Protein–RNA interactions for Protein: Q86VH4

LRRTM4, Leucine-rich repeat transmembrane neuronal protein 4, humanhuman

Predictions only

Length 590 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRTM4Q86VH4 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC17.48■□□□□ 0.39
LRRTM4Q86VH4 PRSS53-201ENST00000280606 2181 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
LRRTM4Q86VH4 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
LRRTM4Q86VH4 CACNG7-201ENST00000222212 1016 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
LRRTM4Q86VH4 NDUFS7-201ENST00000233627 1039 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
LRRTM4Q86VH4 AP2S1-202ENST00000352203 793 ntTSL 2 BASIC17.48■□□□□ 0.39
LRRTM4Q86VH4 PDLIM4-202ENST00000379018 1006 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
LRRTM4Q86VH4 TPM4P1-201ENST00000436100 807 ntBASIC17.48■□□□□ 0.39
LRRTM4Q86VH4 SNHG7-203ENST00000436596 509 ntTSL 2 BASIC17.48■□□□□ 0.39
LRRTM4Q86VH4 AC064807.1-201ENST00000518942 816 ntTSL 3 BASIC17.48■□□□□ 0.39
LRRTM4Q86VH4 AC012645.3-201ENST00000568506 470 ntTSL 3 BASIC17.48■□□□□ 0.39
LRRTM4Q86VH4 RN7SL510P-201ENST00000581311 263 ntBASIC17.48■□□□□ 0.39
LRRTM4Q86VH4 AP2S1-204ENST00000597020 707 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
LRRTM4Q86VH4 ZSCAN1-203ENST00000601162 813 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
LRRTM4Q86VH4 HNF1B-206ENST00000620125 1103 ntTSL 5 BASIC17.48■□□□□ 0.39
LRRTM4Q86VH4 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC17.48■□□□□ 0.39
LRRTM4Q86VH4 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
LRRTM4Q86VH4 MAIP1-202ENST00000392290 1386 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
LRRTM4Q86VH4 DNAJC28-203ENST00000402202 1480 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
LRRTM4Q86VH4 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
LRRTM4Q86VH4 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
LRRTM4Q86VH4 SERPINB6-207ENST00000612421 1570 ntTSL 2 BASIC17.48■□□□□ 0.39
LRRTM4Q86VH4 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
LRRTM4Q86VH4 EEPD1-201ENST00000242108 4765 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
LRRTM4Q86VH4 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC17.48■□□□□ 0.39
LRRTM4Q86VH4 CPAMD8-203ENST00000443236 5992 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
LRRTM4Q86VH4 GNAZ-203ENST00000615612 3333 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
LRRTM4Q86VH4 LCAT-201ENST00000264005 1507 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
LRRTM4Q86VH4 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
LRRTM4Q86VH4 CCDC78-201ENST00000293889 1611 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
LRRTM4Q86VH4 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
LRRTM4Q86VH4 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC17.47■□□□□ 0.39
LRRTM4Q86VH4 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
LRRTM4Q86VH4 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC17.47■□□□□ 0.39
LRRTM4Q86VH4 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC17.47■□□□□ 0.39
LRRTM4Q86VH4 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
LRRTM4Q86VH4 KIAA1522-202ENST00000373480 5294 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
LRRTM4Q86VH4 KIAA1522-203ENST00000373481 5293 ntAPPRIS ALT2 TSL 2 BASIC17.47■□□□□ 0.39
LRRTM4Q86VH4 AC004870.1-201ENST00000315132 882 ntBASIC17.47■□□□□ 0.39
LRRTM4Q86VH4 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
LRRTM4Q86VH4 C6orf48-204ENST00000375639 712 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
LRRTM4Q86VH4 IGF2-202ENST00000381392 1005 ntAPPRIS ALT1 TSL 1 (best) BASIC17.47■□□□□ 0.39
LRRTM4Q86VH4 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC17.47■□□□□ 0.39
LRRTM4Q86VH4 DDX43P3-201ENST00000441064 443 ntBASIC17.47■□□□□ 0.39
LRRTM4Q86VH4 TMEM41B-203ENST00000527813 803 ntTSL 5 BASIC17.47■□□□□ 0.39
LRRTM4Q86VH4 PLPP5-214ENST00000531823 875 ntTSL 3 BASIC17.47■□□□□ 0.39
LRRTM4Q86VH4 AL512357.1-201ENST00000557687 518 ntTSL 4 BASIC17.47■□□□□ 0.39
LRRTM4Q86VH4 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
LRRTM4Q86VH4 C19orf25-210ENST00000591027 574 ntTSL 4 BASIC17.47■□□□□ 0.39
LRRTM4Q86VH4 AC010522.1-205ENST00000598031 606 ntAPPRIS P1 TSL 3 BASIC17.47■□□□□ 0.39
LRRTM4Q86VH4 AC114488.2-214ENST00000609033 813 ntTSL 5 BASIC17.47■□□□□ 0.39
LRRTM4Q86VH4 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
LRRTM4Q86VH4 GIPR-201ENST00000263281 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
LRRTM4Q86VH4 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
LRRTM4Q86VH4 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC17.47■□□□□ 0.39
LRRTM4Q86VH4 DTNB-209ENST00000407038 2294 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
LRRTM4Q86VH4 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
LRRTM4Q86VH4 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC17.47■□□□□ 0.39
LRRTM4Q86VH4 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC17.47■□□□□ 0.39
LRRTM4Q86VH4 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC17.47■□□□□ 0.39
LRRTM4Q86VH4 AC009949.1-201ENST00000623048 1830 ntBASIC17.47■□□□□ 0.39
LRRTM4Q86VH4 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
LRRTM4Q86VH4 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC17.47■□□□□ 0.39
LRRTM4Q86VH4 SPRED3-201ENST00000338502 4778 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
LRRTM4Q86VH4 MEGF9-201ENST00000373930 6298 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.39
LRRTM4Q86VH4 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC17.46■□□□□ 0.39
LRRTM4Q86VH4 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
LRRTM4Q86VH4 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
LRRTM4Q86VH4 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC17.46■□□□□ 0.39
LRRTM4Q86VH4 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC17.46■□□□□ 0.39
LRRTM4Q86VH4 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
LRRTM4Q86VH4 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC17.46■□□□□ 0.39
LRRTM4Q86VH4 AL390961.4-201ENST00000623958 2535 ntBASIC17.46■□□□□ 0.39
LRRTM4Q86VH4 TPSD1-201ENST00000211076 1499 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
LRRTM4Q86VH4 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC17.46■□□□□ 0.39
LRRTM4Q86VH4 FAM237A-203ENST00000543490 1376 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
LRRTM4Q86VH4 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
LRRTM4Q86VH4 EMD-201ENST00000369835 966 ntTSL 3 BASIC17.46■□□□□ 0.39
LRRTM4Q86VH4 CTNS-203ENST00000399306 803 ntTSL 3 BASIC17.46■□□□□ 0.39
LRRTM4Q86VH4 C7orf34-201ENST00000409607 766 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
LRRTM4Q86VH4 PLD3-207ENST00000409735 2140 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
LRRTM4Q86VH4 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC17.46■□□□□ 0.39
LRRTM4Q86VH4 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC17.46■□□□□ 0.39
LRRTM4Q86VH4 REPIN1-217ENST00000518514 478 ntTSL 3 BASIC17.46■□□□□ 0.39
LRRTM4Q86VH4 ADA-207ENST00000537820 1128 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
LRRTM4Q86VH4 SPAG7-207ENST00000575142 1094 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
LRRTM4Q86VH4 FGF11-204ENST00000575235 928 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
LRRTM4Q86VH4 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
LRRTM4Q86VH4 GZMM-202ENST00000592501 941 ntTSL 3 BASIC17.46■□□□□ 0.39
LRRTM4Q86VH4 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
LRRTM4Q86VH4 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC17.46■□□□□ 0.39
LRRTM4Q86VH4 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
LRRTM4Q86VH4 ABHD14B-203ENST00000395008 1818 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
LRRTM4Q86VH4 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC17.46■□□□□ 0.39
LRRTM4Q86VH4 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC17.46■□□□□ 0.39
LRRTM4Q86VH4 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
LRRTM4Q86VH4 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC17.45■□□□□ 0.38
LRRTM4Q86VH4 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
LRRTM4Q86VH4 HLA-DQB1-201ENST00000374943 1656 ntBASIC17.45■□□□□ 0.38
LRRTM4Q86VH4 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 38.7 ms