Protein–RNA interactions for Protein: Q6P161

MRPL54, 39S ribosomal protein L54, mitochondrial, humanhuman

Known RBP Predictions only

Length 138 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL54Q6P161 PPP1R26-206ENST00000605660 4502 ntAPPRIS P1 BASIC13.5□□□□□ -0.25
MRPL54Q6P161 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
MRPL54Q6P161 LARP6-201ENST00000299213 4469 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
MRPL54Q6P161 AC021683.3-202ENST00000592572 4440 ntTSL 5 BASIC13.5□□□□□ -0.25
MRPL54Q6P161 THEM4-201ENST00000368814 2377 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
MRPL54Q6P161 DUOX1-201ENST00000321429 5738 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
MRPL54Q6P161 ZNF764-202ENST00000395091 2970 ntAPPRIS ALT1 TSL 2 BASIC13.5□□□□□ -0.25
MRPL54Q6P161 ARHGEF6-202ENST00000370620 4764 ntTSL 2 BASIC13.5□□□□□ -0.25
MRPL54Q6P161 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
MRPL54Q6P161 PTPRF-201ENST00000359947 7727 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
MRPL54Q6P161 DRC7-201ENST00000336825 2680 ntAPPRIS ALT2 TSL 2 BASIC13.49□□□□□ -0.25
MRPL54Q6P161 RTKN2-203ENST00000395260 2076 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
MRPL54Q6P161 HNF1A-212ENST00000544413 2014 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
MRPL54Q6P161 NUTM2F-201ENST00000253262 2561 ntAPPRIS P2 TSL 1 (best) BASIC13.49□□□□□ -0.25
MRPL54Q6P161 RASA2-202ENST00000452898 2562 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
MRPL54Q6P161 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
MRPL54Q6P161 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
MRPL54Q6P161 TNKS-211ENST00000520408 1964 ntTSL 2 BASIC13.49□□□□□ -0.25
MRPL54Q6P161 SYTL3-202ENST00000360448 2504 ntAPPRIS ALT1 TSL 5 BASIC13.49□□□□□ -0.25
MRPL54Q6P161 TICAM2-201ENST00000427199 3049 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
MRPL54Q6P161 WDR81-206ENST00000446363 2968 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
MRPL54Q6P161 CYP4F22-202ENST00000601005 2445 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
MRPL54Q6P161 TMEM175-201ENST00000264771 1860 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
MRPL54Q6P161 HDAC5-202ENST00000336057 5040 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
MRPL54Q6P161 LMAN1-201ENST00000251047 5521 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
MRPL54Q6P161 AC007326.2-201ENST00000624224 7579 ntBASIC13.49□□□□□ -0.25
MRPL54Q6P161 MBNL1-202ENST00000282488 6458 ntTSL 5 BASIC13.49□□□□□ -0.25
MRPL54Q6P161 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
MRPL54Q6P161 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC13.49□□□□□ -0.25
MRPL54Q6P161 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
MRPL54Q6P161 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC13.49□□□□□ -0.25
MRPL54Q6P161 CHCHD10-201ENST00000401675 691 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
MRPL54Q6P161 APTR-203ENST00000430801 583 ntTSL 5 BASIC13.49□□□□□ -0.25
MRPL54Q6P161 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC13.49□□□□□ -0.25
MRPL54Q6P161 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC13.49□□□□□ -0.25
MRPL54Q6P161 RGMA-211ENST00000557420 989 ntTSL 3 BASIC13.49□□□□□ -0.25
MRPL54Q6P161 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC13.49□□□□□ -0.25
MRPL54Q6P161 MIF4GD-211ENST00000580571 952 ntTSL 2 BASIC13.49□□□□□ -0.25
MRPL54Q6P161 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC13.49□□□□□ -0.25
MRPL54Q6P161 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
MRPL54Q6P161 AC092437.1-201ENST00000624794 1048 ntBASIC13.49□□□□□ -0.25
MRPL54Q6P161 CRY1-201ENST00000008527 3267 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
MRPL54Q6P161 PM20D2-201ENST00000275072 4708 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
MRPL54Q6P161 SCP2-204ENST00000407246 2239 ntTSL 2 BASIC13.49□□□□□ -0.25
MRPL54Q6P161 ZMIZ2-202ENST00000309315 5144 ntAPPRIS P4 TSL 2 BASIC13.49□□□□□ -0.25
MRPL54Q6P161 LCK-201ENST00000333070 2166 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
MRPL54Q6P161 CD5L-201ENST00000368174 2191 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
MRPL54Q6P161 PML-221ENST00000569965 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
MRPL54Q6P161 SH2B1-203ENST00000359285 3033 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
MRPL54Q6P161 LRRC23-209ENST00000443597 1628 ntAPPRIS P4 TSL 1 (best) BASIC13.49□□□□□ -0.25
MRPL54Q6P161 GRAMD1A-202ENST00000411896 2523 ntAPPRIS ALT2 TSL 2 BASIC13.49□□□□□ -0.25
MRPL54Q6P161 PNKD-202ENST00000258362 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
MRPL54Q6P161 SPAG1-202ENST00000388798 3852 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
MRPL54Q6P161 KRT8P41-201ENST00000533985 1514 ntBASIC13.49□□□□□ -0.25
MRPL54Q6P161 GALNT6-201ENST00000356317 2809 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
MRPL54Q6P161 CHD1L-203ENST00000369259 2358 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
MRPL54Q6P161 DCAF17-202ENST00000375255 5828 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
MRPL54Q6P161 DLG4-201ENST00000302955 3184 ntAPPRIS P3 TSL 5 BASIC13.48□□□□□ -0.25
MRPL54Q6P161 DLG4-202ENST00000399506 3185 ntAPPRIS ALT1 TSL 2 BASIC13.48□□□□□ -0.25
MRPL54Q6P161 PTPN21-201ENST00000328736 6089 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
MRPL54Q6P161 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC13.48□□□□□ -0.25
MRPL54Q6P161 SLC5A2-201ENST00000330498 2271 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
MRPL54Q6P161 PANK4-201ENST00000378466 2677 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
MRPL54Q6P161 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
MRPL54Q6P161 RAD23B-201ENST00000358015 4119 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
MRPL54Q6P161 NR4A1-204ENST00000394825 2528 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
MRPL54Q6P161 MYB-203ENST00000341911 3672 ntAPPRIS ALT1 TSL 1 (best) BASIC13.48□□□□□ -0.25
MRPL54Q6P161 CD34-202ENST00000356522 2874 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
MRPL54Q6P161 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC13.48□□□□□ -0.25
MRPL54Q6P161 GCSH-209ENST00000639689 2412 ntTSL 5 BASIC13.48□□□□□ -0.25
MRPL54Q6P161 MAD1L1-202ENST00000399654 2762 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
MRPL54Q6P161 PCDHB17P-201ENST00000539533 2393 ntBASIC13.48□□□□□ -0.25
MRPL54Q6P161 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
MRPL54Q6P161 N4BP2L1-203ENST00000380133 903 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
MRPL54Q6P161 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
MRPL54Q6P161 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC13.48□□□□□ -0.25
MRPL54Q6P161 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC13.48□□□□□ -0.25
MRPL54Q6P161 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC13.48□□□□□ -0.25
MRPL54Q6P161 HLA-A-209ENST00000638375 975 ntBASIC13.48□□□□□ -0.25
MRPL54Q6P161 ITGA7-202ENST00000347027 4084 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.25
MRPL54Q6P161 ACE-204ENST00000428043 5120 ntTSL 2 BASIC13.48□□□□□ -0.25
MRPL54Q6P161 PCDHGA11-202ENST00000518882 2263 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
MRPL54Q6P161 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
MRPL54Q6P161 MAP3K20-203ENST00000409176 2572 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
MRPL54Q6P161 PCDHA6-202ENST00000527624 2231 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
MRPL54Q6P161 SNX16-201ENST00000345957 1853 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
MRPL54Q6P161 LETM2-202ENST00000379957 1873 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.25
MRPL54Q6P161 PLXNB1-202ENST00000358536 7308 ntAPPRIS P2 TSL 1 (best) BASIC13.48□□□□□ -0.25
MRPL54Q6P161 LONRF1-201ENST00000398246 3594 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
MRPL54Q6P161 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
MRPL54Q6P161 FAM104A-202ENST00000405159 2865 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
MRPL54Q6P161 NLGN4X-203ENST00000381093 5865 ntAPPRIS P2 TSL 2 BASIC13.48□□□□□ -0.25
MRPL54Q6P161 AL603756.1-201ENST00000606511 2163 ntBASIC13.48□□□□□ -0.25
MRPL54Q6P161 CACNB3-203ENST00000540990 1814 ntTSL 2 BASIC13.48□□□□□ -0.25
MRPL54Q6P161 CSNK1A1L-201ENST00000379800 2406 ntAPPRIS P1 BASIC13.48□□□□□ -0.25
MRPL54Q6P161 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC13.47□□□□□ -0.25
MRPL54Q6P161 NDUFA6-AS1-203ENST00000439129 2950 ntTSL 5 BASIC13.47□□□□□ -0.25
MRPL54Q6P161 HNF1A-215ENST00000615446 2344 ntTSL 5 BASIC13.47□□□□□ -0.25
MRPL54Q6P161 CALU-205ENST00000535011 3210 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
MRPL54Q6P161 FRS2-206ENST00000549921 1952 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 42.7 ms