Protein–RNA interactions for Protein: P62304

SNRPE, Small nuclear ribonucleoprotein E, humanhuman

Known RBP Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPEP62304 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC13.66□□□□□ -0.22
SNRPEP62304 SLC22A18AS-203ENST00000625099 1659 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
SNRPEP62304 RUBCNL-204ENST00000378797 3206 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
SNRPEP62304 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC13.66□□□□□ -0.22
SNRPEP62304 HS2ST1-201ENST00000370550 6736 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
SNRPEP62304 SMARCA2-203ENST00000349721 5761 ntTSL 5 BASIC13.66□□□□□ -0.22
SNRPEP62304 KRT18P55-202ENST00000578578 1546 ntBASIC13.66□□□□□ -0.22
SNRPEP62304 UNC13B-203ENST00000396787 5293 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
SNRPEP62304 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC13.66□□□□□ -0.22
SNRPEP62304 NUP88-207ENST00000573584 2916 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
SNRPEP62304 KCNQ4-201ENST00000347132 4099 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
SNRPEP62304 AC092364.2-201ENST00000596710 2692 ntBASIC13.66□□□□□ -0.22
SNRPEP62304 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
SNRPEP62304 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC13.66□□□□□ -0.22
SNRPEP62304 YBX1P1-201ENST00000445822 960 ntBASIC13.66□□□□□ -0.22
SNRPEP62304 AL033527.3-201ENST00000566366 1196 ntBASIC13.66□□□□□ -0.22
SNRPEP62304 SLC39A1-202ENST00000356205 2084 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
SNRPEP62304 TRIM39-205ENST00000396551 3249 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
SNRPEP62304 SLC25A37-206ENST00000519973 4823 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
SNRPEP62304 ENDOV-212ENST00000520284 2500 ntTSL 2 BASIC13.66□□□□□ -0.22
SNRPEP62304 TMEM30B-202ENST00000555868 4471 ntAPPRIS P1 BASIC13.66□□□□□ -0.22
SNRPEP62304 INSIG1-203ENST00000344756 2623 ntTSL 5 BASIC13.66□□□□□ -0.22
SNRPEP62304 TP53I11-208ENST00000525680 2647 ntAPPRIS P1 TSL 2 BASIC13.66□□□□□ -0.22
SNRPEP62304 CLCN1-201ENST00000343257 3172 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
SNRPEP62304 AGPAT1-202ENST00000375104 2017 ntAPPRIS P1 TSL 2 BASIC13.66□□□□□ -0.22
SNRPEP62304 CLCN7-202ENST00000382745 4720 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
SNRPEP62304 DAGLB-202ENST00000425398 2044 ntTSL 2 BASIC13.66□□□□□ -0.22
SNRPEP62304 ALPL-204ENST00000374840 2589 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
SNRPEP62304 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
SNRPEP62304 NUCKS1-201ENST00000367142 6496 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
SNRPEP62304 CALN1-201ENST00000329008 9243 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
SNRPEP62304 GPANK1-205ENST00000375906 2793 ntAPPRIS P1 TSL 2 BASIC13.66□□□□□ -0.22
SNRPEP62304 FAM160A2-203ENST00000524416 3327 ntTSL 2 BASIC13.66□□□□□ -0.22
SNRPEP62304 AIFM3-201ENST00000399163 2309 ntAPPRIS ALT1 TSL 1 (best) BASIC13.65□□□□□ -0.22
SNRPEP62304 EVPL-201ENST00000301607 6614 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
SNRPEP62304 TRIM41-201ENST00000315073 3637 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
SNRPEP62304 UBAC2-202ENST00000376440 2525 ntTSL 2 BASIC13.65□□□□□ -0.22
SNRPEP62304 CAST-224ENST00000508830 2539 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
SNRPEP62304 ANTXRL-206ENST00000622632 1964 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
SNRPEP62304 RRM2B-201ENST00000251810 4931 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
SNRPEP62304 BBS2-218ENST00000568104 2623 ntTSL 5 BASIC13.65□□□□□ -0.22
SNRPEP62304 DBNDD1-202ENST00000304733 2081 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
SNRPEP62304 NRIP1-203ENST00000400202 7671 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
SNRPEP62304 TUSC3-201ENST00000382020 3683 ntAPPRIS ALT1 TSL 1 (best) BASIC13.65□□□□□ -0.22
SNRPEP62304 PERM1-201ENST00000341290 3035 ntAPPRIS ALT2 TSL 2 BASIC13.65□□□□□ -0.22
SNRPEP62304 AC003002.1-202ENST00000596755 1743 ntAPPRIS P1 BASIC13.65□□□□□ -0.22
SNRPEP62304 GPN1-201ENST00000264718 2496 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
SNRPEP62304 AL353803.2-201ENST00000436510 1846 ntTSL 5 BASIC13.65□□□□□ -0.22
SNRPEP62304 OCIAD1-204ENST00000425583 1915 ntTSL 3 BASIC13.65□□□□□ -0.22
SNRPEP62304 CTBP1-209ENST00000510568 4250 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
SNRPEP62304 ARHGAP22-201ENST00000249601 2751 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
SNRPEP62304 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
SNRPEP62304 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC13.65□□□□□ -0.22
SNRPEP62304 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC13.65□□□□□ -0.22
SNRPEP62304 AC137630.3-201ENST00000607245 391 ntBASIC13.65□□□□□ -0.22
SNRPEP62304 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC13.65□□□□□ -0.22
SNRPEP62304 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC13.65□□□□□ -0.22
SNRPEP62304 LRFN1-201ENST00000248668 3381 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
SNRPEP62304 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
SNRPEP62304 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC13.65□□□□□ -0.22
SNRPEP62304 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC13.65□□□□□ -0.22
SNRPEP62304 AXIN2-202ENST00000375702 2541 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
SNRPEP62304 CCHCR1-201ENST00000376266 2625 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
SNRPEP62304 ADAM15-203ENST00000356955 2949 ntAPPRIS P4 TSL 1 (best) BASIC13.65□□□□□ -0.22
SNRPEP62304 NRP2-203ENST00000357785 2926 ntAPPRIS P4 TSL 1 (best) BASIC13.65□□□□□ -0.22
SNRPEP62304 UBE2J1-201ENST00000435041 4290 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
SNRPEP62304 WNT16-201ENST00000222462 3147 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
SNRPEP62304 HNRNPU-201ENST00000283179 3120 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
SNRPEP62304 LYPLAL1-202ENST00000366928 1898 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
SNRPEP62304 TBCE-201ENST00000366601 1966 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
SNRPEP62304 NCAPH2-203ENST00000395701 2077 ntTSL 2 BASIC13.65□□□□□ -0.22
SNRPEP62304 NDRG2-211ENST00000397858 2054 ntAPPRIS P4 TSL 5 BASIC13.65□□□□□ -0.22
SNRPEP62304 ARMC5-205ENST00000563544 3549 ntAPPRIS ALT2 TSL 2 BASIC13.65□□□□□ -0.22
SNRPEP62304 ZNF232-201ENST00000250076 2179 ntAPPRIS P3 TSL 5 BASIC13.65□□□□□ -0.22
SNRPEP62304 SLC11A2-204ENST00000541174 2470 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
SNRPEP62304 ZNF385A-205ENST00000546970 2494 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
SNRPEP62304 EXOC6B-209ENST00000634650 2583 ntTSL 5 BASIC13.65□□□□□ -0.22
SNRPEP62304 MED16-207ENST00000589119 2772 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
SNRPEP62304 MAST1-201ENST00000251472 4833 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
SNRPEP62304 FAM198B-203ENST00000585682 4900 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
SNRPEP62304 AC244021.1-201ENST00000417218 3662 ntTSL 1 (best) BASIC13.65□□□□□ -0.23
SNRPEP62304 FLI1-207ENST00000534087 3859 ntTSL 2 BASIC13.65□□□□□ -0.23
SNRPEP62304 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
SNRPEP62304 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
SNRPEP62304 WDR97-201ENST00000323662 6916 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
SNRPEP62304 EIF5A-211ENST00000576930 1439 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
SNRPEP62304 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC13.64□□□□□ -0.23
SNRPEP62304 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
SNRPEP62304 RBFOX1-207ENST00000547338 1513 ntTSL 2 BASIC13.64□□□□□ -0.23
SNRPEP62304 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC13.64□□□□□ -0.23
SNRPEP62304 AC133561.2-201ENST00000380145 1802 ntTSL 2 BASIC13.64□□□□□ -0.23
SNRPEP62304 MTA3-203ENST00000406652 5484 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
SNRPEP62304 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC13.64□□□□□ -0.23
SNRPEP62304 TRAF3-202ENST00000351691 2239 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
SNRPEP62304 LINC00910-206ENST00000592135 2438 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
SNRPEP62304 CDH16-207ENST00000568632 2526 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
SNRPEP62304 RAB2A-201ENST00000262646 3848 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
SNRPEP62304 SRRD-201ENST00000215917 4020 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
SNRPEP62304 SLC4A7-212ENST00000446700 4000 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
SNRPEP62304 KDM2B-201ENST00000377069 5224 ntAPPRIS ALT2 TSL 2 BASIC13.64□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 35.4 ms