Protein–RNA interactions for Protein: P39059

COL15A1, Collagen alpha-1(XV) chain, humanhuman

Predictions only

Length 1,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL15A1P39059 ADAD1-203ENST00000388725 1918 ntTSL 2 BASIC22.47■■□□□ 1.19
COL15A1P39059 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC22.47■■□□□ 1.19
COL15A1P39059 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
COL15A1P39059 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
COL15A1P39059 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC22.46■■□□□ 1.19
COL15A1P39059 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC22.46■■□□□ 1.19
COL15A1P39059 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC22.46■■□□□ 1.19
COL15A1P39059 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
COL15A1P39059 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC22.46■■□□□ 1.19
COL15A1P39059 AL096828.2-201ENST00000567259 1965 ntBASIC22.46■■□□□ 1.19
COL15A1P39059 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC22.46■■□□□ 1.19
COL15A1P39059 AC022898.2-201ENST00000616822 1312 ntBASIC22.46■■□□□ 1.19
COL15A1P39059 SZT2-202ENST00000372450 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC22.46■■□□□ 1.19
COL15A1P39059 AC018845.2-201ENST00000568326 409 ntBASIC22.46■■□□□ 1.19
COL15A1P39059 AC005829.1-201ENST00000570002 483 ntBASIC22.46■■□□□ 1.19
COL15A1P39059 TNFRSF13B-203ENST00000579315 600 ntAPPRIS ALT2 TSL 3 BASIC22.46■■□□□ 1.19
COL15A1P39059 RPS15-207ENST00000591032 550 ntTSL 3 BASIC22.46■■□□□ 1.19
COL15A1P39059 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
COL15A1P39059 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC22.46■■□□□ 1.19
COL15A1P39059 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC22.46■■□□□ 1.19
COL15A1P39059 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
COL15A1P39059 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC22.45■■□□□ 1.18
COL15A1P39059 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
COL15A1P39059 PHYHD1-201ENST00000308941 1599 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
COL15A1P39059 ACP6-201ENST00000392988 1555 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
COL15A1P39059 AL445238.1-203ENST00000606050 1525 ntTSL 2 BASIC22.45■■□□□ 1.18
COL15A1P39059 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC22.45■■□□□ 1.18
COL15A1P39059 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
COL15A1P39059 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC22.45■■□□□ 1.18
COL15A1P39059 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC22.45■■□□□ 1.18
COL15A1P39059 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
COL15A1P39059 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC22.45■■□□□ 1.18
COL15A1P39059 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC22.45■■□□□ 1.18
COL15A1P39059 CRYGEP-201ENST00000412192 528 ntBASIC22.45■■□□□ 1.18
COL15A1P39059 KLF4P1-201ENST00000412782 1185 ntBASIC22.45■■□□□ 1.18
COL15A1P39059 MIR4469-201ENST00000583919 79 ntBASIC22.45■■□□□ 1.18
COL15A1P39059 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC22.45■■□□□ 1.18
COL15A1P39059 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC22.45■■□□□ 1.18
COL15A1P39059 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
COL15A1P39059 EFTUD1P1-204ENST00000560401 1798 ntBASIC22.45■■□□□ 1.18
COL15A1P39059 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC22.45■■□□□ 1.18
COL15A1P39059 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC22.45■■□□□ 1.18
COL15A1P39059 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC22.44■■□□□ 1.18
COL15A1P39059 AL049757.1-201ENST00000616842 1596 ntBASIC22.44■■□□□ 1.18
COL15A1P39059 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
COL15A1P39059 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC22.44■■□□□ 1.18
COL15A1P39059 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
COL15A1P39059 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC22.44■■□□□ 1.18
COL15A1P39059 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
COL15A1P39059 AC093627.6-201ENST00000478759 1365 ntTSL 5 BASIC22.44■■□□□ 1.18
COL15A1P39059 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
COL15A1P39059 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC22.44■■□□□ 1.18
COL15A1P39059 METTL26-201ENST00000301686 794 ntAPPRIS P1 TSL 2 BASIC22.44■■□□□ 1.18
COL15A1P39059 AP4S1-202ENST00000313566 839 ntTSL 3 BASIC22.44■■□□□ 1.18
COL15A1P39059 HIST1H2BD-202ENST00000377777 496 ntAPPRIS P1 BASIC22.44■■□□□ 1.18
COL15A1P39059 PRORY-201ENST00000382764 878 ntAPPRIS P1 TSL 5 BASIC22.44■■□□□ 1.18
COL15A1P39059 METTL26-205ENST00000397666 726 ntTSL 2 BASIC22.44■■□□□ 1.18
COL15A1P39059 HYAL1-206ENST00000447605 666 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
COL15A1P39059 HCG4B-203ENST00000450128 991 ntBASIC22.44■■□□□ 1.18
COL15A1P39059 BX890604.1-208ENST00000490920 726 ntTSL 2 BASIC22.44■■□□□ 1.18
COL15A1P39059 CFL1-202ENST00000524553 860 ntTSL 2 BASIC22.44■■□□□ 1.18
COL15A1P39059 HOPX-214ENST00000556614 1138 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
COL15A1P39059 LINC00668-203ENST00000579012 605 ntTSL 3 BASIC22.44■■□□□ 1.18
COL15A1P39059 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC22.44■■□□□ 1.18
COL15A1P39059 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC22.44■■□□□ 1.18
COL15A1P39059 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
COL15A1P39059 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC22.44■■□□□ 1.18
COL15A1P39059 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC22.44■■□□□ 1.18
COL15A1P39059 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC22.43■■□□□ 1.18
COL15A1P39059 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
COL15A1P39059 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
COL15A1P39059 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
COL15A1P39059 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC22.43■■□□□ 1.18
COL15A1P39059 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
COL15A1P39059 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
COL15A1P39059 KRT18P28-201ENST00000453838 1332 ntBASIC22.43■■□□□ 1.18
COL15A1P39059 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC22.43■■□□□ 1.18
COL15A1P39059 CYP2D6-203ENST00000360608 1684 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
COL15A1P39059 RPS17-201ENST00000330244 592 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
COL15A1P39059 DNAJC4-203ENST00000355040 759 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
COL15A1P39059 GUCA2A-201ENST00000357001 569 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
COL15A1P39059 GUK1-203ENST00000366718 1275 ntAPPRIS P3 TSL 3 BASIC22.43■■□□□ 1.18
COL15A1P39059 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC22.43■■□□□ 1.18
COL15A1P39059 AC005020.2-201ENST00000455905 830 ntAPPRIS P1 TSL 3 BASIC22.43■■□□□ 1.18
COL15A1P39059 AL669831.5-202ENST00000457084 566 ntTSL 4 BASIC22.43■■□□□ 1.18
COL15A1P39059 AC091133.2-201ENST00000505903 428 ntTSL 3 BASIC22.43■■□□□ 1.18
COL15A1P39059 AC025183.1-201ENST00000506335 425 ntTSL 4 BASIC22.43■■□□□ 1.18
COL15A1P39059 MRVI1-AS1-203ENST00000529979 784 ntTSL 3 BASIC22.43■■□□□ 1.18
COL15A1P39059 HOXD8-204ENST00000544999 1235 ntAPPRIS ALT2 TSL 5 BASIC22.43■■□□□ 1.18
COL15A1P39059 SPAG7-207ENST00000575142 1094 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
COL15A1P39059 LINC02084-201ENST00000606069 1096 ntBASIC22.43■■□□□ 1.18
COL15A1P39059 AL513190.1-201ENST00000621254 727 ntBASIC22.43■■□□□ 1.18
COL15A1P39059 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
COL15A1P39059 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
COL15A1P39059 BCS1L-204ENST00000392111 1584 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
COL15A1P39059 INPP5J-204ENST00000402238 1564 ntTSL 2 BASIC22.43■■□□□ 1.18
COL15A1P39059 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC22.43■■□□□ 1.18
COL15A1P39059 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC22.43■■□□□ 1.18
COL15A1P39059 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC22.43■■□□□ 1.18
COL15A1P39059 PUF60-201ENST00000313352 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC22.43■■□□□ 1.18
Retrieved 100 of 98,524 protein–RNA pairs in 29.8 ms