Protein–RNA interactions for Protein: O43707

ACTN4, Alpha-actinin-4, humanhuman

Known RBP Predictions only

Length 911 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4O43707 SPRED3-201ENST00000338502 4778 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
ACTN4O43707 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC20■□□□□ 0.79
ACTN4O43707 ATP2A3-201ENST00000309890 4826 ntTSL 5 BASIC20■□□□□ 0.79
ACTN4O43707 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
ACTN4O43707 EVI5L-202ENST00000538904 2418 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
ACTN4O43707 RSBN1-205ENST00000615321 2418 ntTSL 2 BASIC20■□□□□ 0.79
ACTN4O43707 GDF5-202ENST00000374372 2572 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
ACTN4O43707 PROSER2-201ENST00000277570 3333 ntAPPRIS P2 TSL 1 (best) BASIC19.99■□□□□ 0.79
ACTN4O43707 TMEM175-201ENST00000264771 1860 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
ACTN4O43707 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC19.99■□□□□ 0.79
ACTN4O43707 AC133548.2-201ENST00000568567 2605 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
ACTN4O43707 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
ACTN4O43707 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
ACTN4O43707 ATP6V0C-201ENST00000330398 1175 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
ACTN4O43707 PRICKLE4-202ENST00000394260 1035 ntAPPRIS ALT2 TSL 2 BASIC19.99■□□□□ 0.79
ACTN4O43707 PRICKLE4-203ENST00000394263 1155 ntAPPRIS P2 TSL 5 BASIC19.99■□□□□ 0.79
ACTN4O43707 IMP3-202ENST00000403490 1237 ntAPPRIS P1 BASIC19.99■□□□□ 0.79
ACTN4O43707 AC012618.3-202ENST00000440004 472 ntTSL 4 BASIC19.99■□□□□ 0.79
ACTN4O43707 AL359075.1-203ENST00000462729 1002 ntBASIC19.99■□□□□ 0.79
ACTN4O43707 WDR45-218ENST00000473974 1077 ntTSL 5 BASIC19.99■□□□□ 0.79
ACTN4O43707 AP003733.1-201ENST00000491725 852 ntBASIC19.99■□□□□ 0.79
ACTN4O43707 AZIN1-AS1-215ENST00000522939 644 ntTSL 2 BASIC19.99■□□□□ 0.79
ACTN4O43707 ABHD14B-208ENST00000525795 980 ntAPPRIS P1 TSL 3 BASIC19.99■□□□□ 0.79
ACTN4O43707 SPEG-225ENST00000617028 815 ntTSL 5 BASIC19.99■□□□□ 0.79
ACTN4O43707 SLC39A1-211ENST00000621013 2322 ntAPPRIS P1 TSL 2 BASIC19.99■□□□□ 0.79
ACTN4O43707 CRADD-202ENST00000542893 1403 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
ACTN4O43707 RTKN2-203ENST00000395260 2076 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
ACTN4O43707 IL12RB2-202ENST00000371000 2454 ntTSL 2 BASIC19.99■□□□□ 0.79
ACTN4O43707 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC19.99■□□□□ 0.79
ACTN4O43707 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
ACTN4O43707 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC19.99■□□□□ 0.79
ACTN4O43707 FLT1-201ENST00000282397 7092 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
ACTN4O43707 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC19.99■□□□□ 0.79
ACTN4O43707 AQP5-201ENST00000293599 1450 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
ACTN4O43707 FAM9B-202ENST00000362066 2047 ntTSL 2 BASIC19.98■□□□□ 0.79
ACTN4O43707 KCNE3-201ENST00000310128 3143 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
ACTN4O43707 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
ACTN4O43707 CHEK2-202ENST00000348295 1771 ntTSL 5 BASIC19.98■□□□□ 0.79
ACTN4O43707 CARNS1-202ENST00000445895 3971 ntAPPRIS P1 TSL 5 BASIC19.98■□□□□ 0.79
ACTN4O43707 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC19.98■□□□□ 0.79
ACTN4O43707 AL353692.3-201ENST00000407031 1396 ntBASIC19.98■□□□□ 0.79
ACTN4O43707 ZNF264-202ENST00000536056 2078 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
ACTN4O43707 PFKL-201ENST00000349048 2912 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
ACTN4O43707 MIOX-202ENST00000395732 1658 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
ACTN4O43707 AC112907.2-201ENST00000448639 330 ntBASIC19.98■□□□□ 0.79
ACTN4O43707 AC087623.2-201ENST00000528407 534 ntTSL 4 BASIC19.98■□□□□ 0.79
ACTN4O43707 FAM181A-203ENST00000556222 1162 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
ACTN4O43707 FGF14-AS2-201ENST00000606448 1074 ntBASIC19.98■□□□□ 0.79
ACTN4O43707 DDX1-207ENST00000617198 2257 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
ACTN4O43707 ERLEC1-201ENST00000185150 2433 ntAPPRIS P3 TSL 1 (best) BASIC19.98■□□□□ 0.79
ACTN4O43707 RGS14-201ENST00000408923 2415 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
ACTN4O43707 PTCHD3-202ENST00000622555 1720 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
ACTN4O43707 DDIT4L-201ENST00000273990 2604 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
ACTN4O43707 AC012313.1-201ENST00000593393 3059 ntBASIC19.98■□□□□ 0.79
ACTN4O43707 BCAR1-201ENST00000162330 3221 ntAPPRIS P3 TSL 1 (best) BASIC19.98■□□□□ 0.79
ACTN4O43707 VPS37D-202ENST00000451519 1303 ntTSL 5 BASIC19.98■□□□□ 0.79
ACTN4O43707 ARID1B-203ENST00000350026 7962 ntAPPRIS P3 TSL 1 (best) BASIC19.98■□□□□ 0.79
ACTN4O43707 LRRC23-209ENST00000443597 1628 ntAPPRIS P4 TSL 1 (best) BASIC19.98■□□□□ 0.79
ACTN4O43707 DKK1-201ENST00000373970 1790 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
ACTN4O43707 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC19.97■□□□□ 0.79
ACTN4O43707 GCSH-209ENST00000639689 2412 ntTSL 5 BASIC19.97■□□□□ 0.79
ACTN4O43707 PCBP4-203ENST00000428823 1835 ntTSL 5 BASIC19.97■□□□□ 0.79
ACTN4O43707 GGPS1-206ENST00000488594 1396 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
ACTN4O43707 DCHS2-201ENST00000339452 5064 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
ACTN4O43707 VSIG10L2-202ENST00000638636 2304 ntAPPRIS P1 TSL 5 BASIC19.97■□□□□ 0.79
ACTN4O43707 TFAP2E-201ENST00000373235 2189 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
ACTN4O43707 NOL4L-205ENST00000375678 2042 ntAPPRIS ALT2 TSL 2 BASIC19.97■□□□□ 0.79
ACTN4O43707 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
ACTN4O43707 ACP2-206ENST00000529444 1719 ntTSL 2 BASIC19.97■□□□□ 0.79
ACTN4O43707 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
ACTN4O43707 MAZ-212ENST00000568282 1593 ntTSL 5 BASIC19.97■□□□□ 0.79
ACTN4O43707 SDCBP2-201ENST00000339987 1404 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
ACTN4O43707 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
ACTN4O43707 DDT-203ENST00000403754 569 ntTSL 3 BASIC19.97■□□□□ 0.79
ACTN4O43707 DDT-206ENST00000430101 573 ntTSL 2 BASIC19.97■□□□□ 0.79
ACTN4O43707 DGUOK-AS1-203ENST00000453103 601 ntTSL 3 BASIC19.97■□□□□ 0.79
ACTN4O43707 HOMER2P1-201ENST00000455653 964 ntBASIC19.97■□□□□ 0.79
ACTN4O43707 AC099669.1-201ENST00000457331 456 ntTSL 3 BASIC19.97■□□□□ 0.79
ACTN4O43707 FNDC5-205ENST00000496770 837 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
ACTN4O43707 OAF-202ENST00000531220 815 ntAPPRIS ALT2 TSL 3 BASIC19.97■□□□□ 0.79
ACTN4O43707 ISCU-208ENST00000539593 1071 ntTSL 2 BASIC19.97■□□□□ 0.79
ACTN4O43707 CDKN3-209ENST00000556102 938 ntTSL 5 BASIC19.97■□□□□ 0.79
ACTN4O43707 ZNF444P1-201ENST00000559497 298 ntBASIC19.97■□□□□ 0.79
ACTN4O43707 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC19.97■□□□□ 0.79
ACTN4O43707 GPR32P1-201ENST00000601788 811 ntBASIC19.97■□□□□ 0.79
ACTN4O43707 PRKAR1B-204ENST00000406797 2553 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
ACTN4O43707 PTGDR-201ENST00000306051 2942 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
ACTN4O43707 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
ACTN4O43707 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
ACTN4O43707 GRAMD1B-214ENST00000635736 2814 ntAPPRIS P1 TSL 5 BASIC19.97■□□□□ 0.79
ACTN4O43707 FRRS1L-201ENST00000561981 8197 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
ACTN4O43707 SLC29A2-206ENST00000546034 2509 ntAPPRIS P1 TSL 5 BASIC19.97■□□□□ 0.79
ACTN4O43707 RTL8B-201ENST00000391440 2026 ntAPPRIS P1 BASIC19.97■□□□□ 0.79
ACTN4O43707 CYP2W1-202ENST00000340150 2361 ntTSL 2 BASIC19.97■□□□□ 0.79
ACTN4O43707 ARHGAP22-205ENST00000417912 2352 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
ACTN4O43707 PABPC1L-201ENST00000217073 1851 ntAPPRIS P1 TSL 5 BASIC19.96■□□□□ 0.79
ACTN4O43707 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
ACTN4O43707 TMCO1-207ENST00000580248 1735 ntTSL 2 BASIC19.96■□□□□ 0.79
ACTN4O43707 IGF2-207ENST00000434045 1583 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
ACTN4O43707 ARHGAP27-214ENST00000532891 2604 ntAPPRIS ALT2 TSL 5 BASIC19.96■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 67.1 ms