Protein–RNA interactions for Protein: P50613

CDK7, Cyclin-dependent kinase 7, humanhuman

Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK7P50613 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC19.64■□□□□ 0.73
CDK7P50613 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CDK7P50613 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC19.64■□□□□ 0.73
CDK7P50613 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CDK7P50613 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC19.63■□□□□ 0.73
CDK7P50613 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
CDK7P50613 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC19.63■□□□□ 0.73
CDK7P50613 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CDK7P50613 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CDK7P50613 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CDK7P50613 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC19.63■□□□□ 0.73
CDK7P50613 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC19.63■□□□□ 0.73
CDK7P50613 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
CDK7P50613 AC006504.4-201ENST00000592118 1568 ntBASIC19.63■□□□□ 0.73
CDK7P50613 PRKN-202ENST00000366892 1505 ntTSL 5 BASIC19.63■□□□□ 0.73
CDK7P50613 PPIC-201ENST00000306442 1380 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CDK7P50613 KRT8P47-201ENST00000604727 1398 ntBASIC19.63■□□□□ 0.73
CDK7P50613 C2orf27B-201ENST00000623129 1325 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
CDK7P50613 TYROBP-201ENST00000262629 568 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
CDK7P50613 AP4S1-202ENST00000313566 839 ntTSL 3 BASIC19.63■□□□□ 0.73
CDK7P50613 SIGLEC8-202ENST00000340550 1293 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
CDK7P50613 C6orf99-202ENST00000367073 769 ntTSL 5 BASIC19.63■□□□□ 0.73
CDK7P50613 WWOX-204ENST00000408984 1227 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
CDK7P50613 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC19.63■□□□□ 0.73
CDK7P50613 PON3-203ENST00000427422 894 ntTSL 3 BASIC19.63■□□□□ 0.73
CDK7P50613 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC19.63■□□□□ 0.73
CDK7P50613 PIGBOS1-201ENST00000436697 866 ntAPPRIS P2 TSL 2 BASIC19.63■□□□□ 0.73
CDK7P50613 VN2R19P-201ENST00000442399 1052 ntBASIC19.63■□□□□ 0.73
CDK7P50613 HCG4B-203ENST00000450128 991 ntBASIC19.63■□□□□ 0.73
CDK7P50613 HOXC-AS3-202ENST00000513165 533 ntTSL 3 BASIC19.63■□□□□ 0.73
CDK7P50613 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
CDK7P50613 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CDK7P50613 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
CDK7P50613 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CDK7P50613 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
CDK7P50613 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC19.62■□□□□ 0.73
CDK7P50613 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
CDK7P50613 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC19.62■□□□□ 0.73
CDK7P50613 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC19.62■□□□□ 0.73
CDK7P50613 INPP5J-204ENST00000402238 1564 ntTSL 2 BASIC19.62■□□□□ 0.73
CDK7P50613 OGFOD2-224ENST00000545612 1465 ntTSL 2 BASIC19.62■□□□□ 0.73
CDK7P50613 TLX2-204ENST00000621092 1452 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
CDK7P50613 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
CDK7P50613 MYL6-202ENST00000348108 722 ntAPPRIS ALT1 TSL 3 BASIC19.62■□□□□ 0.73
CDK7P50613 COPS7B-207ENST00000410024 1103 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
CDK7P50613 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC19.62■□□□□ 0.73
CDK7P50613 PON3-205ENST00000451904 1053 ntTSL 3 BASIC19.62■□□□□ 0.73
CDK7P50613 ARTN-206ENST00000472435 402 ntTSL 3 BASIC19.62■□□□□ 0.73
CDK7P50613 SWI5-205ENST00000495313 466 ntAPPRIS ALT2 TSL 3 BASIC19.62■□□□□ 0.73
CDK7P50613 HOXD8-204ENST00000544999 1235 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
CDK7P50613 AC008992.1-201ENST00000591132 446 ntTSL 2 BASIC19.62■□□□□ 0.73
CDK7P50613 AC073592.5-201ENST00000624854 528 ntBASIC19.62■□□□□ 0.73
CDK7P50613 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CDK7P50613 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CDK7P50613 AC004408.2-201ENST00000623613 2777 ntBASIC19.62■□□□□ 0.73
CDK7P50613 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CDK7P50613 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
CDK7P50613 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC19.62■□□□□ 0.73
CDK7P50613 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC19.62■□□□□ 0.73
CDK7P50613 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC19.62■□□□□ 0.73
CDK7P50613 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC19.62■□□□□ 0.73
CDK7P50613 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC19.62■□□□□ 0.73
CDK7P50613 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
CDK7P50613 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CDK7P50613 AC005082.1-201ENST00000413042 2259 ntBASIC19.62■□□□□ 0.73
CDK7P50613 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CDK7P50613 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CDK7P50613 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CDK7P50613 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CDK7P50613 AC093627.6-201ENST00000478759 1365 ntTSL 5 BASIC19.61■□□□□ 0.73
CDK7P50613 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
CDK7P50613 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
CDK7P50613 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CDK7P50613 YIF1B-203ENST00000339413 1225 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CDK7P50613 COX5BP2-201ENST00000392354 334 ntBASIC19.61■□□□□ 0.73
CDK7P50613 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC19.61■□□□□ 0.73
CDK7P50613 AL645939.2-201ENST00000427340 991 ntBASIC19.61■□□□□ 0.73
CDK7P50613 HTR5BP-201ENST00000430851 1154 ntBASIC19.61■□□□□ 0.73
CDK7P50613 MKNK2P1-201ENST00000437526 628 ntBASIC19.61■□□□□ 0.73
CDK7P50613 AKIRIN1-203ENST00000446189 1243 ntTSL 2 BASIC19.61■□□□□ 0.73
CDK7P50613 MOK-203ENST00000517966 1230 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
CDK7P50613 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC19.61■□□□□ 0.73
CDK7P50613 CYB561-217ENST00000582997 877 ntTSL 5 BASIC19.61■□□□□ 0.73
CDK7P50613 OR5AH1P-202ENST00000597822 431 ntTSL 3 BASIC19.61■□□□□ 0.73
CDK7P50613 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC19.61■□□□□ 0.73
CDK7P50613 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CDK7P50613 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC19.61■□□□□ 0.73
CDK7P50613 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CDK7P50613 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
CDK7P50613 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC19.61■□□□□ 0.73
CDK7P50613 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC19.61■□□□□ 0.73
CDK7P50613 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC19.61■□□□□ 0.73
CDK7P50613 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CDK7P50613 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
CDK7P50613 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC19.61■□□□□ 0.73
CDK7P50613 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CDK7P50613 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC19.61■□□□□ 0.73
CDK7P50613 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC19.61■□□□□ 0.73
CDK7P50613 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC19.61■□□□□ 0.73
CDK7P50613 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 46.6 ms