Protein–RNA interactions for Protein: P35523

CLCN1, Chloride channel protein 1, humanhuman

Predictions only

Length 988 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN1P35523 FHL1-207ENST00000394155 2706 ntTSL 5 BASIC20.31■□□□□ 0.84
CLCN1P35523 EFR3A-201ENST00000254624 5438 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CLCN1P35523 PODXL-201ENST00000322985 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
CLCN1P35523 AP5B1-201ENST00000532090 4811 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CLCN1P35523 LYSMD4-203ENST00000378904 2122 ntBASIC20.3■□□□□ 0.84
CLCN1P35523 C20orf27-201ENST00000217195 1302 ntTSL 2 BASIC20.3■□□□□ 0.84
CLCN1P35523 MTA1-203ENST00000406191 2770 ntAPPRIS P5 TSL 2 BASIC20.3■□□□□ 0.84
CLCN1P35523 GPR137-204ENST00000438980 1596 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CLCN1P35523 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CLCN1P35523 QRICH1-202ENST00000395443 3549 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CLCN1P35523 GPAT2-204ENST00000453542 2466 ntTSL 2 BASIC20.3■□□□□ 0.84
CLCN1P35523 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CLCN1P35523 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CLCN1P35523 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CLCN1P35523 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC20.3■□□□□ 0.84
CLCN1P35523 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CLCN1P35523 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC20.3■□□□□ 0.84
CLCN1P35523 MESTP1-201ENST00000404287 994 ntBASIC20.3■□□□□ 0.84
CLCN1P35523 FAM197Y1-201ENST00000421178 764 ntBASIC20.3■□□□□ 0.84
CLCN1P35523 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
CLCN1P35523 UBE2SP1-201ENST00000450587 669 ntBASIC20.3■□□□□ 0.84
CLCN1P35523 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC20.3■□□□□ 0.84
CLCN1P35523 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC20.3■□□□□ 0.84
CLCN1P35523 BLOC1S5-202ENST00000397457 2684 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CLCN1P35523 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CLCN1P35523 DYDC2-202ENST00000372197 2022 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
CLCN1P35523 ELF2-201ENST00000358635 3036 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
CLCN1P35523 KAZN-203ENST00000376030 6030 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
CLCN1P35523 CD68-201ENST00000250092 1878 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
CLCN1P35523 TUBB-206ENST00000330914 2632 ntTSL 2 BASIC20.3■□□□□ 0.84
CLCN1P35523 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CLCN1P35523 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC20.3■□□□□ 0.84
CLCN1P35523 APLN-201ENST00000429967 3205 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CLCN1P35523 DDX1-201ENST00000233084 2739 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CLCN1P35523 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC20.3■□□□□ 0.84
CLCN1P35523 TUBGCP2-202ENST00000368562 2685 ntTSL 2 BASIC20.3■□□□□ 0.84
CLCN1P35523 FDFT1-224ENST00000618539 2660 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
CLCN1P35523 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC20.29■□□□□ 0.84
CLCN1P35523 CEP76-202ENST00000423709 2197 ntTSL 2 BASIC20.29■□□□□ 0.84
CLCN1P35523 SLC29A1-209ENST00000427851 2171 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CLCN1P35523 PBX3-207ENST00000447726 2789 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
CLCN1P35523 FAM129B-201ENST00000373312 3957 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CLCN1P35523 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
CLCN1P35523 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC20.29■□□□□ 0.84
CLCN1P35523 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CLCN1P35523 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
CLCN1P35523 TNFRSF10A-201ENST00000221132 2714 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CLCN1P35523 OSBP2-211ENST00000446658 2836 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
CLCN1P35523 NTRK3-202ENST00000355254 2938 ntAPPRIS ALT2 TSL 5 BASIC20.29■□□□□ 0.84
CLCN1P35523 NSD3-201ENST00000316985 3995 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
CLCN1P35523 ENC1-205ENST00000510316 5381 ntTSL 2 BASIC20.29■□□□□ 0.84
CLCN1P35523 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
CLCN1P35523 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC20.29■□□□□ 0.84
CLCN1P35523 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC20.29■□□□□ 0.84
CLCN1P35523 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CLCN1P35523 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC20.29■□□□□ 0.84
CLCN1P35523 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
CLCN1P35523 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
CLCN1P35523 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
CLCN1P35523 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC20.29■□□□□ 0.84
CLCN1P35523 TESMIN-209ENST00000544963 1235 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
CLCN1P35523 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
CLCN1P35523 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC20.29■□□□□ 0.84
CLCN1P35523 AC026271.3-201ENST00000571884 352 ntBASIC20.29■□□□□ 0.84
CLCN1P35523 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC20.29■□□□□ 0.84
CLCN1P35523 CSNK1A1L-201ENST00000379800 2406 ntAPPRIS P1 BASIC20.29■□□□□ 0.84
CLCN1P35523 NDUFA11-205ENST00000592634 2154 ntTSL 2 BASIC20.29■□□□□ 0.84
CLCN1P35523 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CLCN1P35523 PHKA2-201ENST00000379942 5559 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CLCN1P35523 CES3-203ENST00000543856 3178 ntTSL 2 BASIC20.29■□□□□ 0.84
CLCN1P35523 PLEKHB1-202ENST00000354190 2380 ntAPPRIS P4 TSL 1 (best) BASIC20.29■□□□□ 0.84
CLCN1P35523 CRY1-201ENST00000008527 3267 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CLCN1P35523 CSNK1A1-202ENST00000377843 2559 ntAPPRIS ALT1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CLCN1P35523 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CLCN1P35523 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
CLCN1P35523 NAGPA-201ENST00000312251 2202 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CLCN1P35523 PCDH7-201ENST00000361762 6403 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
CLCN1P35523 EGFR-203ENST00000344576 2864 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
CLCN1P35523 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC20.28■□□□□ 0.84
CLCN1P35523 LMTK2-201ENST00000297293 8946 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CLCN1P35523 OR6D1P-202ENST00000641007 5290 ntBASIC20.28■□□□□ 0.84
CLCN1P35523 AL096828.2-201ENST00000567259 1965 ntBASIC20.28■□□□□ 0.84
CLCN1P35523 LIFR-202ENST00000453190 4253 ntAPPRIS P1 TSL 2 BASIC20.28■□□□□ 0.84
CLCN1P35523 PSMD2-201ENST00000310118 3449 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CLCN1P35523 CD19-201ENST00000324662 1932 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
CLCN1P35523 CRAT-201ENST00000318080 2763 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CLCN1P35523 LONRF3-201ENST00000304778 2989 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
CLCN1P35523 LYPD1-201ENST00000345008 1033 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
CLCN1P35523 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
CLCN1P35523 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC20.28■□□□□ 0.84
CLCN1P35523 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC20.28■□□□□ 0.84
CLCN1P35523 OVCH1-AS1-203ENST00000551108 963 ntTSL 2 BASIC20.28■□□□□ 0.84
CLCN1P35523 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC20.28■□□□□ 0.84
CLCN1P35523 CD177P1-201ENST00000606252 935 ntBASIC20.28■□□□□ 0.84
CLCN1P35523 AC011298.2-201ENST00000617989 482 ntBASIC20.28■□□□□ 0.84
CLCN1P35523 CNTNAP3-204ENST00000377656 4986 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
CLCN1P35523 TRIM7-204ENST00000393319 2320 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
CLCN1P35523 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CLCN1P35523 MAP7-209ENST00000618822 4497 ntAPPRIS ALT2 TSL 5 BASIC20.28■□□□□ 0.84
CLCN1P35523 ZYG11A-202ENST00000371532 3942 ntTSL 5 BASIC20.28■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 23.9 ms