Protein–RNA interactions for Protein: P22736

NR4A1, Nuclear receptor subfamily 4 group A member 1, humanhuman

Predictions only

Length 598 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR4A1P22736 ST3GAL2-201ENST00000342907 4450 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
NR4A1P22736 PDZD8-201ENST00000334464 9699 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
NR4A1P22736 CHST14-201ENST00000306243 3574 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
NR4A1P22736 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
NR4A1P22736 CNTNAP3-201ENST00000297668 5064 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
NR4A1P22736 RIF1-204ENST00000430328 7992 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
NR4A1P22736 KDM6A-212ENST00000543216 5655 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
NR4A1P22736 TRA2A-202ENST00000392502 2229 ntAPPRIS ALT2 TSL 2 BASIC16.6■□□□□ 0.25
NR4A1P22736 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC16.6■□□□□ 0.25
NR4A1P22736 HYAL3-203ENST00000415204 959 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
NR4A1P22736 ADCYAP1-202ENST00000450565 918 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
NR4A1P22736 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
NR4A1P22736 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC16.6■□□□□ 0.25
NR4A1P22736 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC16.6■□□□□ 0.25
NR4A1P22736 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC16.6■□□□□ 0.25
NR4A1P22736 AP000525.1-201ENST00000608286 694 ntBASIC16.6■□□□□ 0.25
NR4A1P22736 AP000692.2-201ENST00000608391 879 ntBASIC16.6■□□□□ 0.25
NR4A1P22736 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC16.6■□□□□ 0.25
NR4A1P22736 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
NR4A1P22736 CLPTM1-203ENST00000546079 2342 ntTSL 2 BASIC16.6■□□□□ 0.25
NR4A1P22736 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC16.6■□□□□ 0.25
NR4A1P22736 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC16.6■□□□□ 0.25
NR4A1P22736 DNAAF2-201ENST00000298292 2963 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
NR4A1P22736 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC16.6■□□□□ 0.25
NR4A1P22736 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC16.6■□□□□ 0.25
NR4A1P22736 PELI2-201ENST00000267460 5909 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
NR4A1P22736 KLF10-202ENST00000395884 3659 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
NR4A1P22736 MED17-201ENST00000251871 5142 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
NR4A1P22736 SAP130-202ENST00000259235 4065 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
NR4A1P22736 SLC4A3-204ENST00000373760 4134 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
NR4A1P22736 FOXA1-201ENST00000250448 2862 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
NR4A1P22736 SSH3-201ENST00000308127 2871 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
NR4A1P22736 MAP3K11-201ENST00000309100 3566 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
NR4A1P22736 MEGF9-201ENST00000373930 6298 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
NR4A1P22736 PRKAR2B-201ENST00000265717 3745 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
NR4A1P22736 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC16.59■□□□□ 0.25
NR4A1P22736 SLC9A7-201ENST00000328306 3838 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
NR4A1P22736 SPDEF-201ENST00000374037 1895 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
NR4A1P22736 TK2-207ENST00000544898 3441 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
NR4A1P22736 ZNF256-202ENST00000598928 1958 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
NR4A1P22736 PHRF1-202ENST00000413872 5224 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
NR4A1P22736 AC008556.1-201ENST00000610908 2040 ntBASIC16.59■□□□□ 0.25
NR4A1P22736 SUZ12-201ENST00000322652 4491 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
NR4A1P22736 BCAR1-206ENST00000535626 2894 ntTSL 2 BASIC16.59■□□□□ 0.25
NR4A1P22736 BAIAP2L2-201ENST00000332536 2065 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
NR4A1P22736 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
NR4A1P22736 MMP23A-201ENST00000234610 1017 ntBASIC16.59■□□□□ 0.25
NR4A1P22736 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
NR4A1P22736 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
NR4A1P22736 PTS-201ENST00000280362 935 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
NR4A1P22736 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
NR4A1P22736 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
NR4A1P22736 FAM207BP-201ENST00000447172 505 ntBASIC16.59■□□□□ 0.25
NR4A1P22736 AC008040.2-201ENST00000461049 708 ntBASIC16.59■□□□□ 0.25
NR4A1P22736 LINC00336-201ENST00000477984 2107 ntTSL 2 BASIC16.59■□□□□ 0.25
NR4A1P22736 TMUB1-205ENST00000482202 899 ntAPPRIS P1 TSL 3 BASIC16.59■□□□□ 0.25
NR4A1P22736 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
NR4A1P22736 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
NR4A1P22736 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
NR4A1P22736 CDC42EP4-201ENST00000335793 3272 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
NR4A1P22736 CENPN-202ENST00000305850 2481 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
NR4A1P22736 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC16.59■□□□□ 0.25
NR4A1P22736 KRT8P41-201ENST00000533985 1514 ntBASIC16.59■□□□□ 0.25
NR4A1P22736 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC16.59■□□□□ 0.25
NR4A1P22736 NUTM2F-201ENST00000253262 2561 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
NR4A1P22736 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC16.59■□□□□ 0.25
NR4A1P22736 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC16.59■□□□□ 0.25
NR4A1P22736 CCNA2-201ENST00000274026 2797 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
NR4A1P22736 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC16.59■□□□□ 0.25
NR4A1P22736 MTDH-201ENST00000336273 6177 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
NR4A1P22736 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
NR4A1P22736 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
NR4A1P22736 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC16.58■□□□□ 0.25
NR4A1P22736 BBS5-201ENST00000295240 3475 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
NR4A1P22736 ADAMTS13-206ENST00000371929 4934 ntAPPRIS P4 TSL 1 (best) BASIC16.58■□□□□ 0.25
NR4A1P22736 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
NR4A1P22736 ZNF18-204ENST00000580306 2330 ntAPPRIS P3 TSL 2 BASIC16.58■□□□□ 0.25
NR4A1P22736 CXorf38-202ENST00000378421 2380 ntTSL 2 BASIC16.58■□□□□ 0.25
NR4A1P22736 CHAT-201ENST00000337653 2458 ntAPPRIS P4 TSL 1 (best) BASIC16.58■□□□□ 0.25
NR4A1P22736 DKFZP434K028-202ENST00000536405 2466 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
NR4A1P22736 FAM210A-201ENST00000322247 4340 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.25
NR4A1P22736 ASPH-211ENST00000518068 2744 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
NR4A1P22736 HGS-201ENST00000329138 2970 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
NR4A1P22736 MICALL2-201ENST00000297508 3121 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
NR4A1P22736 C2CD4A-201ENST00000355522 3445 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
NR4A1P22736 HCRT-201ENST00000293330 577 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
NR4A1P22736 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC16.58■□□□□ 0.24
NR4A1P22736 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC16.58■□□□□ 0.24
NR4A1P22736 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
NR4A1P22736 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
NR4A1P22736 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
NR4A1P22736 MIR1238-201ENST00000408483 83 ntBASIC16.58■□□□□ 0.24
NR4A1P22736 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
NR4A1P22736 AC097488.1-201ENST00000507834 756 ntBASIC16.58■□□□□ 0.24
NR4A1P22736 RPS20-210ENST00000523936 899 ntTSL 2 BASIC16.58■□□□□ 0.24
NR4A1P22736 FITM1-202ENST00000559294 800 ntBASIC16.58■□□□□ 0.24
NR4A1P22736 ARL16-209ENST00000573715 763 ntTSL 3 BASIC16.58■□□□□ 0.24
NR4A1P22736 ARL16-211ENST00000576135 694 ntTSL 3 BASIC16.58■□□□□ 0.24
NR4A1P22736 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC16.58■□□□□ 0.24
NR4A1P22736 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC16.58■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 34.7 ms