Protein–RNA interactions for Protein: Q02985

CFHR3, Complement factor H-related protein 3, humanhuman

Predictions only

Length 330 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFHR3Q02985 ENTPD2-202ENST00000355097 2095 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
CFHR3Q02985 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
CFHR3Q02985 PRSS53-201ENST00000280606 2181 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
CFHR3Q02985 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
CFHR3Q02985 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC13.92□□□□□ -0.18
CFHR3Q02985 HLA-DQB1-201ENST00000374943 1656 ntBASIC13.92□□□□□ -0.18
CFHR3Q02985 RBFA-202ENST00000306735 1407 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
CFHR3Q02985 C4orf50-202ENST00000531445 6860 ntAPPRIS P5 TSL 5 BASIC13.92□□□□□ -0.18
CFHR3Q02985 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
CFHR3Q02985 NDUFS7-201ENST00000233627 1039 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
CFHR3Q02985 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC13.92□□□□□ -0.18
CFHR3Q02985 ATP5J-201ENST00000284971 614 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
CFHR3Q02985 EMD-201ENST00000369835 966 ntTSL 3 BASIC13.92□□□□□ -0.18
CFHR3Q02985 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC13.92□□□□□ -0.18
CFHR3Q02985 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC13.92□□□□□ -0.18
CFHR3Q02985 AP003555.3-201ENST00000534086 432 ntTSL 4 BASIC13.92□□□□□ -0.18
CFHR3Q02985 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC13.92□□□□□ -0.18
CFHR3Q02985 AC021739.5-201ENST00000558637 494 ntTSL 3 BASIC13.92□□□□□ -0.18
CFHR3Q02985 ANKRD34C-AS1-205ENST00000560452 576 ntTSL 4 BASIC13.92□□□□□ -0.18
CFHR3Q02985 AC012645.3-201ENST00000568506 470 ntTSL 3 BASIC13.92□□□□□ -0.18
CFHR3Q02985 AC005625.1-201ENST00000590304 472 ntTSL 3 BASIC13.92□□□□□ -0.18
CFHR3Q02985 CCDC61-202ENST00000594087 1017 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
CFHR3Q02985 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC13.92□□□□□ -0.18
CFHR3Q02985 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
CFHR3Q02985 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
CFHR3Q02985 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
CFHR3Q02985 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
CFHR3Q02985 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
CFHR3Q02985 DCAF8-218ENST00000610139 1607 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
CFHR3Q02985 CLDN6-202ENST00000396925 1739 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
CFHR3Q02985 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC13.92□□□□□ -0.18
CFHR3Q02985 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
CFHR3Q02985 LRRC58-201ENST00000295628 7903 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
CFHR3Q02985 MGLL-204ENST00000434178 4941 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
CFHR3Q02985 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
CFHR3Q02985 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
CFHR3Q02985 CLDN14-203ENST00000399136 1330 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
CFHR3Q02985 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
CFHR3Q02985 EEPD1-201ENST00000242108 4765 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
CFHR3Q02985 CACNA1I-201ENST00000401624 6740 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
CFHR3Q02985 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
CFHR3Q02985 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
CFHR3Q02985 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC13.91□□□□□ -0.18
CFHR3Q02985 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
CFHR3Q02985 NADK2-206ENST00000506945 1437 ntTSL 2 BASIC13.91□□□□□ -0.18
CFHR3Q02985 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC13.91□□□□□ -0.18
CFHR3Q02985 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC13.91□□□□□ -0.18
CFHR3Q02985 NOTCH3-201ENST00000263388 8666 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
CFHR3Q02985 RALGAPA1-219ENST00000637992 8512 ntTSL 5 BASIC13.91□□□□□ -0.18
CFHR3Q02985 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
CFHR3Q02985 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC13.91□□□□□ -0.18
CFHR3Q02985 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC13.91□□□□□ -0.18
CFHR3Q02985 CCDC78-201ENST00000293889 1611 ntAPPRIS P2 TSL 1 (best) BASIC13.91□□□□□ -0.18
CFHR3Q02985 RSPH14-201ENST00000216036 1291 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
CFHR3Q02985 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
CFHR3Q02985 ASGR1-202ENST00000380920 944 ntTSL 3 BASIC13.91□□□□□ -0.18
CFHR3Q02985 FAM220CP-201ENST00000395253 831 ntBASIC13.91□□□□□ -0.18
CFHR3Q02985 GGT1-207ENST00000404532 853 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
CFHR3Q02985 KRTCAP3-202ENST00000407293 942 ntTSL 2 BASIC13.91□□□□□ -0.18
CFHR3Q02985 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC13.91□□□□□ -0.18
CFHR3Q02985 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC13.91□□□□□ -0.18
CFHR3Q02985 AC064807.1-201ENST00000518942 816 ntTSL 3 BASIC13.91□□□□□ -0.18
CFHR3Q02985 AP000721.2-201ENST00000537170 650 ntTSL 4 BASIC13.91□□□□□ -0.18
CFHR3Q02985 TPM1-218ENST00000559281 851 ntTSL 5 BASIC13.91□□□□□ -0.18
CFHR3Q02985 AC010632.1-201ENST00000590376 572 ntTSL 4 BASIC13.91□□□□□ -0.18
CFHR3Q02985 ZSCAN1-203ENST00000601162 813 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
CFHR3Q02985 AC116407.2-201ENST00000613639 860 ntBASIC13.91□□□□□ -0.18
CFHR3Q02985 IRF5-214ENST00000613821 595 ntTSL 5 BASIC13.91□□□□□ -0.18
CFHR3Q02985 AL691432.3-201ENST00000621860 400 ntBASIC13.91□□□□□ -0.18
CFHR3Q02985 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
CFHR3Q02985 ABHD14B-203ENST00000395008 1818 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
CFHR3Q02985 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
CFHR3Q02985 PORCN-205ENST00000367574 1368 ntAPPRIS ALT1 TSL 1 (best) BASIC13.91□□□□□ -0.18
CFHR3Q02985 PORCN-214ENST00000537758 1371 ntAPPRIS ALT1 TSL 1 (best) BASIC13.91□□□□□ -0.18
CFHR3Q02985 PLD3-207ENST00000409735 2140 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
CFHR3Q02985 PTPRF-209ENST00000438120 6377 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
CFHR3Q02985 PCDHA8-202ENST00000531613 5260 ntAPPRIS P2 TSL 1 (best) BASIC13.91□□□□□ -0.18
CFHR3Q02985 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
CFHR3Q02985 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC13.91□□□□□ -0.18
CFHR3Q02985 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC13.91□□□□□ -0.18
CFHR3Q02985 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
CFHR3Q02985 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC13.91□□□□□ -0.18
CFHR3Q02985 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
CFHR3Q02985 DTNB-209ENST00000407038 2294 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
CFHR3Q02985 TBC1D4-202ENST00000377636 6364 ntAPPRIS P3 TSL 2 BASIC13.9□□□□□ -0.18
CFHR3Q02985 OXSR1-201ENST00000311806 4553 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
CFHR3Q02985 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
CFHR3Q02985 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
CFHR3Q02985 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
CFHR3Q02985 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC13.9□□□□□ -0.18
CFHR3Q02985 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC13.9□□□□□ -0.18
CFHR3Q02985 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
CFHR3Q02985 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
CFHR3Q02985 LHFPL6-201ENST00000379589 2110 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
CFHR3Q02985 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
CFHR3Q02985 SREBF2-201ENST00000361204 5240 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
CFHR3Q02985 TMEM14A-201ENST00000211314 992 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
CFHR3Q02985 CACNG7-201ENST00000222212 1016 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
CFHR3Q02985 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
CFHR3Q02985 CTNS-203ENST00000399306 803 ntTSL 3 BASIC13.9□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 31.4 ms