Protein–RNA interactions for Protein: P57078

RIPK4, Receptor-interacting serine/threonine-protein kinase 4, humanhuman

Predictions only

Length 832 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIPK4P57078 REXO1L6P-202ENST00000619970 1078 ntBASIC23.31■■□□□ 1.32
RIPK4P57078 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC23.31■■□□□ 1.32
RIPK4P57078 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC23.31■■□□□ 1.32
RIPK4P57078 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC23.31■■□□□ 1.32
RIPK4P57078 OLFM1-201ENST00000252854 2591 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
RIPK4P57078 ADRA1A-205ENST00000380582 2089 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
RIPK4P57078 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC23.31■■□□□ 1.32
RIPK4P57078 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC23.31■■□□□ 1.32
RIPK4P57078 CYP7B1-201ENST00000310193 2202 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
RIPK4P57078 RAB17-201ENST00000264601 1966 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
RIPK4P57078 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
RIPK4P57078 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
RIPK4P57078 TSKS-201ENST00000246801 1883 ntAPPRIS P2 TSL 1 (best) BASIC23.3■■□□□ 1.32
RIPK4P57078 FAM237A-203ENST00000543490 1376 ntAPPRIS P1 TSL 5 BASIC23.3■■□□□ 1.32
RIPK4P57078 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
RIPK4P57078 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC23.3■■□□□ 1.32
RIPK4P57078 FTMT-201ENST00000321339 879 ntAPPRIS P1 BASIC23.3■■□□□ 1.32
RIPK4P57078 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
RIPK4P57078 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC23.3■■□□□ 1.32
RIPK4P57078 STK32A-AS1-201ENST00000504297 863 ntTSL 3 BASIC23.3■■□□□ 1.32
RIPK4P57078 TRAF7-205ENST00000567653 666 ntTSL 2 BASIC23.3■■□□□ 1.32
RIPK4P57078 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC23.3■■□□□ 1.32
RIPK4P57078 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC23.3■■□□□ 1.32
RIPK4P57078 CD276-203ENST00000537340 2439 ntTSL 2 BASIC23.3■■□□□ 1.32
RIPK4P57078 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC23.3■■□□□ 1.32
RIPK4P57078 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC23.29■■□□□ 1.32
RIPK4P57078 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC23.29■■□□□ 1.32
RIPK4P57078 ACBD6-201ENST00000367595 1670 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
RIPK4P57078 CACNG7-201ENST00000222212 1016 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
RIPK4P57078 PRSS38-201ENST00000366757 1267 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
RIPK4P57078 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC23.29■■□□□ 1.32
RIPK4P57078 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
RIPK4P57078 TPM4P1-201ENST00000436100 807 ntBASIC23.29■■□□□ 1.32
RIPK4P57078 DDX43P3-201ENST00000441064 443 ntBASIC23.29■■□□□ 1.32
RIPK4P57078 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
RIPK4P57078 AC122714.2-201ENST00000502787 707 ntBASIC23.29■■□□□ 1.32
RIPK4P57078 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC23.29■■□□□ 1.32
RIPK4P57078 AF238378.1-201ENST00000526806 358 ntBASIC23.29■■□□□ 1.32
RIPK4P57078 BMF-207ENST00000559701 630 ntTSL 3 BASIC23.29■■□□□ 1.32
RIPK4P57078 SPAG7-207ENST00000575142 1094 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
RIPK4P57078 AC020934.1-201ENST00000588469 739 ntTSL 3 BASIC23.29■■□□□ 1.32
RIPK4P57078 AC011247.3-202ENST00000605062 570 ntTSL 4 BASIC23.29■■□□□ 1.32
RIPK4P57078 ANKRD6-204ENST00000447838 2968 ntAPPRIS P3 TSL 1 (best) BASIC23.29■■□□□ 1.32
RIPK4P57078 TADA3-201ENST00000301964 2355 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
RIPK4P57078 CCDC188-201ENST00000439765 1475 ntAPPRIS P1 TSL 5 BASIC23.29■■□□□ 1.32
RIPK4P57078 TNFSF14-202ENST00000599359 1476 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
RIPK4P57078 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC23.29■■□□□ 1.32
RIPK4P57078 C8orf46-215ENST00000522977 1347 ntTSL 2 BASIC23.29■■□□□ 1.32
RIPK4P57078 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC23.29■■□□□ 1.32
RIPK4P57078 FAM13C-204ENST00000468840 2110 ntAPPRIS ALT2 TSL 2 BASIC23.29■■□□□ 1.32
RIPK4P57078 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC23.29■■□□□ 1.32
RIPK4P57078 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC23.28■■□□□ 1.32
RIPK4P57078 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
RIPK4P57078 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC23.28■■□□□ 1.32
RIPK4P57078 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
RIPK4P57078 CLEC10A-204ENST00000571664 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC23.28■■□□□ 1.32
RIPK4P57078 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
RIPK4P57078 AP2S1-202ENST00000352203 793 ntTSL 2 BASIC23.28■■□□□ 1.32
RIPK4P57078 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
RIPK4P57078 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC23.28■■□□□ 1.32
RIPK4P57078 AL591212.1-201ENST00000433646 615 ntTSL 5 BASIC23.28■■□□□ 1.32
RIPK4P57078 TMEM218-203ENST00000526175 972 ntAPPRIS P1 TSL 3 BASIC23.28■■□□□ 1.32
RIPK4P57078 FGF11-204ENST00000575235 928 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
RIPK4P57078 AC008738.3-201ENST00000589932 659 ntTSL 2 BASIC23.28■■□□□ 1.32
RIPK4P57078 AP2S1-204ENST00000597020 707 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
RIPK4P57078 AP001269.4-201ENST00000609611 512 ntBASIC23.28■■□□□ 1.32
RIPK4P57078 MAP2K3-215ENST00000627447 351 ntTSL 5 BASIC23.28■■□□□ 1.32
RIPK4P57078 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
RIPK4P57078 ECE2-201ENST00000324557 1823 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
RIPK4P57078 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
RIPK4P57078 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC23.28■■□□□ 1.32
RIPK4P57078 PROK1-201ENST00000271331 1338 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
RIPK4P57078 C2orf27B-201ENST00000623129 1325 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
RIPK4P57078 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC23.28■■□□□ 1.32
RIPK4P57078 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
RIPK4P57078 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC23.28■■□□□ 1.32
RIPK4P57078 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
RIPK4P57078 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC23.28■■□□□ 1.32
RIPK4P57078 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC23.28■■□□□ 1.32
RIPK4P57078 GTPBP8-208ENST00000619116 1378 ntTSL 5 BASIC23.27■■□□□ 1.32
RIPK4P57078 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC23.27■■□□□ 1.32
RIPK4P57078 SIRPAP1-201ENST00000448467 1770 ntBASIC23.27■■□□□ 1.32
RIPK4P57078 PODN-203ENST00000395871 2744 ntTSL 5 BASIC23.27■■□□□ 1.32
RIPK4P57078 GBGT1-203ENST00000372040 1980 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
RIPK4P57078 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC23.27■■□□□ 1.32
RIPK4P57078 TEX264-209ENST00000457573 1448 ntAPPRIS P3 TSL 5 BASIC23.27■■□□□ 1.32
RIPK4P57078 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC23.27■■□□□ 1.32
RIPK4P57078 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
RIPK4P57078 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
RIPK4P57078 AC004870.1-201ENST00000315132 882 ntBASIC23.27■■□□□ 1.32
RIPK4P57078 CD9-202ENST00000382515 1229 ntTSL 5 BASIC23.27■■□□□ 1.32
RIPK4P57078 CTNS-203ENST00000399306 803 ntTSL 3 BASIC23.27■■□□□ 1.32
RIPK4P57078 EMC9-202ENST00000419198 953 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
RIPK4P57078 AC021739.5-201ENST00000558637 494 ntTSL 3 BASIC23.27■■□□□ 1.32
RIPK4P57078 FAM220A-205ENST00000578372 207 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
RIPK4P57078 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC23.27■■□□□ 1.32
RIPK4P57078 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC23.27■■□□□ 1.32
RIPK4P57078 AC012317.2-201ENST00000623305 2251 ntBASIC23.27■■□□□ 1.32
RIPK4P57078 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC23.27■■□□□ 1.32
RIPK4P57078 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC23.27■■□□□ 1.32
Retrieved 100 of 98,524 protein–RNA pairs in 42.4 ms