Protein–RNA interactions for Protein: P29965

CD40LG, CD40 ligand, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD40LGP29965 AC073210.2-201ENST00000430369 194 ntBASIC15.82■□□□□ 0.12
CD40LGP29965 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC15.82■□□□□ 0.12
CD40LGP29965 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC15.82■□□□□ 0.12
CD40LGP29965 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
CD40LGP29965 MARS-234ENST00000630571 216 ntTSL 5 BASIC15.82■□□□□ 0.12
CD40LGP29965 MARS-235ENST00000630803 183 ntTSL 3 BASIC15.82■□□□□ 0.12
CD40LGP29965 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC15.82■□□□□ 0.12
CD40LGP29965 FAM76B-201ENST00000358780 3952 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
CD40LGP29965 PXK-204ENST00000383716 3035 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
CD40LGP29965 EGFL7-204ENST00000406555 1529 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CD40LGP29965 REPS1-201ENST00000258062 3161 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
CD40LGP29965 NRXN1-229ENST00000628515 3243 ntTSL 5 BASIC15.82■□□□□ 0.12
CD40LGP29965 AC007743.1-203ENST00000447423 1623 ntTSL 2 BASIC15.82■□□□□ 0.12
CD40LGP29965 ZCCHC3-201ENST00000500893 3354 ntAPPRIS P1 BASIC15.82■□□□□ 0.12
CD40LGP29965 MDGA2-202ENST00000399232 5075 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
CD40LGP29965 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC15.82■□□□□ 0.12
CD40LGP29965 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC15.82■□□□□ 0.12
CD40LGP29965 SP100-208ENST00000427101 1922 ntTSL 2 BASIC15.82■□□□□ 0.12
CD40LGP29965 SLC3A2-203ENST00000377890 2161 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
CD40LGP29965 SLC25A45-202ENST00000398802 2286 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
CD40LGP29965 DLGAP1-220ENST00000581699 2258 ntTSL 2 BASIC15.82■□□□□ 0.12
CD40LGP29965 MBNL1-201ENST00000282486 6422 ntAPPRIS P4 TSL 5 BASIC15.81■□□□□ 0.12
CD40LGP29965 ADRA2A-201ENST00000280155 3745 ntAPPRIS P1 BASIC15.81■□□□□ 0.12
CD40LGP29965 ZNF764-201ENST00000252797 2738 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
CD40LGP29965 CACNB3-201ENST00000301050 2696 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CD40LGP29965 ACAD9-201ENST00000308982 2454 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CD40LGP29965 B3GNT3-201ENST00000318683 2226 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CD40LGP29965 EGFR-203ENST00000344576 2864 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
CD40LGP29965 KLC4-202ENST00000347162 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
CD40LGP29965 POLR3E-202ENST00000359210 2469 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
CD40LGP29965 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC15.81■□□□□ 0.12
CD40LGP29965 RALGPS1-203ENST00000373434 2466 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
CD40LGP29965 MAPKAP1-206ENST00000373511 3252 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
CD40LGP29965 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC15.81■□□□□ 0.12
CD40LGP29965 ELK1-203ENST00000376983 2258 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
CD40LGP29965 RIC8B-203ENST00000392839 2440 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
CD40LGP29965 RNF121-203ENST00000393713 2132 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
CD40LGP29965 BCAT2-202ENST00000402551 2041 ntTSL 2 BASIC15.81■□□□□ 0.12
CD40LGP29965 COL23A1-202ENST00000407622 2329 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
CD40LGP29965 SLC5A6-203ENST00000408041 2230 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CD40LGP29965 DAGLB-202ENST00000425398 2044 ntTSL 2 BASIC15.81■□□□□ 0.12
CD40LGP29965 DUSP5P2-201ENST00000426873 1033 ntBASIC15.81■□□□□ 0.12
CD40LGP29965 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC15.81■□□□□ 0.12
CD40LGP29965 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC15.81■□□□□ 0.12
CD40LGP29965 SERP1-205ENST00000487153 657 ntTSL 4 BASIC15.81■□□□□ 0.12
CD40LGP29965 C12orf42-208ENST00000548883 1336 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
CD40LGP29965 ATXN2-219ENST00000550104 4648 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
CD40LGP29965 CFL2-205ENST00000555765 632 ntTSL 2 BASIC15.81■□□□□ 0.12
CD40LGP29965 TMC3-AS1-203ENST00000559781 2195 ntTSL 3 BASIC15.81■□□□□ 0.12
CD40LGP29965 SLC17A7-204ENST00000600601 2237 ntTSL 2 BASIC15.81■□□□□ 0.12
CD40LGP29965 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC15.81■□□□□ 0.12
CD40LGP29965 SUZ12-201ENST00000322652 4491 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CD40LGP29965 ST3GAL2-201ENST00000342907 4450 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
CD40LGP29965 SFXN1-201ENST00000321442 4231 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CD40LGP29965 AK5-203ENST00000354567 3251 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CD40LGP29965 SOWAHB-201ENST00000334306 3220 ntAPPRIS P1 BASIC15.81■□□□□ 0.12
CD40LGP29965 PRDM5-202ENST00000394435 2492 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
CD40LGP29965 PDE1C-202ENST00000396182 2420 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
CD40LGP29965 CTDSP2-201ENST00000398073 4795 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CD40LGP29965 ST3GAL5-229ENST00000638986 2331 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
CD40LGP29965 ETFA-203ENST00000557943 2287 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CD40LGP29965 FAM184B-201ENST00000265018 6622 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CD40LGP29965 COL18A1-203ENST00000359759 6586 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
CD40LGP29965 MAGI3-203ENST00000369615 6508 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
CD40LGP29965 NUCB1-202ENST00000407032 2158 ntAPPRIS P2 TSL 5 BASIC15.8■□□□□ 0.12
CD40LGP29965 DGKZ-202ENST00000343674 3816 ntAPPRIS P3 TSL 2 BASIC15.8■□□□□ 0.12
CD40LGP29965 ADCYAP1R1-203ENST00000409363 1889 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
CD40LGP29965 LINC00905-202ENST00000588117 1768 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
CD40LGP29965 DCAF8-218ENST00000610139 1607 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
CD40LGP29965 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC15.8■□□□□ 0.12
CD40LGP29965 ARHGEF40-201ENST00000298694 5919 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
CD40LGP29965 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CD40LGP29965 CRK-204ENST00000574295 1391 ntTSL 5 BASIC15.8■□□□□ 0.12
CD40LGP29965 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC15.8■□□□□ 0.12
CD40LGP29965 HTR7P1-201ENST00000538670 1336 ntBASIC15.8■□□□□ 0.12
CD40LGP29965 NENF-201ENST00000366988 949 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CD40LGP29965 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CD40LGP29965 MPV17L-202ENST00000396385 1037 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CD40LGP29965 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
CD40LGP29965 TUBB8P6-201ENST00000436895 1288 ntBASIC15.8■□□□□ 0.12
CD40LGP29965 AC069152.1-201ENST00000438030 544 ntBASIC15.8■□□□□ 0.12
CD40LGP29965 LINC01962-201ENST00000513771 411 ntTSL 2 BASIC15.8■□□□□ 0.12
CD40LGP29965 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC15.8■□□□□ 0.12
CD40LGP29965 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
CD40LGP29965 LINC01270-201ENST00000371639 2281 ntTSL 2 BASIC15.8■□□□□ 0.12
CD40LGP29965 PPP3CA-201ENST00000323055 4519 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
CD40LGP29965 AFTPH-201ENST00000238855 4113 ntAPPRIS ALT1 TSL 5 BASIC15.8■□□□□ 0.12
CD40LGP29965 IQCF5-AS1-201ENST00000440723 2000 ntTSL 2 BASIC15.8■□□□□ 0.12
CD40LGP29965 TSPY26P-202ENST00000565928 3884 ntBASIC15.8■□□□□ 0.12
CD40LGP29965 STKLD1-201ENST00000371957 2825 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CD40LGP29965 EIF4ENIF1-206ENST00000397525 3695 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CD40LGP29965 RASA2-202ENST00000452898 2562 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
CD40LGP29965 MAPK3-212ENST00000484663 2567 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
CD40LGP29965 PDX1-201ENST00000381033 2501 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CD40LGP29965 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC15.79■□□□□ 0.12
CD40LGP29965 TRIM9-202ENST00000338969 3312 ntTSL 2 BASIC15.79■□□□□ 0.12
CD40LGP29965 GGT5-203ENST00000398292 2408 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
CD40LGP29965 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC15.79■□□□□ 0.12
CD40LGP29965 IFT140-201ENST00000361339 2987 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
CD40LGP29965 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 22 ms