Protein–RNA interactions for Protein: O43805

SSNA1, Sjoegren syndrome nuclear autoantigen 1, humanhuman

Predictions only

Length 119 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSNA1O43805 RAP2CP1-201ENST00000605103 478 ntBASIC15.22■□□□□ 0.03
SSNA1O43805 PTCRA-204ENST00000616441 1125 ntAPPRIS ALT2 TSL 2 BASIC15.22■□□□□ 0.03
SSNA1O43805 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
SSNA1O43805 NIN-203ENST00000382041 6496 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
SSNA1O43805 LZTR1-201ENST00000215739 4572 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
SSNA1O43805 RPN1-201ENST00000296255 2314 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
SSNA1O43805 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC15.22■□□□□ 0.03
SSNA1O43805 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
SSNA1O43805 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC15.22■□□□□ 0.03
SSNA1O43805 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
SSNA1O43805 TRIM71-201ENST00000383763 8685 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
SSNA1O43805 B3GNT4-206ENST00000546192 2749 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
SSNA1O43805 AMZ2P1-202ENST00000430983 3425 ntTSL 2 BASIC15.21■□□□□ 0.03
SSNA1O43805 HFE2-201ENST00000336751 2234 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.03
SSNA1O43805 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
SSNA1O43805 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
SSNA1O43805 HTR7P1-201ENST00000538670 1336 ntBASIC15.21■□□□□ 0.03
SSNA1O43805 INHBB-201ENST00000295228 3204 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
SSNA1O43805 SCN3B-201ENST00000299333 5665 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
SSNA1O43805 DHFR-201ENST00000439211 3917 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
SSNA1O43805 AC026691.1-201ENST00000602502 2017 ntBASIC15.21■□□□□ 0.03
SSNA1O43805 SGPP2-201ENST00000321276 3336 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
SSNA1O43805 LAT2-201ENST00000275635 1869 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
SSNA1O43805 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC15.21■□□□□ 0.03
SSNA1O43805 SUV39H1-202ENST00000376687 2871 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
SSNA1O43805 FAM104A-202ENST00000405159 2865 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
SSNA1O43805 DACT1-202ENST00000395153 3734 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
SSNA1O43805 EPB41-205ENST00000373797 2402 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
SSNA1O43805 GPR158-AS1-201ENST00000449643 2433 ntTSL 2 BASIC15.21■□□□□ 0.03
SSNA1O43805 GCSH-209ENST00000639689 2412 ntTSL 5 BASIC15.21■□□□□ 0.03
SSNA1O43805 UXT-201ENST00000333119 574 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
SSNA1O43805 BET1L-204ENST00000410108 637 ntTSL 3 BASIC15.21■□□□□ 0.03
SSNA1O43805 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
SSNA1O43805 AC005829.2-201ENST00000571422 1056 ntBASIC15.21■□□□□ 0.03
SSNA1O43805 ABTB1-201ENST00000232744 1965 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
SSNA1O43805 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
SSNA1O43805 SYTL3-202ENST00000360448 2504 ntAPPRIS ALT1 TSL 5 BASIC15.21■□□□□ 0.03
SSNA1O43805 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC15.21■□□□□ 0.03
SSNA1O43805 TNIP1-202ENST00000389378 2935 ntAPPRIS ALT2 TSL 2 BASIC15.21■□□□□ 0.03
SSNA1O43805 PRRX1-202ENST00000367760 2217 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
SSNA1O43805 ACSF3-204ENST00000406948 2247 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.03
SSNA1O43805 ZSCAN2-214ENST00000546148 2242 ntAPPRIS P2 TSL 2 BASIC15.21■□□□□ 0.03
SSNA1O43805 OPA1-204ENST00000361828 6381 ntAPPRIS ALT1 TSL 5 BASIC15.21■□□□□ 0.03
SSNA1O43805 AL162586.1-201ENST00000439298 2055 ntTSL 2 BASIC15.21■□□□□ 0.03
SSNA1O43805 SURF6-201ENST00000372022 4447 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
SSNA1O43805 KIF21A-202ENST00000361961 6601 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
SSNA1O43805 C15orf61-201ENST00000342683 4253 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
SSNA1O43805 NR6A1-205ENST00000487099 7031 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
SSNA1O43805 SH2B1-203ENST00000359285 3033 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
SSNA1O43805 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.02
SSNA1O43805 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC15.21■□□□□ 0.02
SSNA1O43805 SP100-208ENST00000427101 1922 ntTSL 2 BASIC15.21■□□□□ 0.02
SSNA1O43805 RBM12-201ENST00000359646 5332 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
SSNA1O43805 CRY1-201ENST00000008527 3267 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
SSNA1O43805 ASIC1-201ENST00000228468 4072 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
SSNA1O43805 AC011473.4-202ENST00000250366 1602 ntAPPRIS P5 TSL 2 BASIC15.21■□□□□ 0.02
SSNA1O43805 DDX42-208ENST00000578681 4337 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
SSNA1O43805 IQCE-212ENST00000476665 2400 ntAPPRIS ALT2 TSL 2 BASIC15.21■□□□□ 0.02
SSNA1O43805 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
SSNA1O43805 PLXDC1-201ENST00000315392 6252 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
SSNA1O43805 CRTC3-201ENST00000268184 2537 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
SSNA1O43805 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
SSNA1O43805 KCNJ8-201ENST00000240662 2389 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
SSNA1O43805 MYB-203ENST00000341911 3672 ntAPPRIS ALT1 TSL 1 (best) BASIC15.2■□□□□ 0.02
SSNA1O43805 SDC4-201ENST00000372733 2613 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
SSNA1O43805 BRF1-206ENST00000446501 2858 ntTSL 2 BASIC15.2■□□□□ 0.02
SSNA1O43805 EDC3-214ENST00000568176 1825 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
SSNA1O43805 RIMS1-216ENST00000521978 5079 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
SSNA1O43805 ADGRA1-202ENST00000392607 4283 ntAPPRIS P2 TSL 5 BASIC15.2■□□□□ 0.02
SSNA1O43805 SOWAHB-201ENST00000334306 3220 ntAPPRIS P1 BASIC15.2■□□□□ 0.02
SSNA1O43805 HYAL3-201ENST00000336307 1942 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
SSNA1O43805 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
SSNA1O43805 CSNK1A1L-201ENST00000379800 2406 ntAPPRIS P1 BASIC15.2■□□□□ 0.02
SSNA1O43805 MIF-201ENST00000215754 939 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
SSNA1O43805 AK1-201ENST00000223836 736 ntTSL 3 BASIC15.2■□□□□ 0.02
SSNA1O43805 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
SSNA1O43805 UCN-201ENST00000296099 795 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
SSNA1O43805 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
SSNA1O43805 TSPY4-201ENST00000383008 1143 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
SSNA1O43805 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
SSNA1O43805 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC15.2■□□□□ 0.02
SSNA1O43805 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC15.2■□□□□ 0.02
SSNA1O43805 AL031432.3-201ENST00000607698 485 ntBASIC15.2■□□□□ 0.02
SSNA1O43805 BID-214ENST00000617586 542 ntTSL 5 BASIC15.2■□□□□ 0.02
SSNA1O43805 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC15.2■□□□□ 0.02
SSNA1O43805 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
SSNA1O43805 GCFC2-202ENST00000409857 2516 ntTSL 5 BASIC15.2■□□□□ 0.02
SSNA1O43805 LAT-203ENST00000395456 1616 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
SSNA1O43805 LRRTM1-202ENST00000409148 2126 ntAPPRIS P1 TSL 4 BASIC15.2■□□□□ 0.02
SSNA1O43805 TFR2-202ENST00000431692 2631 ntTSL 5 BASIC15.2■□□□□ 0.02
SSNA1O43805 CDKN1A-204ENST00000448526 2104 ntAPPRIS P1 TSL 3 BASIC15.2■□□□□ 0.02
SSNA1O43805 CPEB2-209ENST00000538197 6878 ntAPPRIS P4 TSL 5 BASIC15.2■□□□□ 0.02
SSNA1O43805 ADAM15-205ENST00000360674 2732 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
SSNA1O43805 PIGX-202ENST00000392391 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
SSNA1O43805 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
SSNA1O43805 TRIM7-201ENST00000274773 2840 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
SSNA1O43805 DLG4-201ENST00000302955 3184 ntAPPRIS P3 TSL 5 BASIC15.2■□□□□ 0.02
SSNA1O43805 DLG4-202ENST00000399506 3185 ntAPPRIS ALT1 TSL 2 BASIC15.2■□□□□ 0.02
SSNA1O43805 NPAS2-201ENST00000335681 4007 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
SSNA1O43805 ASB10-201ENST00000275838 1820 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 92.8 ms