC20.57■□□□□ 0.88
STAG2Q8N3U4 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC20.57■□□□□ 0.88
STAG2Q8N3U4 FGF11-204ENST00000575235 928 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
STAG2Q8N3U4 AP2S1-204ENST00000597020 707 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
STAG2Q8N3U4 AC116407.2-201ENST00000613639 860 ntBASIC20.57■□□□□ 0.88
STAG2Q8N3U4 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC20.57■□□□□ 0.88
STAG2Q8N3U4 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC20.57■□□□□ 0.88
STAG2Q8N3U4 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC20.57■□□□□ 0.88
STAG2Q8N3U4 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC20.57■□□□□ 0.88
STAG2Q8N3U4 FCGRT-201ENST00000221466 1798 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
STAG2Q8N3U4 FCER2-202ENST00000360067 1482 ntAPPRIS ALT2 TSL 5 BASIC20.56■□□□□ 0.88
STAG2Q8N3U4 NRBP1-204ENST00000379863 2174 ntTSL 5 BASIC20.56■□□□□ 0.88
STAG2Q8N3U4 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
STAG2Q8N3U4 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC20.56■□□□□ 0.88
STAG2Q8N3U4 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
STAG2Q8N3U4 AC006116.8-202ENST00000587620 1550 ntBASIC20.56■□□□□ 0.88
STAG2Q8N3U4 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
STAG2Q8N3U4 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
STAG2Q8N3U4 SEC14L2-215ENST00000617837 2632 ntTSL 2 BASIC20.56■□□□□ 0.88
STAG2Q8N3U4 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC20.56■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 22.6 ms