Protein–RNA interactions for Protein: P56747

CLDN6, Claudin-6, humanhuman

Predictions only

Length 220 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN6P56747 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC17.05■□□□□ 0.32
CLDN6P56747 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC17.05■□□□□ 0.32
CLDN6P56747 SH3BP5-203ENST00000408919 1880 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
CLDN6P56747 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC17.05■□□□□ 0.32
CLDN6P56747 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC17.05■□□□□ 0.32
CLDN6P56747 AZIN2-203ENST00000373441 1443 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
CLDN6P56747 LMCD1-204ENST00000426878 1431 ntTSL 2 BASIC17.05■□□□□ 0.32
CLDN6P56747 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
CLDN6P56747 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC17.05■□□□□ 0.32
CLDN6P56747 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
CLDN6P56747 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CLDN6P56747 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
CLDN6P56747 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
CLDN6P56747 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC17.05■□□□□ 0.32
CLDN6P56747 COLEC11-202ENST00000349077 1259 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CLDN6P56747 BLOC1S2-202ENST00000370372 1249 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CLDN6P56747 PNRC2-202ENST00000374468 814 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
CLDN6P56747 ELK2BP-201ENST00000415014 1224 ntBASIC17.05■□□□□ 0.32
CLDN6P56747 MCCD1P2-201ENST00000423228 335 ntBASIC17.05■□□□□ 0.32
CLDN6P56747 WDR53-203ENST00000429115 683 ntTSL 2 BASIC17.05■□□□□ 0.32
CLDN6P56747 XXYLT1-204ENST00000429994 865 ntTSL 3 BASIC17.05■□□□□ 0.32
CLDN6P56747 AC005281.1-201ENST00000433040 911 ntTSL 5 BASIC17.05■□□□□ 0.32
CLDN6P56747 SHF-202ENST00000458022 1163 ntAPPRIS ALT2 TSL 2 BASIC17.05■□□□□ 0.32
CLDN6P56747 AC136632.2-201ENST00000512891 861 ntBASIC17.05■□□□□ 0.32
CLDN6P56747 ANKRD13D-218ENST00000515828 1111 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
CLDN6P56747 AC020558.1-201ENST00000583662 425 ntTSL 3 BASIC17.05■□□□□ 0.32
CLDN6P56747 AC007040.2-201ENST00000606025 4170 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
CLDN6P56747 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
CLDN6P56747 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC17.05■□□□□ 0.32
CLDN6P56747 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CLDN6P56747 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CLDN6P56747 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CLDN6P56747 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
CLDN6P56747 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
CLDN6P56747 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC17.05■□□□□ 0.32
CLDN6P56747 AL355315.1-201ENST00000370649 1848 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
CLDN6P56747 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC17.05■□□□□ 0.32
CLDN6P56747 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CLDN6P56747 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC17.05■□□□□ 0.32
CLDN6P56747 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CLDN6P56747 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
CLDN6P56747 MOV10L1-203ENST00000395852 1422 ntTSL 2 BASIC17.04■□□□□ 0.32
CLDN6P56747 PYCR1-217ENST00000629768 1740 ntTSL 5 BASIC17.04■□□□□ 0.32
CLDN6P56747 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
CLDN6P56747 AC093627.6-201ENST00000478759 1365 ntTSL 5 BASIC17.04■□□□□ 0.32
CLDN6P56747 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
CLDN6P56747 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC17.04■□□□□ 0.32
CLDN6P56747 DACH1-202ENST00000613252 5233 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
CLDN6P56747 PRICKLE4-204ENST00000458694 1646 ntAPPRIS P2 TSL 5 BASIC17.04■□□□□ 0.32
CLDN6P56747 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CLDN6P56747 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC17.04■□□□□ 0.32
CLDN6P56747 AC006504.4-201ENST00000592118 1568 ntBASIC17.04■□□□□ 0.32
CLDN6P56747 SEPT11-201ENST00000264893 5593 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
CLDN6P56747 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC17.04■□□□□ 0.32
CLDN6P56747 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
CLDN6P56747 HIST2H3D-201ENST00000331491 411 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
CLDN6P56747 CRADD-201ENST00000332896 1169 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CLDN6P56747 TMEM179B-201ENST00000333449 1023 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CLDN6P56747 PDLIM7-201ENST00000355572 977 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
CLDN6P56747 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
CLDN6P56747 HIST2H3PS2-201ENST00000392948 411 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
CLDN6P56747 SLC4A1APP2-201ENST00000424054 1259 ntBASIC17.04■□□□□ 0.32
CLDN6P56747 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC17.04■□□□□ 0.32
CLDN6P56747 AL110118.2-203ENST00000557574 554 ntAPPRIS P1 TSL 4 BASIC17.04■□□□□ 0.32
CLDN6P56747 AC027243.1-201ENST00000559539 758 ntTSL 3 BASIC17.04■□□□□ 0.32
CLDN6P56747 AC092384.3-201ENST00000561980 531 ntTSL 4 BASIC17.04■□□□□ 0.32
CLDN6P56747 AC024592.3-202ENST00000586349 506 ntTSL 2 BASIC17.04■□□□□ 0.32
CLDN6P56747 AC006557.2-201ENST00000592985 1240 ntBASIC17.04■□□□□ 0.32
CLDN6P56747 AC010615.2-202ENST00000597444 832 ntTSL 3 BASIC17.04■□□□□ 0.32
CLDN6P56747 CRB3-204ENST00000600229 1078 ntAPPRIS ALT2 TSL 2 BASIC17.04■□□□□ 0.32
CLDN6P56747 SMIM22-210ENST00000615471 928 ntAPPRIS ALT2 TSL 3 BASIC17.04■□□□□ 0.32
CLDN6P56747 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
CLDN6P56747 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
CLDN6P56747 WIPI2-211ENST00000484262 1504 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
CLDN6P56747 TBC1D3P5-201ENST00000579401 1545 ntBASIC17.04■□□□□ 0.32
CLDN6P56747 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
CLDN6P56747 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CLDN6P56747 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
CLDN6P56747 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
CLDN6P56747 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CLDN6P56747 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC17.03■□□□□ 0.32
CLDN6P56747 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
CLDN6P56747 PUF60-201ENST00000313352 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CLDN6P56747 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
CLDN6P56747 GRB10-208ENST00000403097 5432 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
CLDN6P56747 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC17.03■□□□□ 0.32
CLDN6P56747 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC17.03■□□□□ 0.32
CLDN6P56747 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
CLDN6P56747 TBC1D10C-203ENST00000526387 1520 ntTSL 2 BASIC17.03■□□□□ 0.32
CLDN6P56747 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC17.03■□□□□ 0.32
CLDN6P56747 PDCD2L-201ENST00000246535 1171 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CLDN6P56747 CD9-202ENST00000382515 1229 ntTSL 5 BASIC17.03■□□□□ 0.32
CLDN6P56747 GNB2-207ENST00000427895 1146 ntTSL 5 BASIC17.03■□□□□ 0.32
CLDN6P56747 AC005020.2-201ENST00000455905 830 ntAPPRIS P1 TSL 3 BASIC17.03■□□□□ 0.32
CLDN6P56747 SUMO2P17-202ENST00000508743 738 ntTSL 3 BASIC17.03■□□□□ 0.32
CLDN6P56747 MAL2-202ENST00000531508 892 ntTSL 3 BASIC17.03■□□□□ 0.32
CLDN6P56747 L2HGDH-206ENST00000555610 804 ntTSL 5 BASIC17.03■□□□□ 0.32
CLDN6P56747 AC126696.3-201ENST00000563993 575 ntTSL 4 BASIC17.03■□□□□ 0.32
CLDN6P56747 MIR4751-201ENST00000578027 74 ntBASIC17.03■□□□□ 0.32
CLDN6P56747 MIR3197-201ENST00000582241 73 ntBASIC17.03■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 30.2 ms