Protein–RNA interactions for Protein: O60890

OPHN1, Oligophrenin-1, humanhuman

Predictions only

Length 802 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
OPHN1O60890 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
OPHN1O60890 LINC01168-201ENST00000461291 5254 ntTSL 2 BASIC18.62■□□□□ 0.57
OPHN1O60890 C6orf132-201ENST00000341865 6210 ntAPPRIS P2 TSL 5 BASIC18.62■□□□□ 0.57
OPHN1O60890 UNC13A-206ENST00000552293 5314 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
OPHN1O60890 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
OPHN1O60890 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
OPHN1O60890 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
OPHN1O60890 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
OPHN1O60890 PLD3-207ENST00000409735 2140 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
OPHN1O60890 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC18.61■□□□□ 0.57
OPHN1O60890 STK4-201ENST00000372801 2038 ntTSL 2 BASIC18.61■□□□□ 0.57
OPHN1O60890 MYBPH-201ENST00000255416 1805 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
OPHN1O60890 ZBTB7C-201ENST00000535628 4818 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
OPHN1O60890 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
OPHN1O60890 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
OPHN1O60890 BCL11A-209ENST00000489516 1508 ntTSL 5 BASIC18.61■□□□□ 0.57
OPHN1O60890 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
OPHN1O60890 PFN1-201ENST00000225655 1291 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
OPHN1O60890 CYB561D2-201ENST00000232508 1225 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
OPHN1O60890 TMEM234-202ENST00000344461 721 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
OPHN1O60890 SUV39H2-202ENST00000354919 1233 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
OPHN1O60890 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
OPHN1O60890 SELENOH-204ENST00000534355 818 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
OPHN1O60890 AP000721.2-201ENST00000537170 650 ntTSL 4 BASIC18.61■□□□□ 0.57
OPHN1O60890 RPL28-210ENST00000560583 1204 ntTSL 2 BASIC18.61■□□□□ 0.57
OPHN1O60890 MIR3180-1-201ENST00000580374 94 ntBASIC18.61■□□□□ 0.57
OPHN1O60890 MIR3180-3-201ENST00000584616 94 ntBASIC18.61■□□□□ 0.57
OPHN1O60890 PARP12-201ENST00000263549 3796 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
OPHN1O60890 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
OPHN1O60890 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
OPHN1O60890 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
OPHN1O60890 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC18.61■□□□□ 0.57
OPHN1O60890 LRRC32-202ENST00000404995 2656 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
OPHN1O60890 GOSR1-201ENST00000225724 6039 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
OPHN1O60890 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC18.61■□□□□ 0.57
OPHN1O60890 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
OPHN1O60890 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
OPHN1O60890 ENTPD2-202ENST00000355097 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
OPHN1O60890 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
OPHN1O60890 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC18.6■□□□□ 0.57
OPHN1O60890 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
OPHN1O60890 NOL4L-211ENST00000621426 6577 ntAPPRIS P2 TSL 5 BASIC18.6■□□□□ 0.57
OPHN1O60890 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
OPHN1O60890 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
OPHN1O60890 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
OPHN1O60890 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
OPHN1O60890 NID1-202ENST00000366595 5412 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
OPHN1O60890 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC18.6■□□□□ 0.57
OPHN1O60890 YBEY-201ENST00000329319 1019 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
OPHN1O60890 PSMA7-203ENST00000370873 996 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
OPHN1O60890 YBEY-206ENST00000397701 744 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
OPHN1O60890 AP000347.1-202ENST00000435868 847 ntBASIC18.6■□□□□ 0.57
OPHN1O60890 NUS1P1-201ENST00000446295 882 ntBASIC18.6■□□□□ 0.57
OPHN1O60890 UNC93B7-201ENST00000509439 705 ntBASIC18.6■□□□□ 0.57
OPHN1O60890 CCNG1-208ENST00000510664 994 ntTSL 5 BASIC18.6■□□□□ 0.57
OPHN1O60890 REEP1-209ENST00000541910 969 ntTSL 2 BASIC18.6■□□□□ 0.57
OPHN1O60890 MNT-208ENST00000575394 606 ntTSL 4 BASIC18.6■□□□□ 0.57
OPHN1O60890 MIR3917-201ENST00000580971 93 ntBASIC18.6■□□□□ 0.57
OPHN1O60890 AC022150.1-201ENST00000599222 640 ntTSL 3 BASIC18.6■□□□□ 0.57
OPHN1O60890 AL365255.1-201ENST00000637702 847 ntTSL 2 BASIC18.6■□□□□ 0.57
OPHN1O60890 CACNA2D2-201ENST00000266039 5476 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
OPHN1O60890 BEND4-202ENST00000504360 8692 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
OPHN1O60890 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
OPHN1O60890 BAZ1B-201ENST00000339594 6102 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
OPHN1O60890 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC18.6■□□□□ 0.57
OPHN1O60890 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
OPHN1O60890 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
OPHN1O60890 MEN1-203ENST00000337652 3162 ntAPPRIS P3 TSL 5 BASIC18.6■□□□□ 0.57
OPHN1O60890 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
OPHN1O60890 TMEM128-201ENST00000254742 1737 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
OPHN1O60890 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
OPHN1O60890 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
OPHN1O60890 UBQLN4-201ENST00000368309 3576 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
OPHN1O60890 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
OPHN1O60890 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC18.6■□□□□ 0.57
OPHN1O60890 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
OPHN1O60890 ZDHHC4-205ENST00000396713 1552 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
OPHN1O60890 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
OPHN1O60890 RIF1-204ENST00000430328 7992 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
OPHN1O60890 NTRK2-206ENST00000376213 5560 ntAPPRIS ALT1 TSL 5 BASIC18.59■□□□□ 0.57
OPHN1O60890 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC18.59■□□□□ 0.57
OPHN1O60890 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
OPHN1O60890 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
OPHN1O60890 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
OPHN1O60890 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC18.59■□□□□ 0.57
OPHN1O60890 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
OPHN1O60890 SP100-208ENST00000427101 1922 ntTSL 2 BASIC18.59■□□□□ 0.57
OPHN1O60890 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
OPHN1O60890 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
OPHN1O60890 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
OPHN1O60890 AC093734.1-201ENST00000416100 242 ntTSL 3 BASIC18.59■□□□□ 0.57
OPHN1O60890 PTPRF-209ENST00000438120 6377 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
OPHN1O60890 LINC02237-202ENST00000521904 477 ntTSL 3 BASIC18.59■□□□□ 0.57
OPHN1O60890 NUTF2-205ENST00000568396 1179 ntAPPRIS P1 TSL 3 BASIC18.59■□□□□ 0.57
OPHN1O60890 SYNGR2-202ENST00000585591 949 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
OPHN1O60890 AP002414.4-201ENST00000589764 1148 ntBASIC18.59■□□□□ 0.57
OPHN1O60890 GPALPP1-207ENST00000611650 899 ntBASIC18.59■□□□□ 0.57
OPHN1O60890 CALM2-209ENST00000628793 1103 ntTSL 5 BASIC18.59■□□□□ 0.57
OPHN1O60890 HHATL-201ENST00000310417 1750 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
OPHN1O60890 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 61 ms