Protein–RNA interactions for Protein: Q8IW19

APLF, Aprataxin and PNK-like factor, humanhuman

Predicted RBP Predictions only

Length 511 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APLFQ8IW19 SSH1-201ENST00000326470 2432 ntAPPRIS ALT2 TSL 2 BASIC17.7■□□□□ 0.42
APLFQ8IW19 MIB1-201ENST00000261537 9576 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
APLFQ8IW19 PIGW-204ENST00000614443 2312 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
APLFQ8IW19 PXK-206ENST00000463280 2825 ntTSL 2 BASIC17.7■□□□□ 0.42
APLFQ8IW19 FLJ38576-201ENST00000623820 2459 ntBASIC17.7■□□□□ 0.42
APLFQ8IW19 SLC25A35-202ENST00000577745 1860 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
APLFQ8IW19 HSD17B10-201ENST00000168216 960 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
APLFQ8IW19 IGLL1-201ENST00000249053 716 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
APLFQ8IW19 FAM187B-201ENST00000324675 1184 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
APLFQ8IW19 IFT27-201ENST00000340630 1113 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
APLFQ8IW19 CD1E-210ENST00000368165 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
APLFQ8IW19 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
APLFQ8IW19 AP000347.1-209ENST00000437294 557 ntTSL 4 BASIC17.7■□□□□ 0.42
APLFQ8IW19 CD1E-214ENST00000452291 745 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
APLFQ8IW19 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC17.7■□□□□ 0.42
APLFQ8IW19 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC17.7■□□□□ 0.42
APLFQ8IW19 FXYD7-203ENST00000586063 456 ntAPPRIS ALT2 TSL 3 BASIC17.7■□□□□ 0.42
APLFQ8IW19 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC17.7■□□□□ 0.42
APLFQ8IW19 GPX4-210ENST00000611653 793 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
APLFQ8IW19 AC083849.1-201ENST00000615227 514 ntBASIC17.7■□□□□ 0.42
APLFQ8IW19 DFFB-212ENST00000625756 649 ntTSL 5 BASIC17.7■□□□□ 0.42
APLFQ8IW19 SIGLEC7-202ENST00000317643 1754 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
APLFQ8IW19 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
APLFQ8IW19 MIDN-201ENST00000300952 3790 ntAPPRIS P2 TSL 5 BASIC17.7■□□□□ 0.42
APLFQ8IW19 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
APLFQ8IW19 PLEKHG4-205ENST00000450733 4480 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
APLFQ8IW19 DNASE1L2-201ENST00000320700 1326 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
APLFQ8IW19 OR13J1-201ENST00000377981 1339 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
APLFQ8IW19 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC17.7■□□□□ 0.42
APLFQ8IW19 ILF3-203ENST00000449870 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
APLFQ8IW19 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
APLFQ8IW19 ANKRD18DP-204ENST00000455355 1975 ntBASIC17.7■□□□□ 0.42
APLFQ8IW19 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
APLFQ8IW19 ST6GALNAC6-216ENST00000622357 2396 ntAPPRIS ALT1 TSL 1 (best) BASIC17.69■□□□□ 0.42
APLFQ8IW19 NCAN-201ENST00000252575 6387 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
APLFQ8IW19 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC17.69■□□□□ 0.42
APLFQ8IW19 ADNP2-201ENST00000262198 5393 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
APLFQ8IW19 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC17.69■□□□□ 0.42
APLFQ8IW19 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
APLFQ8IW19 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
APLFQ8IW19 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
APLFQ8IW19 ATP6AP2-224ENST00000637327 1929 ntAPPRIS ALT2 TSL 2 BASIC17.69■□□□□ 0.42
APLFQ8IW19 RAD1-202ENST00000341754 2341 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
APLFQ8IW19 FAM19A3-201ENST00000361886 1056 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
APLFQ8IW19 PDLIM7-205ENST00000393551 1226 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
APLFQ8IW19 TPM4P1-201ENST00000436100 807 ntBASIC17.69■□□□□ 0.42
APLFQ8IW19 MRPL2-208ENST00000489623 570 ntTSL 2 BASIC17.69■□□□□ 0.42
APLFQ8IW19 LINC01785-201ENST00000598042 1112 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
APLFQ8IW19 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC17.69■□□□□ 0.42
APLFQ8IW19 HYMAI.1-201ENST00000620949 238 ntBASIC17.69■□□□□ 0.42
APLFQ8IW19 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC17.69■□□□□ 0.42
APLFQ8IW19 SPACA6-213ENST00000637797 1073 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
APLFQ8IW19 DMTN-223ENST00000523782 2235 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
APLFQ8IW19 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
APLFQ8IW19 IRX1P1-201ENST00000438849 1838 ntBASIC17.69■□□□□ 0.42
APLFQ8IW19 DMPK-201ENST00000291270 2787 ntAPPRIS P3 TSL 5 BASIC17.69■□□□□ 0.42
APLFQ8IW19 MYB-209ENST00000442647 3304 ntAPPRIS ALT1 TSL 1 (best) BASIC17.69■□□□□ 0.42
APLFQ8IW19 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC17.69■□□□□ 0.42
APLFQ8IW19 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
APLFQ8IW19 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
APLFQ8IW19 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
APLFQ8IW19 LBX2-AS1-201ENST00000548978 1852 ntTSL 3 BASIC17.69■□□□□ 0.42
APLFQ8IW19 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
APLFQ8IW19 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
APLFQ8IW19 AKIRIN1-201ENST00000372984 1330 ntTSL 2 BASIC17.69■□□□□ 0.42
APLFQ8IW19 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC17.69■□□□□ 0.42
APLFQ8IW19 SOX30-202ENST00000311371 2716 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
APLFQ8IW19 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC17.69■□□□□ 0.42
APLFQ8IW19 PCSK5-201ENST00000376752 5756 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
APLFQ8IW19 TNK2-AS1-201ENST00000458180 2096 ntTSL 2 BASIC17.68■□□□□ 0.42
APLFQ8IW19 TRAM1-205ENST00000521425 3394 ntTSL 2 BASIC17.68■□□□□ 0.42
APLFQ8IW19 CHAT-205ENST00000395562 2528 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
APLFQ8IW19 AC008894.3-201ENST00000624324 3103 ntBASIC17.68■□□□□ 0.42
APLFQ8IW19 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC17.68■□□□□ 0.42
APLFQ8IW19 ADAMTS13-206ENST00000371929 4934 ntAPPRIS P4 TSL 1 (best) BASIC17.68■□□□□ 0.42
APLFQ8IW19 VPS37C-201ENST00000301765 2865 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
APLFQ8IW19 MRPL24-202ENST00000368211 883 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
APLFQ8IW19 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
APLFQ8IW19 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC17.68■□□□□ 0.42
APLFQ8IW19 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC17.68■□□□□ 0.42
APLFQ8IW19 AC106771.1-201ENST00000502209 372 ntTSL 2 BASIC17.68■□□□□ 0.42
APLFQ8IW19 AC022424.1-201ENST00000512155 889 ntTSL 3 BASIC17.68■□□□□ 0.42
APLFQ8IW19 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC17.68■□□□□ 0.42
APLFQ8IW19 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC17.68■□□□□ 0.42
APLFQ8IW19 GCSHP2-201ENST00000560971 527 ntBASIC17.68■□□□□ 0.42
APLFQ8IW19 CHRNB1-207ENST00000575379 1095 ntTSL 2 BASIC17.68■□□□□ 0.42
APLFQ8IW19 JOSD2-204ENST00000598418 996 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
APLFQ8IW19 SLF2-205ENST00000609386 891 ntAPPRIS ALT2 BASIC17.68■□□□□ 0.42
APLFQ8IW19 CHST10-201ENST00000264249 2842 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
APLFQ8IW19 DRC7-201ENST00000336825 2680 ntAPPRIS ALT2 TSL 2 BASIC17.68■□□□□ 0.42
APLFQ8IW19 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC17.68■□□□□ 0.42
APLFQ8IW19 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
APLFQ8IW19 AL353608.3-201ENST00000603200 2211 ntTSL 5 BASIC17.68■□□□□ 0.42
APLFQ8IW19 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC17.68■□□□□ 0.42
APLFQ8IW19 ART1-201ENST00000250693 1312 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
APLFQ8IW19 MMAB-204ENST00000537236 1342 ntTSL 3 BASIC17.68■□□□□ 0.42
APLFQ8IW19 WDR45B-201ENST00000392325 2587 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
APLFQ8IW19 KHK-202ENST00000260599 2411 ntAPPRIS ALT1 TSL 1 (best) BASIC17.68■□□□□ 0.42
APLFQ8IW19 SMARCA4-215ENST00000590574 5282 ntAPPRIS ALT1 TSL 5 BASIC17.68■□□□□ 0.42
APLFQ8IW19 IL6R-202ENST00000368485 5914 ntAPPRIS P4 TSL 1 (best) BASIC17.68■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 34.6 ms