Protein–RNA interactions for Protein: O95219

SNX4, Sorting nexin-4, humanhuman

Predictions only

Length 450 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX4O95219 CBSL-202ENST00000617706 2563 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
SNX4O95219 METTL21A-203ENST00000411432 4805 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
SNX4O95219 RAB22A-201ENST00000244040 8670 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
SNX4O95219 PLEKHG4-205ENST00000450733 4480 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
SNX4O95219 UBE2C-204ENST00000356455 850 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
SNX4O95219 BEX1-201ENST00000372728 864 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
SNX4O95219 MIR662-201ENST00000384847 95 ntBASIC16.79■□□□□ 0.28
SNX4O95219 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC16.79■□□□□ 0.28
SNX4O95219 AC093901.1-201ENST00000414886 778 ntTSL 5 BASIC16.79■□□□□ 0.28
SNX4O95219 AL645929.1-201ENST00000420084 975 ntBASIC16.79■□□□□ 0.28
SNX4O95219 TMEM243-203ENST00000433078 1273 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
SNX4O95219 MYD88-206ENST00000443433 914 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
SNX4O95219 LINC02106-201ENST00000506534 606 ntTSL 2 BASIC16.79■□□□□ 0.28
SNX4O95219 LINC02317-201ENST00000555413 426 ntTSL 3 BASIC16.79■□□□□ 0.28
SNX4O95219 AC140504.1-202ENST00000568222 652 ntTSL 5 BASIC16.79■□□□□ 0.28
SNX4O95219 FXYD7-203ENST00000586063 456 ntAPPRIS ALT2 TSL 3 BASIC16.79■□□□□ 0.28
SNX4O95219 AC008687.5-201ENST00000593746 558 ntBASIC16.79■□□□□ 0.28
SNX4O95219 AC116407.4-201ENST00000623319 1061 ntBASIC16.79■□□□□ 0.28
SNX4O95219 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
SNX4O95219 PRPF19-201ENST00000227524 2157 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
SNX4O95219 DUSP4-201ENST00000240100 5537 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
SNX4O95219 CAMK2G-205ENST00000372765 1822 ntTSL 5 BASIC16.79■□□□□ 0.28
SNX4O95219 EIF4G3-205ENST00000400422 5762 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
SNX4O95219 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
SNX4O95219 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
SNX4O95219 SENP5-201ENST00000323460 6308 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
SNX4O95219 CA7-202ENST00000394069 1713 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
SNX4O95219 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC16.79■□□□□ 0.28
SNX4O95219 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC16.79■□□□□ 0.28
SNX4O95219 MEPCE-201ENST00000310512 3030 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
SNX4O95219 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
SNX4O95219 MYH14-202ENST00000376970 6787 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
SNX4O95219 LURAP1-201ENST00000371980 1854 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
SNX4O95219 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC16.78■□□□□ 0.28
SNX4O95219 ADGRB2-201ENST00000373655 5400 ntAPPRIS P4 TSL 1 (best) BASIC16.78■□□□□ 0.28
SNX4O95219 HSD17B10-201ENST00000168216 960 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
SNX4O95219 ISCA1-202ENST00000326094 1264 ntTSL 3 BASIC16.78■□□□□ 0.28
SNX4O95219 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC16.78■□□□□ 0.28
SNX4O95219 C16orf91-201ENST00000442039 978 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
SNX4O95219 DMKN-212ENST00000443640 842 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
SNX4O95219 SPDYE13P-201ENST00000445314 798 ntBASIC16.78■□□□□ 0.28
SNX4O95219 PTK2-216ENST00000519881 863 ntTSL 3 BASIC16.78■□□□□ 0.28
SNX4O95219 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC16.78■□□□□ 0.28
SNX4O95219 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC16.78■□□□□ 0.28
SNX4O95219 CLDN7-204ENST00000571881 735 ntTSL 3 BASIC16.78■□□□□ 0.28
SNX4O95219 NAA38-203ENST00000575071 553 ntTSL 2 BASIC16.78■□□□□ 0.28
SNX4O95219 USF2-205ENST00000594064 1179 ntTSL 2 BASIC16.78■□□□□ 0.28
SNX4O95219 AC027682.6-202ENST00000621378 795 ntTSL 2 BASIC16.78■□□□□ 0.28
SNX4O95219 AC005906.2-206ENST00000638180 1029 ntTSL 5 BASIC16.78■□□□□ 0.28
SNX4O95219 FO681492.1-201ENST00000623662 5321 ntAPPRIS P5 TSL 2 BASIC16.78■□□□□ 0.28
SNX4O95219 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
SNX4O95219 LINC00472-203ENST00000426635 2958 ntTSL 2 BASIC16.78■□□□□ 0.28
SNX4O95219 ADGRB2-202ENST00000373658 5414 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
SNX4O95219 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
SNX4O95219 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC16.78■□□□□ 0.28
SNX4O95219 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
SNX4O95219 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
SNX4O95219 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
SNX4O95219 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
SNX4O95219 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
SNX4O95219 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC16.77■□□□□ 0.28
SNX4O95219 RELL2-201ENST00000297164 2520 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
SNX4O95219 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC16.77■□□□□ 0.28
SNX4O95219 FAM50A-202ENST00000393600 1352 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
SNX4O95219 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC16.77■□□□□ 0.28
SNX4O95219 TCAF2-203ENST00000425618 2448 ntTSL 2 BASIC16.77■□□□□ 0.28
SNX4O95219 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
SNX4O95219 ASL-204ENST00000395331 1538 ntTSL 5 BASIC16.77■□□□□ 0.28
SNX4O95219 FAM208A-209ENST00000493960 5600 ntAPPRIS P2 TSL 5 BASIC16.77■□□□□ 0.28
SNX4O95219 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
SNX4O95219 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
SNX4O95219 POU4F3-201ENST00000230732 1182 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
SNX4O95219 ZFAND2A-201ENST00000316495 860 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
SNX4O95219 PARK7-201ENST00000338639 949 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
SNX4O95219 ZFAND2A-203ENST00000401903 968 ntTSL 3 BASIC16.77■□□□□ 0.28
SNX4O95219 PDZD7-203ENST00000470414 1057 ntTSL 2 BASIC16.77■□□□□ 0.28
SNX4O95219 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC16.77■□□□□ 0.28
SNX4O95219 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC16.77■□□□□ 0.28
SNX4O95219 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
SNX4O95219 NRBP2-202ENST00000442628 3587 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.28
SNX4O95219 PILRB-208ENST00000452089 2099 ntAPPRIS P2 TSL 2 BASIC16.77■□□□□ 0.27
SNX4O95219 ZNF264-202ENST00000536056 2078 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
SNX4O95219 SWAP70-202ENST00000447399 3538 ntTSL 2 BASIC16.77■□□□□ 0.27
SNX4O95219 FTCDNL1-204ENST00000622774 1997 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
SNX4O95219 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.27
SNX4O95219 ATXN2-201ENST00000377617 4702 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.27
SNX4O95219 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC16.77■□□□□ 0.27
SNX4O95219 AGPAT2-201ENST00000371694 1391 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
SNX4O95219 FAM135A-205ENST00000418814 6415 ntTSL 5 BASIC16.76■□□□□ 0.27
SNX4O95219 BMPER-201ENST00000297161 5031 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
SNX4O95219 YAP1-209ENST00000537274 5350 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
SNX4O95219 OSMR-202ENST00000502536 1740 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
SNX4O95219 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
SNX4O95219 ERO1A-201ENST00000395686 5285 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
SNX4O95219 RASSF8-AS1-202ENST00000500276 2610 ntTSL 2 BASIC16.76■□□□□ 0.27
SNX4O95219 RND2-202ENST00000587250 4147 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
SNX4O95219 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
SNX4O95219 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC16.76■□□□□ 0.27
SNX4O95219 TMEM88-201ENST00000301599 875 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
SNX4O95219 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC16.76■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 40.5 ms