Protein–RNA interactions for Protein: Q08945

SSRP1, FACT complex subunit SSRP1, humanhuman

Known RBP Predictions only

Length 709 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSRP1Q08945 CHCHD2P8-201ENST00000429873 447 ntBASIC20.68■□□□□ 0.9
SSRP1Q08945 CATIP-AS1-202ENST00000441749 480 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
SSRP1Q08945 IGFLR1-209ENST00000592537 1195 ntAPPRIS P2 TSL 1 (best) BASIC20.68■□□□□ 0.9
SSRP1Q08945 AL358472.4-201ENST00000633140 710 ntBASIC20.68■□□□□ 0.9
SSRP1Q08945 AP000550.4-202ENST00000639755 178 ntBASIC20.68■□□□□ 0.9
SSRP1Q08945 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
SSRP1Q08945 LTV1-201ENST00000367576 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
SSRP1Q08945 AC133561.2-201ENST00000380145 1802 ntTSL 2 BASIC20.68■□□□□ 0.9
SSRP1Q08945 ABHD14B-203ENST00000395008 1818 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
SSRP1Q08945 SPAG16-209ENST00000447990 1330 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
SSRP1Q08945 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC20.68■□□□□ 0.9
SSRP1Q08945 CACNA1A-227ENST00000636549 6792 ntAPPRIS ALT2 TSL 5 BASIC20.68■□□□□ 0.9
SSRP1Q08945 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC20.68■□□□□ 0.9
SSRP1Q08945 CNTNAP3-204ENST00000377656 4986 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
SSRP1Q08945 POLD4-205ENST00000529704 1486 ntTSL 2 BASIC20.68■□□□□ 0.9
SSRP1Q08945 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
SSRP1Q08945 LINC00896-202ENST00000609602 2128 ntBASIC20.68■□□□□ 0.9
SSRP1Q08945 OPRK1-202ENST00000520287 1602 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
SSRP1Q08945 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC20.67■□□□□ 0.9
SSRP1Q08945 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
SSRP1Q08945 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC20.67■□□□□ 0.9
SSRP1Q08945 LRRC27-214ENST00000625755 1738 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
SSRP1Q08945 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC20.67■□□□□ 0.9
SSRP1Q08945 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC20.67■□□□□ 0.9
SSRP1Q08945 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
SSRP1Q08945 PGLS-201ENST00000252603 1028 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
SSRP1Q08945 SSSCA1-201ENST00000309328 698 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
SSRP1Q08945 LCE1D-201ENST00000326233 430 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
SSRP1Q08945 AC093734.1-201ENST00000416100 242 ntTSL 3 BASIC20.67■□□□□ 0.9
SSRP1Q08945 HOXB-AS3-203ENST00000465846 434 ntTSL 3 BASIC20.67■□□□□ 0.9
SSRP1Q08945 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
SSRP1Q08945 AL161669.1-201ENST00000559843 386 ntTSL 3 BASIC20.67■□□□□ 0.9
SSRP1Q08945 AC027682.5-201ENST00000567122 530 ntTSL 3 BASIC20.67■□□□□ 0.9
SSRP1Q08945 AC010463.1-201ENST00000596542 1207 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
SSRP1Q08945 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC20.67■□□□□ 0.9
SSRP1Q08945 SLCO6A1-202ENST00000389019 2340 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
SSRP1Q08945 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
SSRP1Q08945 MCTP2-205ENST00000543482 1422 ntTSL 2 BASIC20.67■□□□□ 0.9
SSRP1Q08945 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC20.67■□□□□ 0.9
SSRP1Q08945 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC20.67■□□□□ 0.9
SSRP1Q08945 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC20.67■□□□□ 0.9
SSRP1Q08945 E2F2-201ENST00000361729 5191 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
SSRP1Q08945 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
SSRP1Q08945 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
SSRP1Q08945 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC20.66■□□□□ 0.9
SSRP1Q08945 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC20.66■□□□□ 0.9
SSRP1Q08945 ARID3A-201ENST00000263620 5941 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
SSRP1Q08945 ARFGAP2-229ENST00000627920 2613 ntTSL 2 BASIC20.66■□□□□ 0.9
SSRP1Q08945 AP001273.2-201ENST00000638767 2993 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
SSRP1Q08945 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
SSRP1Q08945 CDC42EP3-201ENST00000295324 5700 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
SSRP1Q08945 ELANE-201ENST00000263621 920 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
SSRP1Q08945 KCNK7-202ENST00000342202 1283 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
SSRP1Q08945 HIST1H2AI-201ENST00000358739 503 ntAPPRIS P1 BASIC20.66■□□□□ 0.9
SSRP1Q08945 C1QC-203ENST00000374640 1163 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
SSRP1Q08945 PDLIM7-205ENST00000393551 1226 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
SSRP1Q08945 AL109797.1-201ENST00000452501 835 ntTSL 2 BASIC20.66■□□□□ 0.9
SSRP1Q08945 LAT-211ENST00000566177 786 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
SSRP1Q08945 AC011840.4-201ENST00000578471 627 ntBASIC20.66■□□□□ 0.9
SSRP1Q08945 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC20.66■□□□□ 0.9
SSRP1Q08945 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC20.66■□□□□ 0.9
SSRP1Q08945 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC20.66■□□□□ 0.9
SSRP1Q08945 CHEK2-202ENST00000348295 1771 ntTSL 5 BASIC20.66■□□□□ 0.9
SSRP1Q08945 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC20.66■□□□□ 0.9
SSRP1Q08945 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC20.66■□□□□ 0.9
SSRP1Q08945 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC20.66■□□□□ 0.9
SSRP1Q08945 ZNF133-212ENST00000622607 2660 ntAPPRIS ALT2 TSL 4 BASIC20.66■□□□□ 0.9
SSRP1Q08945 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
SSRP1Q08945 PLBD2-201ENST00000280800 4800 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
SSRP1Q08945 SLC9A6-208ENST00000636206 4711 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
SSRP1Q08945 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
SSRP1Q08945 ZNF22-201ENST00000298299 2551 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
SSRP1Q08945 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC20.65■□□□□ 0.9
SSRP1Q08945 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
SSRP1Q08945 ARHGAP26-201ENST00000274498 6862 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
SSRP1Q08945 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC20.65■□□□□ 0.9
SSRP1Q08945 AL355312.1-201ENST00000407115 2176 ntBASIC20.65■□□□□ 0.9
SSRP1Q08945 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC20.65■□□□□ 0.9
SSRP1Q08945 DUS3L-201ENST00000309061 2113 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
SSRP1Q08945 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
SSRP1Q08945 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC20.65■□□□□ 0.9
SSRP1Q08945 DACH1-202ENST00000613252 5233 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
SSRP1Q08945 PDLIM7-202ENST00000355841 1689 ntAPPRIS P4 TSL 1 (best) BASIC20.65■□□□□ 0.9
SSRP1Q08945 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC20.65■□□□□ 0.9
SSRP1Q08945 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
SSRP1Q08945 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
SSRP1Q08945 GLYCTK-201ENST00000305690 1371 ntTSL 5 BASIC20.65■□□□□ 0.9
SSRP1Q08945 DTNBP1-203ENST00000355917 1359 ntTSL 5 BASIC20.65■□□□□ 0.9
SSRP1Q08945 BCL2L10-201ENST00000260442 1249 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
SSRP1Q08945 METTL21C-201ENST00000267273 1088 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
SSRP1Q08945 NUDT6-201ENST00000304430 1169 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
SSRP1Q08945 TYMSOS-201ENST00000323813 844 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
SSRP1Q08945 RPS19BP1-201ENST00000334678 927 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
SSRP1Q08945 ING5-202ENST00000406941 946 ntAPPRIS ALT1 TSL 1 (best) BASIC20.65■□□□□ 0.9
SSRP1Q08945 AL845331.1-201ENST00000424978 1190 ntBASIC20.65■□□□□ 0.9
SSRP1Q08945 SSR4P1-202ENST00000429427 967 ntTSL 5 BASIC20.65■□□□□ 0.9
SSRP1Q08945 TSSC2-201ENST00000450217 709 ntBASIC20.65■□□□□ 0.9
SSRP1Q08945 RNF146-204ENST00000476956 884 ntTSL 2 BASIC20.65■□□□□ 0.9
SSRP1Q08945 TFF3-204ENST00000518498 1109 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
SSRP1Q08945 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC20.65■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 34.1 ms