Protein–RNA interactions for Protein: O75365

PTP4A3, Protein tyrosine phosphatase type IVA 3, humanhuman

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A3O75365 CCDC112-205ENST00000506442 2145 ntAPPRIS ALT2 TSL 2 BASIC16.07■□□□□ 0.16
PTP4A3O75365 FBXO7-201ENST00000266087 2195 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
PTP4A3O75365 KCNJ2-AS1-201ENST00000590966 2442 ntBASIC16.07■□□□□ 0.16
PTP4A3O75365 SLC2A6-202ENST00000371899 2528 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
PTP4A3O75365 CD24-204ENST00000619133 2513 ntAPPRIS P3 TSL 2 BASIC16.07■□□□□ 0.16
PTP4A3O75365 DOCK7-203ENST00000404627 2678 ntTSL 2 BASIC16.07■□□□□ 0.16
PTP4A3O75365 AC133785.1-201ENST00000429282 2824 ntTSL 2 BASIC16.07■□□□□ 0.16
PTP4A3O75365 ZNF281-203ENST00000367353 3080 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
PTP4A3O75365 VSTM2A-204ENST00000407838 3112 ntAPPRIS P1 TSL 3 BASIC16.07■□□□□ 0.16
PTP4A3O75365 RNF112-201ENST00000461366 3212 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
PTP4A3O75365 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
PTP4A3O75365 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
PTP4A3O75365 TRAM1-201ENST00000262213 2785 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
PTP4A3O75365 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
PTP4A3O75365 PRCC-201ENST00000271526 2105 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
PTP4A3O75365 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
PTP4A3O75365 KRT8-201ENST00000293308 1882 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
PTP4A3O75365 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC16.06■□□□□ 0.16
PTP4A3O75365 ACP2-206ENST00000529444 1719 ntTSL 2 BASIC16.06■□□□□ 0.16
PTP4A3O75365 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC16.06■□□□□ 0.16
PTP4A3O75365 ARPC1B-201ENST00000252725 1551 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
PTP4A3O75365 TMED3-201ENST00000299705 1475 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
PTP4A3O75365 BTBD1-202ENST00000379403 1467 ntTSL 5 BASIC16.06■□□□□ 0.16
PTP4A3O75365 SMIM24-201ENST00000215531 1329 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
PTP4A3O75365 TNNI3-201ENST00000344887 840 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
PTP4A3O75365 NDUFA1-201ENST00000371437 766 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
PTP4A3O75365 COX11P1-201ENST00000489116 835 ntBASIC16.06■□□□□ 0.16
PTP4A3O75365 DYNLL1-205ENST00000548342 662 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
PTP4A3O75365 AC010203.1-204ENST00000548782 407 ntBASIC16.06■□□□□ 0.16
PTP4A3O75365 SLC39A11-207ENST00000579732 1004 ntTSL 2 BASIC16.06■□□□□ 0.16
PTP4A3O75365 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC16.06■□□□□ 0.16
PTP4A3O75365 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
PTP4A3O75365 AC004263.2-201ENST00000617183 678 ntBASIC16.06■□□□□ 0.16
PTP4A3O75365 TBXAS1-210ENST00000458722 2057 ntTSL 2 BASIC16.06■□□□□ 0.16
PTP4A3O75365 NOL4L-205ENST00000375678 2042 ntAPPRIS ALT2 TSL 2 BASIC16.06■□□□□ 0.16
PTP4A3O75365 FTSJ1-201ENST00000019019 1986 ntAPPRIS ALT1 TSL 2 BASIC16.06■□□□□ 0.16
PTP4A3O75365 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
PTP4A3O75365 MCM7-203ENST00000354230 2975 ntTSL 2 BASIC16.05■□□□□ 0.16
PTP4A3O75365 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
PTP4A3O75365 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
PTP4A3O75365 DDX51-202ENST00000397333 4718 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
PTP4A3O75365 AL512625.1-201ENST00000305709 2541 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
PTP4A3O75365 BAGE2-202ENST00000474011 1482 ntTSL 2 BASIC16.05■□□□□ 0.16
PTP4A3O75365 RPL3-201ENST00000216146 1442 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
PTP4A3O75365 GPRC5B-201ENST00000300571 5213 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
PTP4A3O75365 ARFIP2-204ENST00000445086 1300 ntTSL 2 BASIC16.05■□□□□ 0.16
PTP4A3O75365 GBX2-203ENST00000551105 1307 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
PTP4A3O75365 PTGES2-214ENST00000617202 1344 ntTSL 5 BASIC16.05■□□□□ 0.16
PTP4A3O75365 CHTOP-203ENST00000368690 2165 ntAPPRIS ALT1 TSL 1 (best) BASIC16.05■□□□□ 0.16
PTP4A3O75365 PARK7-201ENST00000338639 949 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
PTP4A3O75365 GUCA2B-201ENST00000372581 597 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
PTP4A3O75365 OARD1-201ENST00000373154 1129 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
PTP4A3O75365 PAX3-208ENST00000409828 1254 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
PTP4A3O75365 KRT18P48-201ENST00000434763 852 ntBASIC16.05■□□□□ 0.16
PTP4A3O75365 AC099669.1-201ENST00000457331 456 ntTSL 3 BASIC16.05■□□□□ 0.16
PTP4A3O75365 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
PTP4A3O75365 RTL8B-201ENST00000391440 2026 ntAPPRIS P1 BASIC16.05■□□□□ 0.16
PTP4A3O75365 CTNNB1-210ENST00000453024 2841 ntTSL 2 BASIC16.05■□□□□ 0.16
PTP4A3O75365 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC16.05■□□□□ 0.16
PTP4A3O75365 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
PTP4A3O75365 DHCR7-201ENST00000355527 2666 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
PTP4A3O75365 CLEC18B-206ENST00000620745 1847 ntTSL 5 BASIC16.05■□□□□ 0.16
PTP4A3O75365 SLC9A6-208ENST00000636206 4711 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
PTP4A3O75365 ZNF211-201ENST00000240731 2440 ntAPPRIS P4 TSL 2 BASIC16.05■□□□□ 0.16
PTP4A3O75365 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
PTP4A3O75365 COL9A1-201ENST00000320755 3059 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
PTP4A3O75365 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC16.05■□□□□ 0.16
PTP4A3O75365 LMBR1L-204ENST00000547382 2235 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
PTP4A3O75365 CLDN11-201ENST00000064724 2169 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
PTP4A3O75365 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
PTP4A3O75365 WNT8A-204ENST00000506684 1543 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
PTP4A3O75365 DCP1B-201ENST00000280665 2086 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
PTP4A3O75365 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
PTP4A3O75365 ZNF302-202ENST00000446502 2635 ntAPPRIS ALT2 TSL 2 BASIC16.04■□□□□ 0.16
PTP4A3O75365 C6orf203-202ENST00000405204 1420 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
PTP4A3O75365 GAL3ST4-201ENST00000360039 2537 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
PTP4A3O75365 AC022211.2-201ENST00000585075 2527 ntBASIC16.04■□□□□ 0.16
PTP4A3O75365 EIF5A-204ENST00000416016 1336 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
PTP4A3O75365 AC090340.1-201ENST00000620778 4980 ntBASIC16.04■□□□□ 0.16
PTP4A3O75365 TTC8-202ENST00000345383 2329 ntTSL 5 BASIC16.04■□□□□ 0.16
PTP4A3O75365 STRADA-254ENST00000640999 2336 ntAPPRIS ALT1 TSL 5 BASIC16.04■□□□□ 0.16
PTP4A3O75365 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
PTP4A3O75365 AC098829.1-201ENST00000502344 630 ntTSL 3 BASIC16.04■□□□□ 0.16
PTP4A3O75365 AC112698.1-201ENST00000510299 916 ntBASIC16.04■□□□□ 0.16
PTP4A3O75365 AC011558.1-201ENST00000623459 338 ntBASIC16.04■□□□□ 0.16
PTP4A3O75365 OSGIN1-202ENST00000361711 2230 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
PTP4A3O75365 AC003002.1-202ENST00000596755 1743 ntAPPRIS P1 BASIC16.04■□□□□ 0.16
PTP4A3O75365 DLG4-201ENST00000302955 3184 ntAPPRIS P3 TSL 5 BASIC16.04■□□□□ 0.16
PTP4A3O75365 DLG4-202ENST00000399506 3185 ntAPPRIS ALT1 TSL 2 BASIC16.04■□□□□ 0.16
PTP4A3O75365 TADA1-201ENST00000367874 2159 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
PTP4A3O75365 PDE2A-226ENST00000544570 3119 ntTSL 5 BASIC16.04■□□□□ 0.16
PTP4A3O75365 PSENEN-202ENST00000587708 1661 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
PTP4A3O75365 BCL2-203ENST00000589955 5011 ntBASIC16.04■□□□□ 0.16
PTP4A3O75365 MAP4K2-202ENST00000377350 2931 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
PTP4A3O75365 EIF2AK3-201ENST00000303236 4646 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
PTP4A3O75365 SEMA3B-204ENST00000433753 2755 ntAPPRIS ALT1 TSL 1 (best) BASIC16.04■□□□□ 0.16
PTP4A3O75365 VPS51-201ENST00000279281 2714 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
PTP4A3O75365 LTV1-201ENST00000367576 1847 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
PTP4A3O75365 TAB2-209ENST00000637181 4230 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
PTP4A3O75365 GATA6-201ENST00000269216 3770 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 26 ms